; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg008191 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008191
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationscaffold2:19151107..19153287
RNA-Seq ExpressionSpg008191
SyntenySpg008191
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ERM93404.1 hypothetical protein AMTR_s04947p00003620 [Amborella trichopoda]2.6e-2256.38Show/hide
Query:  QDYAAATFYNLNTGIVEPVIDANHFEFKPIMFQILQTIGQFSGLPNEDPHKHMKQFLRICNSFKLNGASNETLRLKLFPFPLQGNAEAEGNKSP
        ++YAA  F  LN GIV P I A  FE KP+MFQ+LQT+GQFSG+P EDPH H++ FL + +SFK+ G S E LRLKLFPF L+  A +  N  P
Subjt:  QDYAAATFYNLNTGIVEPVIDANHFEFKPIMFQILQTIGQFSGLPNEDPHKHMKQFLRICNSFKLNGASNETLRLKLFPFPLQGNAEAEGNKSP

ERM93434.1 hypothetical protein AMTR_s03373p00007640 [Amborella trichopoda]5.2e-2358.51Show/hide
Query:  QDYAAATFYNLNTGIVEPVIDANHFEFKPIMFQILQTIGQFSGLPNEDPHKHMKQFLRICNSFKLNGASNETLRLKLFPFPLQGNAEAEGNKSP
        ++YAA  F  LN+GIV P I A HFE KP+MFQ+LQT+GQF G P EDPH H++ FL + +SFKL G S E LRLKLFPF L+  A A  N  P
Subjt:  QDYAAATFYNLNTGIVEPVIDANHFEFKPIMFQILQTIGQFSGLPNEDPHKHMKQFLRICNSFKLNGASNETLRLKLFPFPLQGNAEAEGNKSP

XP_030478162.1 uncharacterized protein LOC115695219 [Cannabis sativa]2.0e-2259.57Show/hide
Query:  QDYAAATFYNLNTGIVEPVIDANHFEFKPIMFQILQTIGQFSGLPNEDPHKHMKQFLRICNSFKLNGASNETLRLKLFPFPLQGNAEAEGNKSP
        ++YAA  F  LN GIV P I A HFE KPIMFQ+LQT+GQF G P EDPH H+  FL + +SFKL G S E LRLKLFPF L+  A A  N  P
Subjt:  QDYAAATFYNLNTGIVEPVIDANHFEFKPIMFQILQTIGQFSGLPNEDPHKHMKQFLRICNSFKLNGASNETLRLKLFPFPLQGNAEAEGNKSP

XP_030497803.1 uncharacterized protein LOC115713460 [Cannabis sativa]8.9e-2358.51Show/hide
Query:  QDYAAATFYNLNTGIVEPVIDANHFEFKPIMFQILQTIGQFSGLPNEDPHKHMKQFLRICNSFKLNGASNETLRLKLFPFPLQGNAEAEGNKSP
        ++YAA  F  LN GIV P I A HFE KP+MFQ+LQT+GQF G P EDPH H++ FL + +SFKL G S E LRLKLFPF L+  A A  N  P
Subjt:  QDYAAATFYNLNTGIVEPVIDANHFEFKPIMFQILQTIGQFSGLPNEDPHKHMKQFLRICNSFKLNGASNETLRLKLFPFPLQGNAEAEGNKSP

XP_030508936.1 uncharacterized protein LOC115723589 [Cannabis sativa]8.9e-2358.51Show/hide
Query:  QDYAAATFYNLNTGIVEPVIDANHFEFKPIMFQILQTIGQFSGLPNEDPHKHMKQFLRICNSFKLNGASNETLRLKLFPFPLQGNAEAEGNKSP
        ++YAA  F  LN GIV P I A HFE KP+MFQ+LQT+GQF G P EDPH H++ FL + +SFKL G S E LRLKLFPF L+  A A  N  P
Subjt:  QDYAAATFYNLNTGIVEPVIDANHFEFKPIMFQILQTIGQFSGLPNEDPHKHMKQFLRICNSFKLNGASNETLRLKLFPFPLQGNAEAEGNKSP

TrEMBL top hitse value%identityAlignment
A0A061EW79 Retrotrans_gag domain-containing protein7.1e-1847.25Show/hide
Query:  QDYAAATFYNLNTGIVEPVIDANHFEFKPIMFQILQTIGQFSGLPNEDPHKHMKQFLRICNSFKLNGASNETLRLKLFPFPLQGNAEAEGN
        +DYA     NL++ I  P+I AN FE KP + Q++QT+ QF GLPN+DP+ H+  FL IC++FK NG +++ +RL+LFPF L+  A++  N
Subjt:  QDYAAATFYNLNTGIVEPVIDANHFEFKPIMFQILQTIGQFSGLPNEDPHKHMKQFLRICNSFKLNGASNETLRLKLFPFPLQGNAEAEGN

A0A6J1E251 uncharacterized protein LOC1110253024.5e-2047.9Show/hide
Query:  PPV-GDPLG---AQQRGARPNNV---------QQDYAAATFYNLNTGIVEPVIDANHFEFKPIMFQILQTIGQFSGLPNEDPHKHMKQFLRICNSFKLNG
        PPV GD  G   A + G  PN +          ++Y    F+NLN+GI  P+  A  FE KP+MFQILQT+GQF GL NEDP+ H+K F+ I N+F+L G
Subjt:  PPV-GDPLG---AQQRGARPNNV---------QQDYAAATFYNLNTGIVEPVIDANHFEFKPIMFQILQTIGQFSGLPNEDPHKHMKQFLRICNSFKLNG

Query:  ASNETLRLKLFPFPLQGNA
         S + LRLK+FPF L+  A
Subjt:  ASNETLRLKLFPFPLQGNA

U5CUI2 Retrotrans_gag domain-containing protein1.3e-2256.38Show/hide
Query:  QDYAAATFYNLNTGIVEPVIDANHFEFKPIMFQILQTIGQFSGLPNEDPHKHMKQFLRICNSFKLNGASNETLRLKLFPFPLQGNAEAEGNKSP
        ++YAA  F  LN GIV P I A  FE KP+MFQ+LQT+GQFSG+P EDPH H++ FL + +SFK+ G S E LRLKLFPF L+  A +  N  P
Subjt:  QDYAAATFYNLNTGIVEPVIDANHFEFKPIMFQILQTIGQFSGLPNEDPHKHMKQFLRICNSFKLNGASNETLRLKLFPFPLQGNAEAEGNKSP

U5CUK7 Uncharacterized protein2.5e-2358.51Show/hide
Query:  QDYAAATFYNLNTGIVEPVIDANHFEFKPIMFQILQTIGQFSGLPNEDPHKHMKQFLRICNSFKLNGASNETLRLKLFPFPLQGNAEAEGNKSP
        ++YAA  F  LN+GIV P I A HFE KP+MFQ+LQT+GQF G P EDPH H++ FL + +SFKL G S E LRLKLFPF L+  A A  N  P
Subjt:  QDYAAATFYNLNTGIVEPVIDANHFEFKPIMFQILQTIGQFSGLPNEDPHKHMKQFLRICNSFKLNGASNETLRLKLFPFPLQGNAEAEGNKSP

W9RHB3 Putative disease resistance RPP13-like protein 16.4e-1944.44Show/hide
Query:  GDPLGAQQRGARP------NNVQQDYAAATFYNLNTGIVEPVIDANHFEFKPIMFQILQTIGQFSGLPNEDPHKHMKQFLRICNSFKLNGASNETLRLKL
        G  L A +   RP      +   +D+A      LN  IV P I+A HFE KP+MFQ+LQ +GQFSG+  +DPH+H++ F+ + + FKL G  +ETLRL L
Subjt:  GDPLGAQQRGARP------NNVQQDYAAATFYNLNTGIVEPVIDANHFEFKPIMFQILQTIGQFSGLPNEDPHKHMKQFLRICNSFKLNGASNETLRLKL

Query:  FPFPLQGNAEAEGNKSP
        FPF L+  A A  N  P
Subjt:  FPFPLQGNAEAEGNKSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCCCGATATGCGGTCGCAACTGGGCTTTCCGACAGAATATCAAGACTTGCGGGATCTTCACAGAATCATCCGAAAATCTCCAATCTGGTACCAAATCTCCAAAGAT
TGTGGATTCTTACCTTCGAAGGCCTTCTCACATTGATCTCGACAACCAACCTCACCTTCCAAGCCTTTGTCGGCTTTTCCATTCGAAAGAAGAAGAAGAGAAAGGCGCAA
CTGAGAGAGGCTATCTGCACCATGTCTATGTGGACAACATAGATAGTGTTTCTCAGCTAACTGCAATGCTTGAGTGTTGCGCTAAGCAGCACGCACGTCAAGTTTTTGGC
GTCGTTGTCGGGGAGATTTTAGTAAAACGGTTGATTAGCACAAATTTTAGTTTCTGTAAATCAGGAATTGCGATTGGTTTGCGACCGCAAATTCCTCTGTCACAAGACAT
CAATTCTTTTCGCAGGGATTTATTTGCTGATTGGATTGGTGAAATTGCTATGGAGCCACCTGTTGGAGACCCTCTCGGTGCGCAGCAAAGAGGAGCACGACCTAACAATG
TGCAGCAGGATTATGCGGCTGCAACTTTTTATAATCTCAATACAGGAATTGTTGAGCCAGTCATTGATGCCAATCACTTTGAGTTTAAGCCAATCATGTTCCAAATACTT
CAGACGATAGGACAATTTTCAGGACTTCCTAATGAAGATCCTCACAAACACATGAAGCAATTCTTGAGAATATGCAACTCATTCAAGCTCAATGGAGCATCAAATGAAAC
TTTGCGTTTGAAACTTTTTCCATTTCCATTACAGGGTAATGCAGAAGCTGAAGGGAATAAAAGTCCCCACGCAGCGGAAGCGCATCGATTGGACCTTACGCCGTGTATTA
ATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGCCCGATATGCGGTCGCAACTGGGCTTTCCGACAGAATATCAAGACTTGCGGGATCTTCACAGAATCATCCGAAAATCTCCAATCTGGTACCAAATCTCCAAAGAT
TGTGGATTCTTACCTTCGAAGGCCTTCTCACATTGATCTCGACAACCAACCTCACCTTCCAAGCCTTTGTCGGCTTTTCCATTCGAAAGAAGAAGAAGAGAAAGGCGCAA
CTGAGAGAGGCTATCTGCACCATGTCTATGTGGACAACATAGATAGTGTTTCTCAGCTAACTGCAATGCTTGAGTGTTGCGCTAAGCAGCACGCACGTCAAGTTTTTGGC
GTCGTTGTCGGGGAGATTTTAGTAAAACGGTTGATTAGCACAAATTTTAGTTTCTGTAAATCAGGAATTGCGATTGGTTTGCGACCGCAAATTCCTCTGTCACAAGACAT
CAATTCTTTTCGCAGGGATTTATTTGCTGATTGGATTGGTGAAATTGCTATGGAGCCACCTGTTGGAGACCCTCTCGGTGCGCAGCAAAGAGGAGCACGACCTAACAATG
TGCAGCAGGATTATGCGGCTGCAACTTTTTATAATCTCAATACAGGAATTGTTGAGCCAGTCATTGATGCCAATCACTTTGAGTTTAAGCCAATCATGTTCCAAATACTT
CAGACGATAGGACAATTTTCAGGACTTCCTAATGAAGATCCTCACAAACACATGAAGCAATTCTTGAGAATATGCAACTCATTCAAGCTCAATGGAGCATCAAATGAAAC
TTTGCGTTTGAAACTTTTTCCATTTCCATTACAGGGTAATGCAGAAGCTGAAGGGAATAAAAGTCCCCACGCAGCGGAAGCGCATCGATTGGACCTTACGCCGTGTATTA
ATTAA
Protein sequenceShow/hide protein sequence
MRPICGRNWAFRQNIKTCGIFTESSENLQSGTKSPKIVDSYLRRPSHIDLDNQPHLPSLCRLFHSKEEEEKGATERGYLHHVYVDNIDSVSQLTAMLECCAKQHARQVFG
VVVGEILVKRLISTNFSFCKSGIAIGLRPQIPLSQDINSFRRDLFADWIGEIAMEPPVGDPLGAQQRGARPNNVQQDYAAATFYNLNTGIVEPVIDANHFEFKPIMFQIL
QTIGQFSGLPNEDPHKHMKQFLRICNSFKLNGASNETLRLKLFPFPLQGNAEAEGNKSPHAAEAHRLDLTPCIN