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Spg008166 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008166
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionseipin-1
Genome locationscaffold2:18025986..18026576
RNA-Seq ExpressionSpg008166
SyntenySpg008166
Gene Ontology termsGO:0006629 - lipid metabolic process (biological process)
GO:0009846 - pollen germination (biological process)
GO:0010162 - seed dormancy process (biological process)
GO:0010344 - seed oilbody biogenesis (biological process)
GO:0080155 - regulation of double fertilization forming a zygote and endosperm (biological process)
GO:0140042 - lipid droplet formation (biological process)
GO:0030176 - integral component of endoplasmic reticulum membrane (cellular component)
InterPro domainsIPR009617 - Seipin family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588277.1 Seipin-1, partial [Cucurbita argyrosperma subsp. sororia]1.2e-6876.6Show/hide
Query:  MDSDEELEQSSRLIPKPTDFFNKLVFLQADLIHNAISFLFAPISTLLSLISESFHRAEEAKSTVESAVRKSPSAVAHRLSLAVRRLSYGLVAAAFMCVVM
        MD D+EL+QS +LI KP+D FNK+VFLQADLI++AI+FL APISTLLSLISESF RAEEAKSTVE AVRKSPSAVAHR+ LAVRRLSYGLVAAAFMC+VM
Subjt:  MDSDEELEQSSRLIPKPTDFFNKLVFLQADLIHNAISFLFAPISTLLSLISESFHRAEEAKSTVESAVRKSPSAVAHRLSLAVRRLSYGLVAAAFMCVVM

Query:  LLLLVAAAGVGFLTIRLWIEEPVGLREKLSFDYTKARPRALFGVDYGSATKIKKKKNLGIPVGHTFSVSVVLLMPESEFNREVGVFQV
        +LLL  AA V  + IR WIEEPV  R  L+FDYT ARPRAL+GVDY    K KK KNLGIPVGHTFSVSV+LLMPES+FNR VGVFQ+
Subjt:  LLLLVAAAGVGFLTIRLWIEEPVGLREKLSFDYTKARPRALFGVDYGSATKIKKKKNLGIPVGHTFSVSVVLLMPESEFNREVGVFQV

KAG7022197.1 Seipin-1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-6876.6Show/hide
Query:  MDSDEELEQSSRLIPKPTDFFNKLVFLQADLIHNAISFLFAPISTLLSLISESFHRAEEAKSTVESAVRKSPSAVAHRLSLAVRRLSYGLVAAAFMCVVM
        MD D+EL+QS +LI KP+D FNK+VFLQADLI++AI+FL APISTLLSLISESF RAEEAKSTVE AVRKSPSAVAHR+ LAVRRLSYGLVAAAFMC+VM
Subjt:  MDSDEELEQSSRLIPKPTDFFNKLVFLQADLIHNAISFLFAPISTLLSLISESFHRAEEAKSTVESAVRKSPSAVAHRLSLAVRRLSYGLVAAAFMCVVM

Query:  LLLLVAAAGVGFLTIRLWIEEPVGLREKLSFDYTKARPRALFGVDYGSATKIKKKKNLGIPVGHTFSVSVVLLMPESEFNREVGVFQV
        +LLL  AA V  + IR WIEEPV  R  L+FDYT ARPRAL+GVDY    K KK KNLGIPVGHTFSVSV+LLMPES+FNR VGVFQ+
Subjt:  LLLLVAAAGVGFLTIRLWIEEPVGLREKLSFDYTKARPRALFGVDYGSATKIKKKKNLGIPVGHTFSVSVVLLMPESEFNREVGVFQV

XP_022933775.1 seipin-1 [Cucurbita moschata]2.5e-6977.13Show/hide
Query:  MDSDEELEQSSRLIPKPTDFFNKLVFLQADLIHNAISFLFAPISTLLSLISESFHRAEEAKSTVESAVRKSPSAVAHRLSLAVRRLSYGLVAAAFMCVVM
        MD D+EL+QS RLI KP+D FNK+VFLQADLI++AI+FL APISTLLSLISESF RAEEAKSTVE AVRKSPSAVAHR+ LAVRRLSYGLVAAAFMC+VM
Subjt:  MDSDEELEQSSRLIPKPTDFFNKLVFLQADLIHNAISFLFAPISTLLSLISESFHRAEEAKSTVESAVRKSPSAVAHRLSLAVRRLSYGLVAAAFMCVVM

Query:  LLLLVAAAGVGFLTIRLWIEEPVGLREKLSFDYTKARPRALFGVDYGSATKIKKKKNLGIPVGHTFSVSVVLLMPESEFNREVGVFQV
        +LLL  AA V  + IR WIEEPV  R  L+FDYT ARPRAL+GVDY    K KK KNLGIPVGHTFSVSV+LLMPES+FNR VGVFQ+
Subjt:  LLLLVAAAGVGFLTIRLWIEEPVGLREKLSFDYTKARPRALFGVDYGSATKIKKKKNLGIPVGHTFSVSVVLLMPESEFNREVGVFQV

XP_023005649.1 seipin-1 [Cucurbita maxima]3.6e-6875Show/hide
Query:  MDSDEELEQSSRLIPKPTDFFNKLVFLQADLIHNAISFLFAPISTLLSLISESFHRAEEAKSTVESAVRKSPSAVAHRLSLAVRRLSYGLVAAAFMCVVM
        MD D+EL++S RLI KP+D FNK+VF+QAD+I++AI+FL APISTLLSLISESFHRAEEAKSTVE AVRKSPSAVA+R+ LAVRRLSYGLVAAAFMC+VM
Subjt:  MDSDEELEQSSRLIPKPTDFFNKLVFLQADLIHNAISFLFAPISTLLSLISESFHRAEEAKSTVESAVRKSPSAVAHRLSLAVRRLSYGLVAAAFMCVVM

Query:  LLLLVAAAGVGFLTIRLWIEEPVGLREKLSFDYTKARPRALFGVDYGSATKIKKKKNLGIPVGHTFSVSVVLLMPESEFNREVGVFQV
         LLL  AA V  + IR WIEEPV  +  L+FDYT ARPRAL+GVDY    K KK KNLGIPVGHTFSVSV+LLMPES+FNR VGVFQ+
Subjt:  LLLLVAAAGVGFLTIRLWIEEPVGLREKLSFDYTKARPRALFGVDYGSATKIKKKKNLGIPVGHTFSVSVVLLMPESEFNREVGVFQV

XP_023520654.1 seipin-1 [Cucurbita pepo subsp. pepo]1.7e-7077.13Show/hide
Query:  MDSDEELEQSSRLIPKPTDFFNKLVFLQADLIHNAISFLFAPISTLLSLISESFHRAEEAKSTVESAVRKSPSAVAHRLSLAVRRLSYGLVAAAFMCVVM
        MD D+EL+QS RLI KP+D FNK+VFLQADLI++AI+FL APISTLLSLISESFHRAEEAKSTVE AVRKSPSAVAHR+ LAVRRLSYGLVAAAFMC++M
Subjt:  MDSDEELEQSSRLIPKPTDFFNKLVFLQADLIHNAISFLFAPISTLLSLISESFHRAEEAKSTVESAVRKSPSAVAHRLSLAVRRLSYGLVAAAFMCVVM

Query:  LLLLVAAAGVGFLTIRLWIEEPVGLREKLSFDYTKARPRALFGVDYGSATKIKKKKNLGIPVGHTFSVSVVLLMPESEFNREVGVFQV
        +LLL  AA V  + IR WIEEPV  R  L+FDYT ARPRAL+GVDY    K+KK KNLGIPVGHTFSVSV+LLMPES+FNR VGVFQ+
Subjt:  LLLLVAAAGVGFLTIRLWIEEPVGLREKLSFDYTKARPRALFGVDYGSATKIKKKKNLGIPVGHTFSVSVVLLMPESEFNREVGVFQV

TrEMBL top hitse value%identityAlignment
A0A0A0M367 Uncharacterized protein1.3e-6070.53Show/hide
Query:  MDSDEELEQSSRLIP--KPTDFFNKLVFLQADLIHNAISFLFAPISTLLSLISESFHRAEEAKSTVESAVRKSPSAVAHRLSLAVRRLSYGLVAAAFMCV
        MDSD ELE+ +R I   KPTDFFNKLVFLQADLI+NA+ F+ AP  TLLSL +ESF RAEE K TVESAVRKSPS VA R+ +A RR+SYG VAA  MC+
Subjt:  MDSDEELEQSSRLIP--KPTDFFNKLVFLQADLIHNAISFLFAPISTLLSLISESFHRAEEAKSTVESAVRKSPSAVAHRLSLAVRRLSYGLVAAAFMCV

Query:  VMLLLLVAAAGVGFLTIRLWIEEPVGLREKLSFDYTKARPRALFGVDYGSATKIKKKKNLGIPVGHTFSVSVVLLMPESEFNREVGVFQV
        VM+LLLV A GV  L IR WIEEPV ++EKL FDYT+ARPRALFG   G+  K+ KKKNLGIPVGHTF V VVLLMPES+FNRE GVFQ+
Subjt:  VMLLLLVAAAGVGFLTIRLWIEEPVGLREKLSFDYTKARPRALFGVDYGSATKIKKKKNLGIPVGHTFSVSVVLLMPESEFNREVGVFQV

A0A1S3B8L6 seipin-13.5e-6169.27Show/hide
Query:  MDSDEELEQSSR----LIPKPTDFFNKLVFLQADLIHNAISFLFAPISTLLSLISESFHRAEEAKSTVESAVRKSPSAVAHRLSLAVRRLSYGLVAAAFM
        MDSD +L++ +R     I KPTDFFNKLVFLQADLI+NA+ F+ AP STLLSL +ESF RAEE K TVESAVRKSPS VA R+ +AVRR+SYG VAA  M
Subjt:  MDSDEELEQSSR----LIPKPTDFFNKLVFLQADLIHNAISFLFAPISTLLSLISESFHRAEEAKSTVESAVRKSPSAVAHRLSLAVRRLSYGLVAAAFM

Query:  CVVMLLLLVAAAGVGFLTIRLWIEEPVGLREKLSFDYTKARPRALFGVDYGSATKIKKKKNLGIPVGHTFSVSVVLLMPESEFNREVGVFQV
        C+VM+LLL+ A GV  L IR WIEEPV ++EKL FDYT+ARPRALFG+  G+  K+ KKKNLGIPVGHTF V VVLLMPES+FNRE GVFQ+
Subjt:  CVVMLLLLVAAAGVGFLTIRLWIEEPVGLREKLSFDYTKARPRALFGVDYGSATKIKKKKNLGIPVGHTFSVSVVLLMPESEFNREVGVFQV

A0A6J1D9G7 seipin-14.9e-5563.3Show/hide
Query:  MDSDEELEQSSRLIPKPTDFFNKLVFLQADLIHNAISFLFAPISTLLSLISESFHRAEEAKSTVESAVRKSPSAVAHRLSLAVRRLSYGLVAAAFMCVVM
        MDSD+E E+S   IP PTDFFNKL+FL A+LI+ AI+F+ APISTLLSL+SESF  AEEAK +VESAVR++PS  A R+ LA RR+SYGL AAA +CV M
Subjt:  MDSDEELEQSSRLIPKPTDFFNKLVFLQADLIHNAISFLFAPISTLLSLISESFHRAEEAKSTVESAVRKSPSAVAHRLSLAVRRLSYGLVAAAFMCVVM

Query:  LLLLVAAAGVGFLTIRLWIEEPVGLREKLSFDYTKARPRALFGVDYGSATKIKKKKNLGIPVGHTFSVSVVLLMPESEFNREVGVFQV
        ++LL AAAG     +R W+EEPV +RE+L+FDYT+A+PRA+FG +        KK NLGIPVGH F+ SV+LLMPES+FNR VGVFQ+
Subjt:  LLLLVAAAGVGFLTIRLWIEEPVGLREKLSFDYTKARPRALFGVDYGSATKIKKKKNLGIPVGHTFSVSVVLLMPESEFNREVGVFQV

A0A6J1F5S3 seipin-11.2e-6977.13Show/hide
Query:  MDSDEELEQSSRLIPKPTDFFNKLVFLQADLIHNAISFLFAPISTLLSLISESFHRAEEAKSTVESAVRKSPSAVAHRLSLAVRRLSYGLVAAAFMCVVM
        MD D+EL+QS RLI KP+D FNK+VFLQADLI++AI+FL APISTLLSLISESF RAEEAKSTVE AVRKSPSAVAHR+ LAVRRLSYGLVAAAFMC+VM
Subjt:  MDSDEELEQSSRLIPKPTDFFNKLVFLQADLIHNAISFLFAPISTLLSLISESFHRAEEAKSTVESAVRKSPSAVAHRLSLAVRRLSYGLVAAAFMCVVM

Query:  LLLLVAAAGVGFLTIRLWIEEPVGLREKLSFDYTKARPRALFGVDYGSATKIKKKKNLGIPVGHTFSVSVVLLMPESEFNREVGVFQV
        +LLL  AA V  + IR WIEEPV  R  L+FDYT ARPRAL+GVDY    K KK KNLGIPVGHTFSVSV+LLMPES+FNR VGVFQ+
Subjt:  LLLLVAAAGVGFLTIRLWIEEPVGLREKLSFDYTKARPRALFGVDYGSATKIKKKKNLGIPVGHTFSVSVVLLMPESEFNREVGVFQV

A0A6J1KZV1 seipin-11.7e-6875Show/hide
Query:  MDSDEELEQSSRLIPKPTDFFNKLVFLQADLIHNAISFLFAPISTLLSLISESFHRAEEAKSTVESAVRKSPSAVAHRLSLAVRRLSYGLVAAAFMCVVM
        MD D+EL++S RLI KP+D FNK+VF+QAD+I++AI+FL APISTLLSLISESFHRAEEAKSTVE AVRKSPSAVA+R+ LAVRRLSYGLVAAAFMC+VM
Subjt:  MDSDEELEQSSRLIPKPTDFFNKLVFLQADLIHNAISFLFAPISTLLSLISESFHRAEEAKSTVESAVRKSPSAVAHRLSLAVRRLSYGLVAAAFMCVVM

Query:  LLLLVAAAGVGFLTIRLWIEEPVGLREKLSFDYTKARPRALFGVDYGSATKIKKKKNLGIPVGHTFSVSVVLLMPESEFNREVGVFQV
         LLL  AA V  + IR WIEEPV  +  L+FDYT ARPRAL+GVDY    K KK KNLGIPVGHTFSVSV+LLMPES+FNR VGVFQ+
Subjt:  LLLLVAAAGVGFLTIRLWIEEPVGLREKLSFDYTKARPRALFGVDYGSATKIKKKKNLGIPVGHTFSVSVVLLMPESEFNREVGVFQV

SwissProt top hitse value%identityAlignment
Q8L615 Seipin-38.6e-0936.84Show/hide
Query:  VRRLSYGLVAAAFMCVVMLLLLVAAAGVGFLTIRLWIEEPVGLREKLSFDYTKARPRALF------GVDYGSATK--IKKKKNLGIPVGHTFSVSVVLLM
        VRR+++GL  A ++ +++  LLV+A  +    I     EP+ ++E L+FDYTK+ P A        GV +G + K  I+  K  G+      +VS+ L  
Subjt:  VRRLSYGLVAAAFMCVVMLLLLVAAAGVGFLTIRLWIEEPVGLREKLSFDYTKARPRALF------GVDYGSATK--IKKKKNLGIPVGHTFSVSVVLLM

Query:  PESEFNREVGVFQV
        PESE+NR +G+FQV
Subjt:  PESEFNREVGVFQV

Q9FFD9 Seipin-11.4e-2741.3Show/hide
Query:  EQSSRL-IPKP--TDFFNKLVFLQADLIHNAISFLFAPISTLLSLISESFHRAEEAKSTVESAVRKSPSAVAHRLSLAVRRLSYGLVAAAFMCVVMLLLL
        EQ ++L IP+P   D+F  LV +QADLI+NA+  L +P      L+  S+ RA    S  E AV+++P+ +A      VRR  +G++ A  + +VM+L L
Subjt:  EQSSRL-IPKP--TDFFNKLVFLQADLIHNAISFLFAPISTLLSLISESFHRAEEAKSTVESAVRKSPSAVAHRLSLAVRRLSYGLVAAAFMCVVMLLLL

Query:  VAAAGVGFLTIRLWIEEPVGLREKLSFDYTKARPRALFGVDYGSATKIKKKKNLGIPVGHTFSVSVVLLMPESEFNREVGVFQV
        + A  +G   + L++E+PV +R++L FDYT+  P A+F  D       KKK++  +PVGH+  VS+VL MPESE NR +GVFQ+
Subjt:  VAAAGVGFLTIRLWIEEPVGLREKLSFDYTKARPRALFGVDYGSATKIKKKKNLGIPVGHTFSVSVVLLMPESEFNREVGVFQV

Arabidopsis top hitse value%identityAlignment
AT1G29760.1 Putative adipose-regulatory protein (Seipin)1.0e-0424.44Show/hide
Query:  FFNKLVFLQADLIHNAISFLFAPISTLLSLISESFHRAEEAKSTVESAVRKSPSAVAHRLSLAVRRLSYGLVAAAFMCVVMLLLLVAAAGVGFLTIRLWI
        F   L+     L+ N   F F P ST+         R       +   +         ++   V +  +G+  A ++ +V+  LLV++  +G   I    
Subjt:  FFNKLVFLQADLIHNAISFLFAPISTLLSLISESFHRAEEAKSTVESAVRKSPSAVAHRLSLAVRRLSYGLVAAAFMCVVMLLLLVAAAGVGFLTIRLWI

Query:  EEPVGLREKLSFDYTKARPRALF------GVDYGSATK----IKKKKNLG-IPVGHTFSVSVVLLMPESEFNREVGVFQV
        ++P  ++E L+FDYTK  P A        GV+   + K    + K + L  IP      + + + +PES +N+ +G+FQV
Subjt:  EEPVGLREKLSFDYTKARPRALF------GVDYGSATK----IKKKKNLG-IPVGHTFSVSVVLLMPESEFNREVGVFQV

AT2G34380.1 Putative adipose-regulatory protein (Seipin)6.1e-1036.84Show/hide
Query:  VRRLSYGLVAAAFMCVVMLLLLVAAAGVGFLTIRLWIEEPVGLREKLSFDYTKARPRALF------GVDYGSATK--IKKKKNLGIPVGHTFSVSVVLLM
        VRR+++GL  A ++ +++  LLV+A  +    I     EP+ ++E L+FDYTK+ P A        GV +G + K  I+  K  G+      +VS+ L  
Subjt:  VRRLSYGLVAAAFMCVVMLLLLVAAAGVGFLTIRLWIEEPVGLREKLSFDYTKARPRALF------GVDYGSATK--IKKKKNLGIPVGHTFSVSVVLLM

Query:  PESEFNREVGVFQV
        PESE+NR +G+FQV
Subjt:  PESEFNREVGVFQV

AT5G16460.1 Putative adipose-regulatory protein (Seipin)1.0e-2841.3Show/hide
Query:  EQSSRL-IPKP--TDFFNKLVFLQADLIHNAISFLFAPISTLLSLISESFHRAEEAKSTVESAVRKSPSAVAHRLSLAVRRLSYGLVAAAFMCVVMLLLL
        EQ ++L IP+P   D+F  LV +QADLI+NA+  L +P      L+  S+ RA    S  E AV+++P+ +A      VRR  +G++ A  + +VM+L L
Subjt:  EQSSRL-IPKP--TDFFNKLVFLQADLIHNAISFLFAPISTLLSLISESFHRAEEAKSTVESAVRKSPSAVAHRLSLAVRRLSYGLVAAAFMCVVMLLLL

Query:  VAAAGVGFLTIRLWIEEPVGLREKLSFDYTKARPRALFGVDYGSATKIKKKKNLGIPVGHTFSVSVVLLMPESEFNREVGVFQV
        + A  +G   + L++E+PV +R++L FDYT+  P A+F  D       KKK++  +PVGH+  VS+VL MPESE NR +GVFQ+
Subjt:  VAAAGVGFLTIRLWIEEPVGLREKLSFDYTKARPRALFGVDYGSATKIKKKKNLGIPVGHTFSVSVVLLMPESEFNREVGVFQV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCCGACGAAGAGCTCGAACAATCCAGCCGTCTAATCCCAAAACCGACCGATTTCTTCAACAAACTCGTATTCCTCCAAGCCGATTTGATCCACAACGCCATTTC
CTTCCTCTTCGCTCCGATCTCCACTCTCCTTTCCCTGATCTCGGAGTCATTCCACCGCGCAGAAGAGGCGAAATCCACCGTCGAGTCCGCCGTCCGAAAATCCCCCTCCG
CCGTCGCCCATCGGCTGAGCCTCGCCGTGAGAAGGCTGAGCTACGGCCTTGTCGCGGCGGCGTTCATGTGCGTCGTGATGCTCTTACTTCTGGTGGCGGCAGCGGGCGTC
GGCTTCCTGACGATTCGGTTATGGATCGAAGAGCCGGTGGGTTTGAGGGAGAAATTGAGCTTCGATTACACTAAAGCTCGCCCGAGGGCTTTGTTTGGAGTGGATTACGG
GAGTGCGACGAAGATAAAGAAGAAGAAGAATTTGGGGATTCCGGTAGGGCACACGTTCTCTGTATCTGTGGTTCTTCTGATGCCTGAATCTGAATTCAATCGGGAGGTTG
GGGTTTTTCAGGTAATTGATCGATTATGGATTTGCTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCCGACGAAGAGCTCGAACAATCCAGCCGTCTAATCCCAAAACCGACCGATTTCTTCAACAAACTCGTATTCCTCCAAGCCGATTTGATCCACAACGCCATTTC
CTTCCTCTTCGCTCCGATCTCCACTCTCCTTTCCCTGATCTCGGAGTCATTCCACCGCGCAGAAGAGGCGAAATCCACCGTCGAGTCCGCCGTCCGAAAATCCCCCTCCG
CCGTCGCCCATCGGCTGAGCCTCGCCGTGAGAAGGCTGAGCTACGGCCTTGTCGCGGCGGCGTTCATGTGCGTCGTGATGCTCTTACTTCTGGTGGCGGCAGCGGGCGTC
GGCTTCCTGACGATTCGGTTATGGATCGAAGAGCCGGTGGGTTTGAGGGAGAAATTGAGCTTCGATTACACTAAAGCTCGCCCGAGGGCTTTGTTTGGAGTGGATTACGG
GAGTGCGACGAAGATAAAGAAGAAGAAGAATTTGGGGATTCCGGTAGGGCACACGTTCTCTGTATCTGTGGTTCTTCTGATGCCTGAATCTGAATTCAATCGGGAGGTTG
GGGTTTTTCAGGTAATTGATCGATTATGGATTTGCTGGTGA
Protein sequenceShow/hide protein sequence
MDSDEELEQSSRLIPKPTDFFNKLVFLQADLIHNAISFLFAPISTLLSLISESFHRAEEAKSTVESAVRKSPSAVAHRLSLAVRRLSYGLVAAAFMCVVMLLLLVAAAGV
GFLTIRLWIEEPVGLREKLSFDYTKARPRALFGVDYGSATKIKKKKNLGIPVGHTFSVSVVLLMPESEFNREVGVFQVIDRLWICW