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Spg008224 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008224
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold2:18495513..18495881
RNA-Seq ExpressionSpg008224
SyntenySpg008224
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607014.1 Protein PTST, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.1e-0649.41Show/hide
Query:  AAMAAAMAVVVILTVSGSNCRAASLSRPISHFSNETEA---SMWCDGRAKECLAGEADV----FSSMAAGSQEPVTPGTGNPNIP
        AAM AA+A +V+LT++ SN  AASLSR  S+F NET+A   S WCD R +ECL G+ DV    F S+A      ++  TGN N P
Subjt:  AAMAAAMAVVVILTVSGSNCRAASLSRPISHFSNETEA---SMWCDGRAKECLAGEADV----FSSMAAGSQEPVTPGTGNPNIP

KAG6607070.1 hypothetical protein SDJN03_00412, partial [Cucurbita argyrosperma subsp. sororia]2.4e-0638.28Show/hide
Query:  MAHPPNTGAAMAAAMAV---VVILTVSGSNCRAASLSRPISHFSNET---EASMWCDGRAKECLAGEAD---VFSSMAAGSQEPVTPGTGNPNIPTCGRL
        M H  N+GA MAAA A    V IL +SGS+C  AS +   S + N T    ASMWCDGR +EC+  E D    F S+ A + + ++  T N N P C R 
Subjt:  MAHPPNTGAAMAAAMAV---VVILTVSGSNCRAASLSRPISHFSNET---EASMWCDGRAKECLAGEAD---VFSSMAAGSQEPVTPGTGNPNIPTCGRL

Query:  QSTDPYKNCLGSGNPKPKKGEHCDLFNR
             YK+C  +      K ++C  + R
Subjt:  QSTDPYKNCLGSGNPKPKKGEHCDLFNR

KAG6607071.1 hypothetical protein SDJN03_00413, partial [Cucurbita argyrosperma subsp. sororia]1.5e-0837.8Show/hide
Query:  MAHPPNTGAAMAAAMAVVVILTVSGSNCRAASLSRPISHFSN--ETEASMWCDGRAKECLAGEAD---VFSSMAAGSQEPVTPGTGNPNIPTCGRLQSTD
        M H  N+G  MAAA   V IL +SGS+C  AS   P S+ +N     ASMWCDGR +EC+  E D    F S+   +++ ++P + N N   C R    D
Subjt:  MAHPPNTGAAMAAAMAVVVILTVSGSNCRAASLSRPISHFSN--ETEASMWCDGRAKECLAGEAD---VFSSMAAGSQEPVTPGTGNPNIPTCGRLQSTD

Query:  PYKNCLG--SGNPKPKKGEHCDLFNRV
         Y++C      NP P    +C  + RV
Subjt:  PYKNCLG--SGNPKPKKGEHCDLFNRV

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACATCCTCCAAACACCGGAGCTGCAATGGCAGCAGCAATGGCGGTGGTCGTGATTTTGACAGTGAGCGGAAGCAATTGCAGGGCTGCTTCTCTAAGTCGTCCCAT
TTCCCATTTCAGCAACGAGACCGAGGCGTCGATGTGGTGCGATGGCCGTGCCAAAGAATGCCTCGCCGGAGAAGCCGACGTTTTCTCAAGCATGGCAGCTGGTTCTCAGG
AACCGGTGACTCCGGGCACCGGAAACCCGAATATACCTACATGTGGACGCCTGCAAAGTACAGATCCATATAAGAACTGTCTAGGTTCAGGAAACCCTAAGCCGAAAAAG
GGAGAACATTGTGATCTATTTAATCGCGTCGGATGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCACATCCTCCAAACACCGGAGCTGCAATGGCAGCAGCAATGGCGGTGGTCGTGATTTTGACAGTGAGCGGAAGCAATTGCAGGGCTGCTTCTCTAAGTCGTCCCAT
TTCCCATTTCAGCAACGAGACCGAGGCGTCGATGTGGTGCGATGGCCGTGCCAAAGAATGCCTCGCCGGAGAAGCCGACGTTTTCTCAAGCATGGCAGCTGGTTCTCAGG
AACCGGTGACTCCGGGCACCGGAAACCCGAATATACCTACATGTGGACGCCTGCAAAGTACAGATCCATATAAGAACTGTCTAGGTTCAGGAAACCCTAAGCCGAAAAAG
GGAGAACATTGTGATCTATTTAATCGCGTCGGATGTTAG
Protein sequenceShow/hide protein sequence
MAHPPNTGAAMAAAMAVVVILTVSGSNCRAASLSRPISHFSNETEASMWCDGRAKECLAGEADVFSSMAAGSQEPVTPGTGNPNIPTCGRLQSTDPYKNCLGSGNPKPKK
GEHCDLFNRVGC