CuGenDBv2

Gene ID	Spg008091
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Vacuolar protein sorting-associated protein 18-like protein
Genome location	scaffold4:7379835..7381651
RNA-Seq Expression	Spg008091
Synteny	Spg008091
Gene Ontology terms	GO:0006886 - intracellular protein transport (biological process) GO:0006904 - vesicle docking involved in exocytosis (biological process) GO:0007032 - endosome organization (biological process) GO:0007033 - vacuole organization (biological process) GO:0010015 - root morphogenesis (biological process) GO:0048284 - organelle fusion (biological process) GO:0009705 - plant-type vacuole membrane (cellular component) GO:0030897 - HOPS complex (cellular component) GO:0033263 - CORVET complex (cellular component) GO:0030674 - protein binding, bridging (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0031599.1 vacuolar protein sorting-associated protein 18-like protein [Cucumis melo var. makuwa]

1.3e-20

94.44

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Query:  MDSGRPAFTVDLLERYAAKGRGVISCMAAGNDVILLGTSKGWVTRYDFGVGDSI
        M+ GRPAFTVDLLERYAAKGRGVISCMAAGNDVI+LGTSKGWVTRYDFGVGDSI
Subjt:  MDSGRPAFTVDLLERYAAKGRGVISCMAAGNDVILLGTSKGWVTRYDFGVGDSI

TYK07051.1 vacuolar protein sorting-associated protein 18-like protein [Cucumis melo var. makuwa]

1.3e-20

94.44

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Query:  MDSGRPAFTVDLLERYAAKGRGVISCMAAGNDVILLGTSKGWVTRYDFGVGDSI
        M+ GRPAFTVDLLERYAAKGRGVISCMAAGNDVI+LGTSKGWVTRYDFGVGDSI
Subjt:  MDSGRPAFTVDLLERYAAKGRGVISCMAAGNDVILLGTSKGWVTRYDFGVGDSI

XP_004136806.1 vacuolar sorting protein 18 [Cucumis sativus]

1.3e-20

94.44

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Query:  MDSGRPAFTVDLLERYAAKGRGVISCMAAGNDVILLGTSKGWVTRYDFGVGDSI
        M+ GRPAFTVDLLERYAAKGRGVISCMAAGNDVI+LGTSKGWVTRYDFGVGDSI
Subjt:  MDSGRPAFTVDLLERYAAKGRGVISCMAAGNDVILLGTSKGWVTRYDFGVGDSI

XP_008455352.1 PREDICTED: LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 18 homolog [Cucumis melo]

1.3e-20

94.44

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Query:  MDSGRPAFTVDLLERYAAKGRGVISCMAAGNDVILLGTSKGWVTRYDFGVGDSI
        M+ GRPAFTVDLLERYAAKGRGVISCMAAGNDVI+LGTSKGWVTRYDFGVGDSI
Subjt:  MDSGRPAFTVDLLERYAAKGRGVISCMAAGNDVILLGTSKGWVTRYDFGVGDSI

XP_023511653.1 vacuolar protein sorting-associated protein 18 homolog [Cucurbita pepo subsp. pepo]

1.7e-20

94.44

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Query:  MDSGRPAFTVDLLERYAAKGRGVISCMAAGNDVILLGTSKGWVTRYDFGVGDSI
        MD GRPAFTVDLLERYAAKGRGVISCM+AGNDVILLGTSKGWVTRYDFG+GDSI
Subjt:  MDSGRPAFTVDLLERYAAKGRGVISCMAAGNDVILLGTSKGWVTRYDFGVGDSI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K5N6 Pep3_Vps18 domain-containing protein

6.4e-21

94.44

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Query:  MDSGRPAFTVDLLERYAAKGRGVISCMAAGNDVILLGTSKGWVTRYDFGVGDSI
        M+ GRPAFTVDLLERYAAKGRGVISCMAAGNDVI+LGTSKGWVTRYDFGVGDSI
Subjt:  MDSGRPAFTVDLLERYAAKGRGVISCMAAGNDVILLGTSKGWVTRYDFGVGDSI

A0A1S3C0V2 LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 18 homolog

6.4e-21

94.44

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Query:  MDSGRPAFTVDLLERYAAKGRGVISCMAAGNDVILLGTSKGWVTRYDFGVGDSI
        M+ GRPAFTVDLLERYAAKGRGVISCMAAGNDVI+LGTSKGWVTRYDFGVGDSI
Subjt:  MDSGRPAFTVDLLERYAAKGRGVISCMAAGNDVILLGTSKGWVTRYDFGVGDSI

A0A5A7SQQ7 Vacuolar protein sorting-associated protein 18-like protein

6.4e-21

94.44

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Query:  MDSGRPAFTVDLLERYAAKGRGVISCMAAGNDVILLGTSKGWVTRYDFGVGDSI
        M+ GRPAFTVDLLERYAAKGRGVISCMAAGNDVI+LGTSKGWVTRYDFGVGDSI
Subjt:  MDSGRPAFTVDLLERYAAKGRGVISCMAAGNDVILLGTSKGWVTRYDFGVGDSI

A0A5D3C570 Vacuolar protein sorting-associated protein 18-like protein

6.4e-21

94.44

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Query:  MDSGRPAFTVDLLERYAAKGRGVISCMAAGNDVILLGTSKGWVTRYDFGVGDSI
        M+ GRPAFTVDLLERYAAKGRGVISCMAAGNDVI+LGTSKGWVTRYDFGVGDSI
Subjt:  MDSGRPAFTVDLLERYAAKGRGVISCMAAGNDVILLGTSKGWVTRYDFGVGDSI

A0A6J1HZJ9 vacuolar protein sorting-associated protein 18 homolog

8.3e-21

94.44

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Query:  MDSGRPAFTVDLLERYAAKGRGVISCMAAGNDVILLGTSKGWVTRYDFGVGDSI
        MD GRPAFTVDLLERYAAKGRGVISCM+AGNDVILLGTSKGWVTRYDFG+GDSI
Subjt:  MDSGRPAFTVDLLERYAAKGRGVISCMAAGNDVILLGTSKGWVTRYDFGVGDSI

SwissProt top hits

e value

%identity

Alignment

F4IDS7 Vacuolar sorting protein 18

3.7e-18

77.36

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Query:  MDSGRPAFTVDLLERYAAKGRGVISCMAAGNDVILLGTSKGWVTRYDFGVGDS
        MD GR  F+VDLLERYA K RG+I+CMAAGNDVI+LGTSKGW+ RYDFGVG S
Subjt:  MDSGRPAFTVDLLERYAAKGRGVISCMAAGNDVILLGTSKGWVTRYDFGVGDS

Arabidopsis top hits

e value

%identity

Alignment

AT1G12470.1 zinc ion binding

2.7e-19

77.36

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Query:  MDSGRPAFTVDLLERYAAKGRGVISCMAAGNDVILLGTSKGWVTRYDFGVGDS
        MD GR  F+VDLLERYA K RG+I+CMAAGNDVI+LGTSKGW+ RYDFGVG S
Subjt:  MDSGRPAFTVDLLERYAAKGRGVISCMAAGNDVILLGTSKGWVTRYDFGVGDS

Sequences

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CDS sequence

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ATGGATATGGACACGAGACACGGATATGACACGACACGGACACGCGGTTCGAACCACACAATTGGTATCAGCAACAAGCCTCAAGTACCTGGACATGGTTATCATGCTCG
ATTCCGGACGGCGAACACCGCCGTCGGTGGTCCAGAGAGAACAAAAGAAACAACAATCGCTGTTATTAGAGTCGTGCAAGCTTCTGTAGCCGGTGAAAATGGCCTTGAAC
AGATAGTTCCCAGAAGGAATAGGGTTTTTCGATCTGTGCCGAGTCTTCTGGGTTTGAGTCGTGGAAGCTTCTGTAGCTGTAATACGGATTTGTCTGGCCCGAAACTTGAA
CTCTCTGAGCTTCGAGAAATGGATTCAGGGAGGCCGGCGTTCACCGTCGATCTTCTAGAAAGGTATGCGGCCAAAGGGAGGGGAGTTATCAGCTGCATGGCCGCTGGGAA
TGATGTCATTTTGTTAGGCACCAGCAAAGGTTGGGTCACCCGCTATGACTTTGGAGTTGGAGACTCGATCGGTATGATTCTCCATCTTCTGCTAATTACTTGTATGCGAT
CTAATCTAATTACTTTTGGACAATCGAAAAGGTTTGGCTCGATCGTTTATGTTTTTGTGTTGGGATATCATTTCGCCTAA

mRNA sequence

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Protein sequence

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MDMDTRHGYDTTRTRGSNHTIGISNKPQVPGHGYHARFRTANTAVGGPERTKETTIAVIRVVQASVAGENGLEQIVPRRNRVFRSVPSLLGLSRGSFCSCNTDLSGPKLE
LSELREMDSGRPAFTVDLLERYAAKGRGVISCMAAGNDVILLGTSKGWVTRYDFGVGDSIGMILHLLLITCMRSNLITFGQSKRFGSIVYVFVLGYHFA

Spg008091 (gene) of Sponge gourd (cylindrica) v1 genome