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Spg008236 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008236
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein LUTEIN DEFICIENT 5
Genome locationscaffold2:19125423..19126488
RNA-Seq ExpressionSpg008236
SyntenySpg008236
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3452430.1 hypothetical protein FNV43_RR02863 [Rhamnella rubrinervis]1.7e-1145.19Show/hide
Query:  NQGPSSATFYSSGLSTIQFPQTRMNVQDGLASSSNLHLSRNWISEGHGLS----NTTSPPTSRGMGQSRNAVYDPTYESMGLPVDPHLRMFLARRDSTGN
        N G  ++  Y  G S+ +  + +M+ +D +  SSNL L+ +WI +G G      +T S P SR +   +NAVYDP YE+MGLPVDPHLRMF+ARRD+  N
Subjt:  NQGPSSATFYSSGLSTIQFPQTRMNVQDGLASSSNLHLSRNWISEGHGLS----NTTSPPTSRGMGQSRNAVYDPTYESMGLPVDPHLRMFLARRDSTGN

Query:  LYFH
        +  H
Subjt:  LYFH

KAG6590081.1 hypothetical protein SDJN03_15504, partial [Cucurbita argyrosperma subsp. sororia]2.8e-4183.65Show/hide
Query:  SEEIQFQGVMNQGPSSATFYSSGLSTIQFPQTRMNVQDGLASSSNLHLSRNWISEGHGLSNTTSPPTSRGMGQSRNAVYDPTYESMGLPVDPHLRMFLAR
        SEEIQFQG++NQGPS+ TFYS+GLSTIQFPQTR+N+QDGL S SNLHLSRNWISEG+GLSN T+PPTSR   Q+RNAVYDPTYESMGLPVDPHLRMFLAR
Subjt:  SEEIQFQGVMNQGPSSATFYSSGLSTIQFPQTRMNVQDGLASSSNLHLSRNWISEGHGLSNTTSPPTSRGMGQSRNAVYDPTYESMGLPVDPHLRMFLAR

Query:  RDST
        RD T
Subjt:  RDST

KAG7023746.1 hypothetical protein SDJN02_14772, partial [Cucurbita argyrosperma subsp. argyrosperma]4.7e-4175.21Show/hide
Query:  SEEIQFQGVMNQGPSSATFYSSGLSTIQFPQTRMNVQDGLASSSNLHLSRNWISEGHGLSNTTSPPTS----------RGMGQSRNAVYDPTYESMGLPV
        SEEIQFQG++NQGPS+ TFYS+GLSTIQFPQTR+N+QDGL S SNLHLSRNWISEG+GLSN T+PPTS              Q+RNAVYDPTYESMGLPV
Subjt:  SEEIQFQGVMNQGPSSATFYSSGLSTIQFPQTRMNVQDGLASSSNLHLSRNWISEGHGLSNTTSPPTS----------RGMGQSRNAVYDPTYESMGLPV

Query:  DPHLRMFLARRDSTGNL
        DPHLRMFLARRD TGN+
Subjt:  DPHLRMFLARRDSTGNL

XP_008443727.1 PREDICTED: uncharacterized protein LOC103487245 isoform X1 [Cucumis melo]8.6e-3573.33Show/hide
Query:  SEEIQFQGVMNQGPSSATFYSSGLSTIQFPQTRMNVQDGLASSSNLHLSRNWISEGHGLSNTTSPPTSRGMGQSRNAVYDPTYESMGLPVDPHLRMFLAR
        +EEIQF G++NQG S+  FY SGLS  QFPQ R+N+QD L SSSNLHL RNWISE + LSN T+PPTSR   +SRNAVYDPTYESMGLP+DPHLRMFLAR
Subjt:  SEEIQFQGVMNQGPSSATFYSSGLSTIQFPQTRMNVQDGLASSSNLHLSRNWISEGHGLSNTTSPPTSRGMGQSRNAVYDPTYESMGLPVDPHLRMFLAR

Query:  RDSTG
        RD TG
Subjt:  RDSTG

XP_008443728.1 PREDICTED: uncharacterized protein LOC103487245 isoform X2 [Cucumis melo]6.6e-3572.64Show/hide
Query:  SEEIQFQGVMNQGPSSATFYSSGLSTIQFPQTRMNVQDGLASSSNLHLSRNWISEGHGLSNTTSPPTSRGMGQSRNAVYDPTYESMGLPVDPHLRMFLAR
        +EEIQF G++NQG S+  FY SGLS  QFPQ R+N+QD L SSSNLHL RNWISE + LSN T+PPTSR   +SRNAVYDPTYESMGLP+DPHLRMFLAR
Subjt:  SEEIQFQGVMNQGPSSATFYSSGLSTIQFPQTRMNVQDGLASSSNLHLSRNWISEGHGLSNTTSPPTSRGMGQSRNAVYDPTYESMGLPVDPHLRMFLAR

Query:  RDSTGN
        RD TG+
Subjt:  RDSTGN

TrEMBL top hitse value%identityAlignment
A0A1S3B887 uncharacterized protein LOC103487245 isoform X14.2e-3573.33Show/hide
Query:  SEEIQFQGVMNQGPSSATFYSSGLSTIQFPQTRMNVQDGLASSSNLHLSRNWISEGHGLSNTTSPPTSRGMGQSRNAVYDPTYESMGLPVDPHLRMFLAR
        +EEIQF G++NQG S+  FY SGLS  QFPQ R+N+QD L SSSNLHL RNWISE + LSN T+PPTSR   +SRNAVYDPTYESMGLP+DPHLRMFLAR
Subjt:  SEEIQFQGVMNQGPSSATFYSSGLSTIQFPQTRMNVQDGLASSSNLHLSRNWISEGHGLSNTTSPPTSRGMGQSRNAVYDPTYESMGLPVDPHLRMFLAR

Query:  RDSTG
        RD TG
Subjt:  RDSTG

A0A1S3B8P4 uncharacterized protein LOC103487245 isoform X23.2e-3572.64Show/hide
Query:  SEEIQFQGVMNQGPSSATFYSSGLSTIQFPQTRMNVQDGLASSSNLHLSRNWISEGHGLSNTTSPPTSRGMGQSRNAVYDPTYESMGLPVDPHLRMFLAR
        +EEIQF G++NQG S+  FY SGLS  QFPQ R+N+QD L SSSNLHL RNWISE + LSN T+PPTSR   +SRNAVYDPTYESMGLP+DPHLRMFLAR
Subjt:  SEEIQFQGVMNQGPSSATFYSSGLSTIQFPQTRMNVQDGLASSSNLHLSRNWISEGHGLSNTTSPPTSRGMGQSRNAVYDPTYESMGLPVDPHLRMFLAR

Query:  RDSTGN
        RD TG+
Subjt:  RDSTGN

A0A2P5B9L5 Uncharacterized protein3.3e-0843.96Show/hide
Query:  YSSGLSTIQFPQTRMNVQD--GLASSSNLHLSRNWISEGHGLSNTTSPPTSRGMGQSRNAVYDPTYESMGLPVDPHLRMFLARRDSTGNLY
        +  G S+++ P+ RM  QD   +  S NL L+ +W+S+G    N+  P  ++  G  RN VYDP YE MGLPVDPHLR+F+  RD+ GN +
Subjt:  YSSGLSTIQFPQTRMNVQD--GLASSSNLHLSRNWISEGHGLSNTTSPPTSRGMGQSRNAVYDPTYESMGLPVDPHLRMFLARRDSTGNLY

A0A540KET3 Uncharacterized protein1.1e-0634.88Show/hide
Query:  SEEIQFQGVM---NQGPSSATFYSSGLSTIQFPQ------TRMNVQDGLASS----------SNLHLSRNWISEGHGLSNTTSPPTSRGMGQSRNAVYDP
        S EIQF G+M   +   S+ +  S+G   I   Q      T +N  D LA            +N H S N+    +  S    PP +      +N++YDP
Subjt:  SEEIQFQGVM---NQGPSSATFYSSGLSTIQFPQ------TRMNVQDGLASS----------SNLHLSRNWISEGHGLSNTTSPPTSRGMGQSRNAVYDP

Query:  TYESMGLPVDPHLRMFLARRDSTGNLYFH
         YE+MGLP+DPHLRMFLA++      Y H
Subjt:  TYESMGLPVDPHLRMFLARRDSTGNLYFH

A0A6P6FXF1 uncharacterized protein LOC1124906711.3e-0948.35Show/hide
Query:  YSSGLSTIQFPQTRMNVQDGLASSSNLHLSRNWISEGHGLS----NTTSPPTSRGMGQSRNAVYDPTYESMGLPVDPHLRMFLARRDSTGN
        Y  G S+ +  + ++  QD +  S NL L+ +WIS+G G      +T++   SR M   RN VYDP YE+MGLPVDPHLRMF+ RRD TGN
Subjt:  YSSGLSTIQFPQTRMNVQDGLASSSNLHLSRNWISEGHGLS----NTTSPPTSRGMGQSRNAVYDPTYESMGLPVDPHLRMFLARRDSTGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCGGAAGAAATACAATTTCAAGGAGTGATGAACCAGGGTCCATCATCAGCCACCTTTTACTCAAGTGGTCTTTCCACCATCCAATTTCCTCAGACAAGAATGAATGTGCA
AGATGGATTGGCATCATCTTCCAACCTTCACCTCTCAAGGAATTGGATTTCTGAAGGGCATGGCTTAAGCAATACTACCTCCCCTCCAACTTCAAGAGGCATGGGGCAGA
GTAGAAATGCAGTGTATGACCCAACATATGAGTCGATGGGATTACCAGTAGATCCTCATTTACGTATGTTTCTGGCAAGGCGTGATTCAACTGGTAATCTTTATTTCCAT
ATTCTCTAA
mRNA sequenceShow/hide mRNA sequence
TCGGAAGAAATACAATTTCAAGGAGTGATGAACCAGGGTCCATCATCAGCCACCTTTTACTCAAGTGGTCTTTCCACCATCCAATTTCCTCAGACAAGAATGAATGTGCA
AGATGGATTGGCATCATCTTCCAACCTTCACCTCTCAAGGAATTGGATTTCTGAAGGGCATGGCTTAAGCAATACTACCTCCCCTCCAACTTCAAGAGGCATGGGGCAGA
GTAGAAATGCAGTGTATGACCCAACATATGAGTCGATGGGATTACCAGTAGATCCTCATTTACGTATGTTTCTGGCAAGGCGTGATTCAACTGGTAATCTTTATTTCCAT
ATTCTCTAA
Protein sequenceShow/hide protein sequence
SEEIQFQGVMNQGPSSATFYSSGLSTIQFPQTRMNVQDGLASSSNLHLSRNWISEGHGLSNTTSPPTSRGMGQSRNAVYDPTYESMGLPVDPHLRMFLARRDSTGNLYFH
IL