; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg008222 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008222
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein ALP1-like
Genome locationscaffold2:18213193..18215132
RNA-Seq ExpressionSpg008222
SyntenySpg008222
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV81011.1 DDE_4 domain-containing protein [Cephalotus follicularis]8.0e-0557.41Show/hide
Query:  LLPK-LRWEMPIDPMEDEL--VYNTLNETELDPITYVETSNEWNAWRDTLAREM
        LLP  +R EMP+DPMED L  + +  NE   DPIT +ETS+EW+AWRD LA  M
Subjt:  LLPK-LRWEMPIDPMEDEL--VYNTLNETELDPITYVETSNEWNAWRDTLAREM
XP_022155183.1 protein ALP1-like [Momordica charantia]2.0e-1181.82Show/hide
Query:  EMPIDPMEDELVYNTLNETELDPITYVETSNEWNAWRDTLAREM
        EMPIDP+EDELV+NT +ETELD ITYVETSNEWNAW+D LAR+M
Subjt:  EMPIDPMEDELVYNTLNETELDPITYVETSNEWNAWRDTLAREM
TrEMBL top hitse value%identityAlignment
A0A1Q3CLP4 DDE_4 domain-containing protein3.9e-0557.41Show/hide
Query:  LLPK-LRWEMPIDPMEDEL--VYNTLNETELDPITYVETSNEWNAWRDTLAREM
        LLP  +R EMP+DPMED L  + +  NE   DPIT +ETS+EW+AWRD LA  M
Subjt:  LLPK-LRWEMPIDPMEDEL--VYNTLNETELDPITYVETSNEWNAWRDTLAREM
A0A6J1DMA5 protein ALP1-like9.5e-1281.82Show/hide
Query:  EMPIDPMEDELVYNTLNETELDPITYVETSNEWNAWRDTLAREM
        EMPIDP+EDELV+NT +ETELD ITYVETSNEWNAW+D LAR+M
Subjt:  EMPIDPMEDELVYNTLNETELDPITYVETSNEWNAWRDTLAREM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAATTCCAGCCAAATTTGGAAAATTACAATTTTGGAAAACTGCCTAGCGTCGAGACGCTAGGACACAGCGTCGCGACGCTAGGCCTTCAACAGCGTCTCGACGC
CTGGGTTGAAGGGTCTCGACACTGTGACGCCTCCAAGGGCAGAATGGTCATTTTACGTCTCGGTTTTGCTCGTTTAAGCCCCGAATTGCTTCCAAAGCTCCGATGGGAAA
TGCCTATTGATCCAATGGAAGATGAGTTGGTTTATAACACATTGAATGAAACTGAGTTAGACCCTATCACTTATGTGGAGACATCGAATGAGTGGAATGCTTGGCGGGAT
ACCTTAGCACGAGAGATGAATCATTTATTGGAGGCGGCAAAAGAGCACAGCGTCGAGAGCACAGCGTCTCGACGCTGTGCTATAGCATCTCGACGCTCTCGGTTTTTCCT
TAAACAGAATGCGCGGTATTGGGACAACATCTCGACGCTGTCGACAGAATCTTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAATTCCAGCCAAATTTGGAAAATTACAATTTTGGAAAACTGCCTAGCGTCGAGACGCTAGGACACAGCGTCGCGACGCTAGGCCTTCAACAGCGTCTCGACGC
CTGGGTTGAAGGGTCTCGACACTGTGACGCCTCCAAGGGCAGAATGGTCATTTTACGTCTCGGTTTTGCTCGTTTAAGCCCCGAATTGCTTCCAAAGCTCCGATGGGAAA
TGCCTATTGATCCAATGGAAGATGAGTTGGTTTATAACACATTGAATGAAACTGAGTTAGACCCTATCACTTATGTGGAGACATCGAATGAGTGGAATGCTTGGCGGGAT
ACCTTAGCACGAGAGATGAATCATTTATTGGAGGCGGCAAAAGAGCACAGCGTCGAGAGCACAGCGTCTCGACGCTGTGCTATAGCATCTCGACGCTCTCGGTTTTTCCT
TAAACAGAATGCGCGGTATTGGGACAACATCTCGACGCTGTCGACAGAATCTTTATAA
Protein sequenceShow/hide protein sequence
MEKFQPNLENYNFGKLPSVETLGHSVATLGLQQRLDAWVEGSRHCDASKGRMVILRLGFARLSPELLPKLRWEMPIDPMEDELVYNTLNETELDPITYVETSNEWNAWRD
TLAREMNHLLEAAKEHSVESTASRRCAIASRRSRFFLKQNARYWDNISTLSTESL