; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg008199 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008199
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTATA-box-binding protein
Genome locationscaffold2:18939499..18948742
RNA-Seq ExpressionSpg008199
SyntenySpg008199
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
P26357 TATA-box-binding protein5.1e-0588Show/hide
Query:  MADQGLDGAQPVDLKKHPSGIVPTL
        MADQGL+G+QPVDL KHPSGIVPTL
Subjt:  MADQGLDGAQPVDLKKHPSGIVPTL
P28147 TATA-box-binding protein 14.3e-0480Show/hide
Query:  MADQGLDGAQPVDLKKHPSGIVPTL
        M DQGL+G+ PVDL KHPSGIVPTL
Subjt:  MADQGLDGAQPVDLKKHPSGIVPTL
P28148 TATA-box-binding protein 21.9e-0484Show/hide
Query:  MADQGLDGAQPVDLKKHPSGIVPTL
        MADQG +G+QPVDL KHPSGIVPTL
Subjt:  MADQGLDGAQPVDLKKHPSGIVPTL
P50159 TATA-box-binding protein 25.6e-0480Show/hide
Query:  MADQGLDGAQPVDLKKHPSGIVPTL
        MA+ GL+G+QPVDL KHPSGIVPTL
Subjt:  MADQGLDGAQPVDLKKHPSGIVPTL
Q42808 TATA-box-binding protein3.0e-0588Show/hide
Query:  MADQGLDGAQPVDLKKHPSGIVPTL
        MADQGL+G+QPVDL+KHPSGIVPTL
Subjt:  MADQGLDGAQPVDLKKHPSGIVPTL
Arabidopsis top hitse value%identityAlignment
AT1G55520.1 TATA binding protein 21.4e-0584Show/hide
Query:  MADQGLDGAQPVDLKKHPSGIVPTL
        MADQG +G+QPVDL KHPSGIVPTL
Subjt:  MADQGLDGAQPVDLKKHPSGIVPTL
AT1G55520.2 TATA binding protein 21.4e-0584Show/hide
Query:  MADQGLDGAQPVDLKKHPSGIVPTL
        MADQG +G+QPVDL KHPSGIVPTL
Subjt:  MADQGLDGAQPVDLKKHPSGIVPTL
AT3G13440.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein5.2e-0571.43Show/hide
Query:  MADQGLDGAQPVDLKKHPSGIVPTLHRQ
        MADQGL+ + P+DL KHPSGIVPT H Q
Subjt:  MADQGLDGAQPVDLKKHPSGIVPTLHRQ
AT3G13445.1 TATA binding protein 13.1e-0580Show/hide
Query:  MADQGLDGAQPVDLKKHPSGIVPTL
        M DQGL+G+ PVDL KHPSGIVPTL
Subjt:  MADQGLDGAQPVDLKKHPSGIVPTL
AT3G13445.2 TATA binding protein 13.1e-0580Show/hide
Query:  MADQGLDGAQPVDLKKHPSGIVPTL
        M DQGL+G+ PVDL KHPSGIVPTL
Subjt:  MADQGLDGAQPVDLKKHPSGIVPTL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATGGTGGACGGACAACTTCTTCAACTGGAACTTCCGGCGGCTTCTGGAGCCAGTGACGGCGCCGACGAAAATGGCTGAGCAGGTCGGTGACAAGTGTGAGTGCGA
TGAAGGAGGGAAGGAAAATCGAATCACCATCGCAAGGAGGCGTTCACGCCGCTGGGACCCAGATGAGCACCGAATCTGCCCGTTCGCTGCGGGTGTAGCGTTGCTAGCTT
TCCGGTGCGAGATTGGAGTCGTTCGTGGAGGAAGACGCTGGCGATTGTGTAGGTGGGCCTCGTTCCGACTCGCCTGGGCGTGGGTGCTCGGAATCACGCTCAGAGAAGAG
AATGGAAGGGATAAAAATCGGGAAGGTTGTTGCGTGCGAGGAAGAGGACGACGGCTGGGGTTCTTGCAGCACGAAGAGGAGGAAGAGACAGACAGCTGGCGGCGTGGGGG
TGTTGCCGCCGGAGAAGAAAACTCGTGGGGTTCGGCGGCTATGCGTGAAGGGGAGAAGAAGAGATTTTCATCTTTTGGACGCAAGTTAGGAGGCAGTGGCAGTGCTCTCC
CTCCCTCTTCTTCGCATTTTAATCGCGCATCGGCCCCTCGCGAGTTTGCTCCCTCTCTCTCGTTTTCTTTGGCCGAGACCCGCAAGCCCTCTTCTCCCTCTCGCCGTTTC
TCTCCGCCTCGAGCAACGGCGTCGGCGTCATCTCTCCTCCTCCGTTCGGCCAAGACCCGCACGCTCAGCCACCCACGCGATTCAGGCCAGTCGATTTCCTCTCTCTTTCT
TTCGTTCTTCCTTCTCCGGCTTCACCTACACGCTCGCGAACAGCGCCCACGAATCCGACGCAGAATCTTTCTATCCCTCACGTTTCAACGCACGTGTAGCAGCGGCTACC
CGTGTTTGGCGTGGTTCCACCCTCCTTCGACGTTGATTCAGCAATCCGGTAAGTTTAGTCATAAGGTTGTTGAACTTAGAACTCAAGGATACAGATGTACAACCTATAGA
ACAGATCCTGTTCAAGTAAGTTTTGACGAGTTGTGGAATATGGTTGTGTTATTGCTATATTGTTGTGGTCATCTGAATTGTTGTGCATATCTGGGAATGGCAGATCAAGG
CTTGGATGGAGCCCAACCTGTCGATCTTAAAAAGCACCCTTCTGGGATTGTACCTACCCTTCACCGACAACCGCGACTTCTGGAGCTGACGGCGACGACGAAGACGGTGG
CGACAAGTGTGATGAGGGAGATCAGTGACGACTGGTGCGATGAAGGAGATCGACCGAGACAAGGTATGTCTTCGGGGAAGGGGCAGAGGGATGCTTCTCCAATTTCGGTC
TCACCATCTCCTCTGTTGTGTAACTCGATCCTGGGTCAAGGAAGTGTCGTGCCTCACCCAGTTTTTTACTCTTTGGGAGAGAGTGTTCCAAATTTACCCACATTGTCTAG
TATTGACGGGGGAGCCTTGAGGGGGGATGCCATTTCTTTCCTAATGGGGGGCGGTTGGGAACTTAGGCAACTTGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATGGTGGACGGACAACTTCTTCAACTGGAACTTCCGGCGGCTTCTGGAGCCAGTGACGGCGCCGACGAAAATGGCTGAGCAGGTCGGTGACAAGTGTGAGTGCGA
TGAAGGAGGGAAGGAAAATCGAATCACCATCGCAAGGAGGCGTTCACGCCGCTGGGACCCAGATGAGCACCGAATCTGCCCGTTCGCTGCGGGTGTAGCGTTGCTAGCTT
TCCGGTGCGAGATTGGAGTCGTTCGTGGAGGAAGACGCTGGCGATTGTGTAGGTGGGCCTCGTTCCGACTCGCCTGGGCGTGGGTGCTCGGAATCACGCTCAGAGAAGAG
AATGGAAGGGATAAAAATCGGGAAGGTTGTTGCGTGCGAGGAAGAGGACGACGGCTGGGGTTCTTGCAGCACGAAGAGGAGGAAGAGACAGACAGCTGGCGGCGTGGGGG
TGTTGCCGCCGGAGAAGAAAACTCGTGGGGTTCGGCGGCTATGCGTGAAGGGGAGAAGAAGAGATTTTCATCTTTTGGACGCAAGTTAGGAGGCAGTGGCAGTGCTCTCC
CTCCCTCTTCTTCGCATTTTAATCGCGCATCGGCCCCTCGCGAGTTTGCTCCCTCTCTCTCGTTTTCTTTGGCCGAGACCCGCAAGCCCTCTTCTCCCTCTCGCCGTTTC
TCTCCGCCTCGAGCAACGGCGTCGGCGTCATCTCTCCTCCTCCGTTCGGCCAAGACCCGCACGCTCAGCCACCCACGCGATTCAGGCCAGTCGATTTCCTCTCTCTTTCT
TTCGTTCTTCCTTCTCCGGCTTCACCTACACGCTCGCGAACAGCGCCCACGAATCCGACGCAGAATCTTTCTATCCCTCACGTTTCAACGCACGTGTAGCAGCGGCTACC
CGTGTTTGGCGTGGTTCCACCCTCCTTCGACGTTGATTCAGCAATCCGGTAAGTTTAGTCATAAGGTTGTTGAACTTAGAACTCAAGGATACAGATGTACAACCTATAGA
ACAGATCCTGTTCAAGTAAGTTTTGACGAGTTGTGGAATATGGTTGTGTTATTGCTATATTGTTGTGGTCATCTGAATTGTTGTGCATATCTGGGAATGGCAGATCAAGG
CTTGGATGGAGCCCAACCTGTCGATCTTAAAAAGCACCCTTCTGGGATTGTACCTACCCTTCACCGACAACCGCGACTTCTGGAGCTGACGGCGACGACGAAGACGGTGG
CGACAAGTGTGATGAGGGAGATCAGTGACGACTGGTGCGATGAAGGAGATCGACCGAGACAAGGTATGTCTTCGGGGAAGGGGCAGAGGGATGCTTCTCCAATTTCGGTC
TCACCATCTCCTCTGTTGTGTAACTCGATCCTGGGTCAAGGAAGTGTCGTGCCTCACCCAGTTTTTTACTCTTTGGGAGAGAGTGTTCCAAATTTACCCACATTGTCTAG
TATTGACGGGGGAGCCTTGAGGGGGGATGCCATTTCTTTCCTAATGGGGGGCGGTTGGGAACTTAGGCAACTTGTCTAG
Protein sequenceShow/hide protein sequence
MEWWTDNFFNWNFRRLLEPVTAPTKMAEQVGDKCECDEGGKENRITIARRRSRRWDPDEHRICPFAAGVALLAFRCEIGVVRGGRRWRLCRWASFRLAWAWVLGITLREE
NGRDKNREGCCVRGRGRRLGFLQHEEEEETDSWRRGGVAAGEENSWGSAAMREGEKKRFSSFGRKLGGSGSALPPSSSHFNRASAPREFAPSLSFSLAETRKPSSPSRRF
SPPRATASASSLLLRSAKTRTLSHPRDSGQSISSLFLSFFLLRLHLHAREQRPRIRRRIFLSLTFQRTCSSGYPCLAWFHPPSTLIQQSGKFSHKVVELRTQGYRCTTYR
TDPVQVSFDELWNMVVLLLYCCGHLNCCAYLGMADQGLDGAQPVDLKKHPSGIVPTLHRQPRLLELTATTKTVATSVMREISDDWCDEGDRPRQGMSSGKGQRDASPISV
SPSPLLCNSILGQGSVVPHPVFYSLGESVPNLPTLSSIDGGALRGDAISFLMGGGWELRQLV