; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg008109 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008109
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationscaffold1:53957823..53959864
RNA-Seq ExpressionSpg008109
SyntenySpg008109
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046606.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.4e-3026.95Show/hide
Query:  DELSTMLQWVEQTQLKHGDNLPYKSLVSSSFSSQVQIIANELGELKAIWEGLTPERRFLFSKRYGHIADLMY----------------------------
        D    + QW E  QLK G + P K  V    + Q+  I N L ELK++WE L PE+R  F+K YG I DL+Y                            
Subjt:  DELSTMLQWVEQTQLKHGDNLPYKSLVSSSFSSQVQIIANELGELKAIWEGLTPERRFLFSKRYGHIADLMY----------------------------

Query:  -------------------------------------------IPEVQKNVKVKGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPRIKGYVD
                                                     E++K +K K     I  +YL  LAR  +  + GL L+ALCIYG V++PRIKGYV+
Subjt:  -------------------------------------------IPEVQKNVKVKGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPRIKGYVD

Query:  GDVLKIFFSIEQGVDPAIPLLAETVRALNYFRRINGNSHSEGVTPEYLQW---------RIKRCKIPITTRDNVGESFNRAVDKPNQ-----LATERKEL
         +V+KIF  IE+GV+P IP++AET R+LN+  RI G        P    W           KR ++ +   ++   +    V K N+     +A   +E+
Subjt:  GDVLKIFFSIEQGVDPAIPLLAETVRALNYFRRINGNSHSEGVTPEYLQW---------RIKRCKIPITTRDNVGESFNRAVDKPNQ-----LATERKEL

Query:  VGRNQTLKLE-------------------NEKLQQEVKRLMNQLQAFRRASEQLSLKRGQLEEQYSSLRGDYAIMREDMQII-------LGKVNQTMNTI
          +   + +E                   N  LQ+ V    +QL   R+A + ++    QL E+Y  +  D+ + +++ + +       +G++ +    +
Subjt:  VGRNQTLKLE-------------------NEKLQQEVKRLMNQLQAFRRASEQLSLKRGQLEEQYSSLRGDYAIMREDMQII-------LGKVNQTMNTI

Query:  KIMARRARGFAEWATDLRENTSSMASNAEELFEFLGMIRRDLGYFGHFH
        + MAR A  F+  A  LR+         +EL  FLG+I + LG F  +H
Subjt:  KIMARRARGFAEWATDLRENTSSMASNAEELFEFLGMIRRDLGYFGHFH

KAA0056623.1 girdin-like [Cucumis melo var. makuwa]9.1e-3838.82Show/hide
Query:  ANVPVESIRSSSSEYDELSTMLQWVEQTQLKHGDNLPYKSLVSSSFSSQVQIIANELGELKAIWEGLTPERRFLFSKRYGHIADLMYI------------
        +N+ + S  S  S++DE S +L+W E+ Q K GD +   S +S     Q+    N+L  LK IWE LTP+RRF+FSK+YGHIA+LMYI            
Subjt:  ANVPVESIRSSSSEYDELSTMLQWVEQTQLKHGDNLPYKSLVSSSFSSQVQIIANELGELKAIWEGLTPERRFLFSKRYGHIADLMYI------------

Query:  -------------------------------------------------PEVQKNVKVKGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPRI
                                                          E+QK +KVKG EE++  DYL ++ + +I+E+KGL LLALCIYG V++P+ 
Subjt:  -------------------------------------------------PEVQKNVKVKGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPRI

Query:  KGYVDGDVLKIFFSIEQGVDPAIPLLAETVRALNYFR
        +GYVDG V+K+FF +E+GV+P IP+LA+T R+LNY R
Subjt:  KGYVDGDVLKIFFSIEQGVDPAIPLLAETVRALNYFR

KAA0060423.1 uncharacterized protein E6C27_scaffold22G002420 [Cucumis melo var. makuwa]2.4e-3835.45Show/hide
Query:  SSSSEYDELSTMLQWVEQTQLKHGDNLPYKSLVSSSFSSQVQIIANELGELKAIWEGLTPERRFLFSKRYGHIADLMYIP--------------------
        S  S++DE S +L+W E+ Q K GD++   S +S     Q+    N+L  LK IWE LTP+RRF+FSK+YGHI +LMYIP                    
Subjt:  SSSSEYDELSTMLQWVEQTQLKHGDNLPYKSLVSSSFSSQVQIIANELGELKAIWEGLTPERRFLFSKRYGHIADLMYIP--------------------

Query:  ---------------------------------------------------EVQKNVKVKGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPR
                                                           E+QK +K+KG EE++  DYL ++ + +++E+KGL LLALCIYG V++P+
Subjt:  ---------------------------------------------------EVQKNVKVKGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPR

Query:  IKGYVDGDVLKIFFSIEQGVDPAIPLLAETVRALNYFRRINGNSHSEGVTPEYLQWRIKRCKIPITTR
         +GYVDG V+K+FF +E+GV+P IP+LAET R+LNY R   G        P    W     K P   R
Subjt:  IKGYVDGDVLKIFFSIEQGVDPAIPLLAETVRALNYFRRINGNSHSEGVTPEYLQWRIKRCKIPITTR

KAA0066094.1 girdin-like [Cucumis melo var. makuwa]2.8e-3126.97Show/hide
Query:  SSSSEYDELSTMLQWVEQTQLKHGDNLPYKSLVSSSFSSQVQIIANELGELKAIWEGLTPERRFLFSKRYGHIADLMYIP--------------------
        S  S++DE S +L+W E+ Q K GD +   S +S     Q+    N+L  LK IWE LTP+RRF+FSK+YGHIA+LMYIP                    
Subjt:  SSSSEYDELSTMLQWVEQTQLKHGDNLPYKSLVSSSFSSQVQIIANELGELKAIWEGLTPERRFLFSKRYGHIADLMYIP--------------------

Query:  ---------------------------------------------------EVQKNVKVKGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPR
                                                           ++QK +KVKG EE++  DYL ++ + +++E+KGL LLALCIYG V++P+
Subjt:  ---------------------------------------------------EVQKNVKVKGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPR

Query:  IKGYVDGDVLKI----FFSI----------------------EQGVDPAIPL---------------LAETVRALNYFRRINGNSHSEGVTPEYLQWRIK
         +GYVDG  +      F S+                      +Q + P   L                 + V A    R+I    H EGVT  Y  W+  
Subjt:  IKGYVDGDVLKI----FFSI----------------------EQGVDPAIPL---------------LAETVRALNYFRRINGNSHSEGVTPEYLQWRIK

Query:  RCK-IPITTRDNVGESFNRAVDKPNQLATERKELVGRNQTLKLENEKLQQEVKRLMNQLQAFRRASEQLSLKRGQLEEQYSSLRGDYAIMREDMQIILGK
        R K I   +R+ V      + ++PNQ   +  EL  +N+ L+ ENEKL++E  + M+     +   E    K     +    L  D   + ++M+  + K
Subjt:  RCK-IPITTRDNVGESFNRAVDKPNQLATERKELVGRNQTLKLENEKLQQEVKRLMNQLQAFRRASEQLSLKRGQLEEQYSSLRGDYAIMREDMQIILGK

Query:  VNQTMNTIKIMARRARGFA-EWATDLRENTSSMASNAEELFEFLG
         N+++   K   +   G   E+  DL            +L   +G
Subjt:  VNQTMNTIKIMARRARGFA-EWATDLRENTSSMASNAEELFEFLG

TYK07552.1 girdin-like [Cucumis melo var. makuwa]1.4e-3836.82Show/hide
Query:  SSSSEYDELSTMLQWVEQTQLKHGDNLPYKSLVSSSFSSQVQIIANELGELKAIWEGLTPERRFLFSKRYGHIADLMYIP--------------------
        S  S++DE S +L+W E+ Q K GD +   S +S     Q+    N+L  LK IWE LTP+RRF+FSK+YGHIA+LMY P                    
Subjt:  SSSSEYDELSTMLQWVEQTQLKHGDNLPYKSLVSSSFSSQVQIIANELGELKAIWEGLTPERRFLFSKRYGHIADLMYIP--------------------

Query:  -----------------------------------------EVQKNVKVKGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPRIKGYVDGDVL
                                                 E+QK +KVK  EE++  DYL ++ + +I+E+KGL LLALCIYG V++P+ +GYVDG V+
Subjt:  -----------------------------------------EVQKNVKVKGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPRIKGYVDGDVL

Query:  KIFFSIEQGVDPAIPLLAETVRALNYFRRINGNSHSEGVTPEYLQWRIKRCKIPITTR
        K+FF +E+GV+P IP+LA+T R+LNY+R   G        P    W     K P   R
Subjt:  KIFFSIEQGVDPAIPLLAETVRALNYFRRINGNSHSEGVTPEYLQWRIKRCKIPITTR

TrEMBL top hitse value%identityAlignment
A0A5A7TXA1 Glial fibrillary acidic protein-like1.2e-3026.95Show/hide
Query:  DELSTMLQWVEQTQLKHGDNLPYKSLVSSSFSSQVQIIANELGELKAIWEGLTPERRFLFSKRYGHIADLMY----------------------------
        D    + QW E  QLK G + P K  V    + Q+  I N L ELK++WE L PE+R  F+K YG I DL+Y                            
Subjt:  DELSTMLQWVEQTQLKHGDNLPYKSLVSSSFSSQVQIIANELGELKAIWEGLTPERRFLFSKRYGHIADLMY----------------------------

Query:  -------------------------------------------IPEVQKNVKVKGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPRIKGYVD
                                                     E++K +K K     I  +YL  LAR  +  + GL L+ALCIYG V++PRIKGYV+
Subjt:  -------------------------------------------IPEVQKNVKVKGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPRIKGYVD

Query:  GDVLKIFFSIEQGVDPAIPLLAETVRALNYFRRINGNSHSEGVTPEYLQW---------RIKRCKIPITTRDNVGESFNRAVDKPNQ-----LATERKEL
         +V+KIF  IE+GV+P IP++AET R+LN+  RI G        P    W           KR ++ +   ++   +    V K N+     +A   +E+
Subjt:  GDVLKIFFSIEQGVDPAIPLLAETVRALNYFRRINGNSHSEGVTPEYLQW---------RIKRCKIPITTRDNVGESFNRAVDKPNQ-----LATERKEL

Query:  VGRNQTLKLE-------------------NEKLQQEVKRLMNQLQAFRRASEQLSLKRGQLEEQYSSLRGDYAIMREDMQII-------LGKVNQTMNTI
          +   + +E                   N  LQ+ V    +QL   R+A + ++    QL E+Y  +  D+ + +++ + +       +G++ +    +
Subjt:  VGRNQTLKLE-------------------NEKLQQEVKRLMNQLQAFRRASEQLSLKRGQLEEQYSSLRGDYAIMREDMQII-------LGKVNQTMNTI

Query:  KIMARRARGFAEWATDLRENTSSMASNAEELFEFLGMIRRDLGYFGHFH
        + MAR A  F+  A  LR+         +EL  FLG+I + LG F  +H
Subjt:  KIMARRARGFAEWATDLRENTSSMASNAEELFEFLGMIRRDLGYFGHFH

A0A5A7UL51 Girdin-like4.4e-3838.82Show/hide
Query:  ANVPVESIRSSSSEYDELSTMLQWVEQTQLKHGDNLPYKSLVSSSFSSQVQIIANELGELKAIWEGLTPERRFLFSKRYGHIADLMYI------------
        +N+ + S  S  S++DE S +L+W E+ Q K GD +   S +S     Q+    N+L  LK IWE LTP+RRF+FSK+YGHIA+LMYI            
Subjt:  ANVPVESIRSSSSEYDELSTMLQWVEQTQLKHGDNLPYKSLVSSSFSSQVQIIANELGELKAIWEGLTPERRFLFSKRYGHIADLMYI------------

Query:  -------------------------------------------------PEVQKNVKVKGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPRI
                                                          E+QK +KVKG EE++  DYL ++ + +I+E+KGL LLALCIYG V++P+ 
Subjt:  -------------------------------------------------PEVQKNVKVKGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPRI

Query:  KGYVDGDVLKIFFSIEQGVDPAIPLLAETVRALNYFR
        +GYVDG V+K+FF +E+GV+P IP+LA+T R+LNY R
Subjt:  KGYVDGDVLKIFFSIEQGVDPAIPLLAETVRALNYFR

A0A5A7UWQ6 Uncharacterized protein1.2e-3835.45Show/hide
Query:  SSSSEYDELSTMLQWVEQTQLKHGDNLPYKSLVSSSFSSQVQIIANELGELKAIWEGLTPERRFLFSKRYGHIADLMYIP--------------------
        S  S++DE S +L+W E+ Q K GD++   S +S     Q+    N+L  LK IWE LTP+RRF+FSK+YGHI +LMYIP                    
Subjt:  SSSSEYDELSTMLQWVEQTQLKHGDNLPYKSLVSSSFSSQVQIIANELGELKAIWEGLTPERRFLFSKRYGHIADLMYIP--------------------

Query:  ---------------------------------------------------EVQKNVKVKGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPR
                                                           E+QK +K+KG EE++  DYL ++ + +++E+KGL LLALCIYG V++P+
Subjt:  ---------------------------------------------------EVQKNVKVKGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPR

Query:  IKGYVDGDVLKIFFSIEQGVDPAIPLLAETVRALNYFRRINGNSHSEGVTPEYLQWRIKRCKIPITTR
         +GYVDG V+K+FF +E+GV+P IP+LAET R+LNY R   G        P    W     K P   R
Subjt:  IKGYVDGDVLKIFFSIEQGVDPAIPLLAETVRALNYFRRINGNSHSEGVTPEYLQWRIKRCKIPITTR

A0A5A7VFL0 Girdin-like1.4e-3126.97Show/hide
Query:  SSSSEYDELSTMLQWVEQTQLKHGDNLPYKSLVSSSFSSQVQIIANELGELKAIWEGLTPERRFLFSKRYGHIADLMYIP--------------------
        S  S++DE S +L+W E+ Q K GD +   S +S     Q+    N+L  LK IWE LTP+RRF+FSK+YGHIA+LMYIP                    
Subjt:  SSSSEYDELSTMLQWVEQTQLKHGDNLPYKSLVSSSFSSQVQIIANELGELKAIWEGLTPERRFLFSKRYGHIADLMYIP--------------------

Query:  ---------------------------------------------------EVQKNVKVKGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPR
                                                           ++QK +KVKG EE++  DYL ++ + +++E+KGL LLALCIYG V++P+
Subjt:  ---------------------------------------------------EVQKNVKVKGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPR

Query:  IKGYVDGDVLKI----FFSI----------------------EQGVDPAIPL---------------LAETVRALNYFRRINGNSHSEGVTPEYLQWRIK
         +GYVDG  +      F S+                      +Q + P   L                 + V A    R+I    H EGVT  Y  W+  
Subjt:  IKGYVDGDVLKI----FFSI----------------------EQGVDPAIPL---------------LAETVRALNYFRRINGNSHSEGVTPEYLQWRIK

Query:  RCK-IPITTRDNVGESFNRAVDKPNQLATERKELVGRNQTLKLENEKLQQEVKRLMNQLQAFRRASEQLSLKRGQLEEQYSSLRGDYAIMREDMQIILGK
        R K I   +R+ V      + ++PNQ   +  EL  +N+ L+ ENEKL++E  + M+     +   E    K     +    L  D   + ++M+  + K
Subjt:  RCK-IPITTRDNVGESFNRAVDKPNQLATERKELVGRNQTLKLENEKLQQEVKRLMNQLQAFRRASEQLSLKRGQLEEQYSSLRGDYAIMREDMQIILGK

Query:  VNQTMNTIKIMARRARGFA-EWATDLRENTSSMASNAEELFEFLG
         N+++   K   +   G   E+  DL            +L   +G
Subjt:  VNQTMNTIKIMARRARGFA-EWATDLRENTSSMASNAEELFEFLG

A0A5D3C8D9 Girdin-like6.8e-3936.82Show/hide
Query:  SSSSEYDELSTMLQWVEQTQLKHGDNLPYKSLVSSSFSSQVQIIANELGELKAIWEGLTPERRFLFSKRYGHIADLMYIP--------------------
        S  S++DE S +L+W E+ Q K GD +   S +S     Q+    N+L  LK IWE LTP+RRF+FSK+YGHIA+LMY P                    
Subjt:  SSSSEYDELSTMLQWVEQTQLKHGDNLPYKSLVSSSFSSQVQIIANELGELKAIWEGLTPERRFLFSKRYGHIADLMYIP--------------------

Query:  -----------------------------------------EVQKNVKVKGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPRIKGYVDGDVL
                                                 E+QK +KVK  EE++  DYL ++ + +I+E+KGL LLALCIYG V++P+ +GYVDG V+
Subjt:  -----------------------------------------EVQKNVKVKGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPRIKGYVDGDVL

Query:  KIFFSIEQGVDPAIPLLAETVRALNYFRRINGNSHSEGVTPEYLQWRIKRCKIPITTR
        K+FF +E+GV+P IP+LA+T R+LNY+R   G        P    W     K P   R
Subjt:  KIFFSIEQGVDPAIPLLAETVRALNYFRRINGNSHSEGVTPEYLQWRIKRCKIPITTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGCCAACGTACCCGTAGAGTCAATACGGTCATCTTCCTCTGAGTATGATGAGTTGAGTACTATGCTACAATGGGTAGAGCAGACACAACTAAAACATGGGGATAA
TCTGCCTTATAAAAGCCTCGTGTCATCATCCTTCTCAAGTCAAGTTCAAATCATTGCTAACGAGCTAGGAGAGCTAAAGGCCATTTGGGAAGGTTTAACGCCGGAAAGAA
GATTTTTGTTCTCAAAGAGATACGGCCATATTGCAGACCTCATGTACATTCCAGAAGTGCAGAAAAATGTGAAAGTGAAAGGGGTTGAAGAGTCTATATCTGCAGATTAT
CTAACAGAACTCGCTCGCAAGCACATAAATGAAGAAAAGGGCCTGGTTCTGTTAGCTTTGTGCATCTACGGGATGGTCTTGTATCCCAGAATTAAAGGATATGTGGATGG
CGATGTCTTGAAGATATTCTTCAGCATTGAGCAAGGGGTGGATCCAGCCATACCTCTTCTAGCGGAAACGGTTCGGGCGCTCAATTATTTTAGAAGGATAAATGGCAATA
GTCATTCTGAGGGAGTTACTCCAGAATATTTGCAATGGCGCATTAAGAGGTGCAAGATCCCAATTACGACTCGAGACAATGTGGGAGAATCATTTAATAGAGCAGTAGAT
AAGCCTAACCAGCTAGCGACAGAGCGGAAAGAGTTAGTGGGAAGAAATCAAACATTGAAGCTAGAAAATGAAAAGTTACAGCAAGAGGTCAAACGTTTGATGAACCAGCT
CCAAGCATTTCGAAGGGCAAGCGAACAGTTGTCACTAAAGAGAGGACAACTAGAGGAACAATACTCATCATTAAGGGGAGATTATGCCATTATGAGAGAAGACATGCAAA
TAATTCTTGGGAAAGTAAATCAAACCATGAACACTATCAAGATCATGGCTAGGAGAGCCCGAGGATTTGCAGAATGGGCAACGGATCTGCGAGAGAATACATCATCTATG
GCCTCTAATGCGGAGGAGTTGTTTGAGTTTTTAGGGATGATTCGTAGAGACCTTGGGTACTTTGGTCACTTTCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATGCCAACGTACCCGTAGAGTCAATACGGTCATCTTCCTCTGAGTATGATGAGTTGAGTACTATGCTACAATGGGTAGAGCAGACACAACTAAAACATGGGGATAA
TCTGCCTTATAAAAGCCTCGTGTCATCATCCTTCTCAAGTCAAGTTCAAATCATTGCTAACGAGCTAGGAGAGCTAAAGGCCATTTGGGAAGGTTTAACGCCGGAAAGAA
GATTTTTGTTCTCAAAGAGATACGGCCATATTGCAGACCTCATGTACATTCCAGAAGTGCAGAAAAATGTGAAAGTGAAAGGGGTTGAAGAGTCTATATCTGCAGATTAT
CTAACAGAACTCGCTCGCAAGCACATAAATGAAGAAAAGGGCCTGGTTCTGTTAGCTTTGTGCATCTACGGGATGGTCTTGTATCCCAGAATTAAAGGATATGTGGATGG
CGATGTCTTGAAGATATTCTTCAGCATTGAGCAAGGGGTGGATCCAGCCATACCTCTTCTAGCGGAAACGGTTCGGGCGCTCAATTATTTTAGAAGGATAAATGGCAATA
GTCATTCTGAGGGAGTTACTCCAGAATATTTGCAATGGCGCATTAAGAGGTGCAAGATCCCAATTACGACTCGAGACAATGTGGGAGAATCATTTAATAGAGCAGTAGAT
AAGCCTAACCAGCTAGCGACAGAGCGGAAAGAGTTAGTGGGAAGAAATCAAACATTGAAGCTAGAAAATGAAAAGTTACAGCAAGAGGTCAAACGTTTGATGAACCAGCT
CCAAGCATTTCGAAGGGCAAGCGAACAGTTGTCACTAAAGAGAGGACAACTAGAGGAACAATACTCATCATTAAGGGGAGATTATGCCATTATGAGAGAAGACATGCAAA
TAATTCTTGGGAAAGTAAATCAAACCATGAACACTATCAAGATCATGGCTAGGAGAGCCCGAGGATTTGCAGAATGGGCAACGGATCTGCGAGAGAATACATCATCTATG
GCCTCTAATGCGGAGGAGTTGTTTGAGTTTTTAGGGATGATTCGTAGAGACCTTGGGTACTTTGGTCACTTTCATTAA
Protein sequenceShow/hide protein sequence
MNANVPVESIRSSSSEYDELSTMLQWVEQTQLKHGDNLPYKSLVSSSFSSQVQIIANELGELKAIWEGLTPERRFLFSKRYGHIADLMYIPEVQKNVKVKGVEESISADY
LTELARKHINEEKGLVLLALCIYGMVLYPRIKGYVDGDVLKIFFSIEQGVDPAIPLLAETVRALNYFRRINGNSHSEGVTPEYLQWRIKRCKIPITTRDNVGESFNRAVD
KPNQLATERKELVGRNQTLKLENEKLQQEVKRLMNQLQAFRRASEQLSLKRGQLEEQYSSLRGDYAIMREDMQIILGKVNQTMNTIKIMARRARGFAEWATDLRENTSSM
ASNAEELFEFLGMIRRDLGYFGHFH