; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg008247 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008247
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold5:27522798..27526533
RNA-Seq ExpressionSpg008247
SyntenySpg008247
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4382082.1 hypothetical protein F8388_001227 [Cannabis sativa]2.2e-1326.89Show/hide
Query:  LEVQASNEASISHNGKMEALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCKTKLETITHLLWGVQSNKEYFKH---------QMR
        L  +  N A  S N    A W + W + + PK+++  W +FH  +P +T L KRGM +N  C  CK+++E + H LW +    + +KH          ++
Subjt:  LEVQASNEASISHNGKMEALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCKTKLETITHLLWGVQSNKEYFKH---------QMR

Query:  RAIEY---FTGDVKTD----------GQADWSEISNRPVDMDQATPEHREP-----APTATNDRQ-ATIASVRWMPPAMGLWKLNNDASWNEEKKLGGVG
        +A ++     G +  +           Q +     N+ ++ D   P   E      A   TN  Q  +  +V+W PP  G + +N DAS  E +   G+G
Subjt:  RAIEY---FTGDVKTD----------GQADWSEISNRPVDMDQATPEHREP-----APTATNDRQ-ATIASVRWMPPAMGLWKLNNDASWNEEKKLGGVG

Query:  WVLRDEKGNLIS
         ++RD  G L++
Subjt:  WVLRDEKGNLIS

XP_024038343.1 uncharacterized protein LOC112097373 [Citrus clementina]8.2e-1330.05Show/hide
Query:  EALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCKTKLETITHLLWGVQSNKEYFKHQMRRAIEYFTGDVKTDGQAD---------
        E  W+  W   +P KIR+  W    ++LP+  NL KR +   PLC  C  KLETI H L G +  ++ +K      I  F  D+K   + D         
Subjt:  EALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCKTKLETITHLLWGVQSNKEYFKHQMRRAIEYFTGDVKTDGQAD---------

Query:  ------------------------W-----SEISNRPVDMDQATPE--HREPAPTATN-DRQATIASVRWMPPAMGLWKLNNDASWNEEKKLGGVGWVLR
                                W     ++I +  V   +A  E   R   P AT+ D Q++     W PP  G +K+N DA+ N EK++ G+G V+R
Subjt:  ------------------------W-----SEISNRPVDMDQATPE--HREPAPTATN-DRQATIASVRWMPPAMGLWKLNNDASWNEEKKLGGVGWVLR

Query:  DEKGNLISTGFRV
        DE GN+I+   +V
Subjt:  DEKGNLISTGFRV

XP_024038343.1 uncharacterized protein LOC112097373 [Citrus clementina]1.4e-0449.09Show/hide
Query:  KWFHMKANSRKKVNKICGLYDASGGWVETDEDMERVANNYFQALFQSSSPHLDAI
        K+FH KA+SRKK N+I G+ +A+G W+E  E +E   N YF  LF +S P+ D I
Subjt:  KWFHMKANSRKKVNKICGLYDASGGWVETDEDMERVANNYFQALFQSSSPHLDAI

XP_024041921.1 uncharacterized protein LOC112099052 [Citrus clementina]3.9e-1531.61Show/hide
Query:  ASISHNGKMEALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCKTKLETITHLLWGVQSNKEYFKHQMRRAIEYFTGDVKTD----
        A+ S +    + W   W   +P KIR+  W    +ILP+  NL KR +   PLC L K  +ETI H L G ++ K+ +K    R  E   G    D    
Subjt:  ASISHNGKMEALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCKTKLETITHLLWGVQSNKEYFKHQMRRAIEYFTGDVKTD----

Query:  --------GQADWSEISNRPVDMDQATPEHREPAPTATNDRQATIASVRWMPPAMGLWKLNNDASWNEEKKLGGVGWVLRDEKGNLISTGFRV
                 +A+   ++   ++  Q T   ++PA     ++++ I    W PP  G  K+N DA+ N EK+L G+G V+RDE GN+I+   +V
Subjt:  --------GQADWSEISNRPVDMDQATPEHREPAPTATNDRQATIASVRWMPPAMGLWKLNNDASWNEEKKLGGVGWVLRDEKGNLISTGFRV

XP_024956542.1 uncharacterized protein LOC112498908 [Citrus sinensis]8.2e-1327.23Show/hide
Query:  LEVQASNEASISHNGKMEALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCKTKLETITHLLWGVQSNKEYFK-------------
        L+++     S S + K E  W+I W   +P KIR+  W    ++LP+  NL KR +   P C LCK  +E + H L   ++ K+ ++             
Subjt:  LEVQASNEASISHNGKMEALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCKTKLETITHLLWGVQSNKEYFK-------------

Query:  -------HQMRRAIEYFTGDV-------KTDGQADW-----SEISNRPVDMDQATPE---HREPAPTATNDRQATIASVRWMPPAMGLWKLNNDASWNEE
               H ++R       D+       K + +  W      E     V   +A  E     +P+   ++ +Q  +A + W PP  G  K+N DA+ N E
Subjt:  -------HQMRRAIEYFTGDV-------KTDGQADW-----SEISNRPVDMDQATPE---HREPAPTATNDRQATIASVRWMPPAMGLWKLNNDASWNEE

Query:  KKLGGVGWVLRDEKGNLISTGFRV
        K L G+G V+RDE G + +T  +V
Subjt:  KKLGGVGWVLRDEKGNLISTGFRV

XP_027182101.1 uncharacterized protein LOC113780501 [Coffea eugenioides]1.6e-1326.47Show/hide
Query:  NGKMEALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCKTKLETITHLLWGVQSNKEYFKHQMRRAIEYFTGDVKTDGQ---ADW-
        NG ++ +W   WK   P K+++  W I   ILPT + L  RG+ ++P C+LCK  +E + HL        + +      A+ + T  ++ D     + W 
Subjt:  NGKMEALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCKTKLETITHLLWGVQSNKEYFKHQMRRAIEYFTGDVKTDGQ---ADW-

Query:  ----SEISNRPVDMDQATPEHREPAPTATNDRQATIASVRWMPPAMGLWKLNNDASWNEEKKLGGVGWVLRDEKGNLISTGFRVLHQQWLEALAVSDGLR
            + +  R +++ Q   ++RE   +     + +IA + W  P +G  K N D +   E    GVG V+RDE+GN ++     +  +  +     D L+
Subjt:  ----SEISNRPVDMDQATPEHREPAPTATNDRQATIASVRWMPPAMGLWKLNNDASWNEEKKLGGVGWVLRDEKGNLISTGFRVLHQQWLEALAVSDGLR

Query:  LIPI
        +I I
Subjt:  LIPI

TrEMBL top hitse value%identityAlignment
A0A2N9FI47 CCHC-type domain-containing protein8.0e-1428.79Show/hide
Query:  QASNEASISHNGK--MEALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCKTKLETITHLLWGVQSNKEYFKHQMRRAIEYF--TG
        Q+  +   S NG+   + LW + W   VPPK+R+  W    DILPT+T L  +G+     C+ C+ +LE+  H+LW  +  +  +        E+    G
Subjt:  QASNEASISHNGK--MEALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCKTKLETITHLLWGVQSNKEYFKHQMRRAIEYF--TG

Query:  DVKTDGQADW-------SEISNRPVDMDQATPEHREPAPTATNDRQATIASVRWMPPAMGLWKLNNDASWNEEKKLGGVGWVLRDEKGNLISTGFRVL
        D+    +  W       ++I  R V M     E            +   AS RW PP  G +KLN   S +   KL G+G ++RD  G++++T ++ L
Subjt:  DVKTDGQADW-------SEISNRPVDMDQATPEHREPAPTATNDRQATIASVRWMPPAMGLWKLNNDASWNEEKKLGGVGWVLRDEKGNLISTGFRVL

A0A2S3I1D8 Uncharacterized protein8.8e-1327.96Show/hide
Query:  LEVQASNEASISHNGKMEALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCKTKLETITHLLWGVQSNKEYFKHQMRRAIEYFTG-
        LEV   NE + S       +W   WK  +PPKI++  W + H+ LPT+  L +R +E    C  C    E++ H+++     + ++       ++  TG 
Subjt:  LEVQASNEASISHNGKMEALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCKTKLETITHLLWGVQSNKEYFKHQMRRAIEYFTG-

Query:  DVKTDGQADWSEISNRPVDMDQATPEHREPAPTATNDRQATIASVRWMPPAMGLWKLNNDASWNEEKKLGGVGWVLRDEKGNLISTGFR----VLHQQWL
         +    QA W +                      T D  + +  VRW+ P  G  K+N DA+++     G  G VLRD  G++ +   R    V      
Subjt:  DVKTDGQADWSEISNRPVDMDQATPEHREPAPTATNDRQATIASVRWMPPAMGLWKLNNDASWNEEKKLGGVGWVLRDEKGNLISTGFR----VLHQQWL

Query:  EALAVSDGLRL
        EALAV DGL L
Subjt:  EALAVSDGLRL

A0A7J6GGV5 Uncharacterized protein1.0e-1326.89Show/hide
Query:  LEVQASNEASISHNGKMEALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCKTKLETITHLLWGVQSNKEYFKH---------QMR
        L  +  N A  S N    A W + W + + PK+++  W +FH  +P +T L KRGM +N  C  CK+++E + H LW +    + +KH          ++
Subjt:  LEVQASNEASISHNGKMEALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCKTKLETITHLLWGVQSNKEYFKH---------QMR

Query:  RAIEY---FTGDVKTD----------GQADWSEISNRPVDMDQATPEHREP-----APTATNDRQ-ATIASVRWMPPAMGLWKLNNDASWNEEKKLGGVG
        +A ++     G +  +           Q +     N+ ++ D   P   E      A   TN  Q  +  +V+W PP  G + +N DAS  E +   G+G
Subjt:  RAIEY---FTGDVKTD----------GQADWSEISNRPVDMDQATPEHREP-----APTATNDRQ-ATIASVRWMPPAMGLWKLNNDASWNEEKKLGGVG

Query:  WVLRDEKGNLIS
         ++RD  G L++
Subjt:  WVLRDEKGNLIS

A0A803P4U9 Uncharacterized protein4.7e-1425.61Show/hide
Query:  GWVETDEDMERVANNYFQALFQSSSPHLDAIDDILEVQASNEASISHNGKMEALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCK
        GW  T   +  VA+ Y                  L  +  N A  S N    A W + W + + PK+++  W +FH  +P +T L KRGM +N  C  CK
Subjt:  GWVETDEDMERVANNYFQALFQSSSPHLDAIDDILEVQASNEASISHNGKMEALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCK

Query:  TKLETITHLLWGVQSNKEYFKH---------QMRRAIEY---FTGDVKTD----------GQADWSEISNRPVDMDQATPEHREP-----APTATNDRQ-
        +++E + H LW +    + +KH          +++A ++     G +  +           Q +     N+ ++ D   P   E      A   TN  Q 
Subjt:  TKLETITHLLWGVQSNKEYFKH---------QMRRAIEY---FTGDVKTD----------GQADWSEISNRPVDMDQATPEHREP-----APTATNDRQ-

Query:  ATIASVRWMPPAMGLWKLNNDASWNEEKKLGGVGWVLRDEKGNLIS
         +  +V+W PP  G + +N DAS  E +   G+G ++RD  G L++
Subjt:  ATIASVRWMPPAMGLWKLNNDASWNEEKKLGGVGWVLRDEKGNLIS

A0A803P5M6 Uncharacterized protein6.8e-1327.12Show/hide
Query:  LEVQASNEASISHNGKMEALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCKTKLETITHLLWGVQSNKEY-----FKHQMRRAIE
        L     ++ S S + K    W  +W   +PPKIR+  W +F +ILPT   L KR +  +  C LC +  E+I H L+  +  K+      F+    +A  
Subjt:  LEVQASNEASISHNGKMEALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCKTKLETITHLLWGVQSNKEY-----FKHQMRRAIE

Query:  YFTGD-----------------------VKTD-------GQA-----------------DWSEISNRPVDMDQATPEHREPAPTATNDRQATIASVRWMP
         F GD                       + TD       GQ                  + +++ NRPV    AT  H     T+  D+       RW P
Subjt:  YFTGD-----------------------VKTD-------GQA-----------------DWSEISNRPVDMDQATPEHREPAPTATNDRQATIASVRWMP

Query:  PAMGLWKLNNDASWNEEKKLGGVGWVLRDEKGNLIS
        P    +KLN DA+ N E+K  G+G +LRD++G +++
Subjt:  PAMGLWKLNNDASWNEEKKLGGVGWVLRDEKGNLIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.0e-0529.31Show/hide
Query:  LLWGVQSNKEYFKHQMRRAIEYFTGDVKTDGQADWSEISNRPVDMDQATPEHREPAPTATNDRQATIASVRWMPPAMGLWKLNNDASWNEEKKLGGVGWV
        LLW +  ++      M +  EY   +V      D+ E S R           RE    A+  +     SV+W  P     K N DA+W  E    G+GW+
Subjt:  LLWGVQSNKEYFKHQMRRAIEYFTGDVKTDGQADWSEISNRPVDMDQATPEHREPAPTATNDRQATIASVRWMPPAMGLWKLNNDASWNEEKKLGGVGWV

Query:  LRDEKGNLISTGFRVL
        LR+E G ++  G R L
Subjt:  LRDEKGNLISTGFRVL

AT3G25270.1 Ribonuclease H-like superfamily protein6.7e-0521.15Show/hide
Query:  WKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCKTKLETITHLLWGVQSNKEYFK-----HQ--------MRRAIEYFTGDVKTDGQADWSE
        WK    PKI+   W +    L T  NL +R +  +P C  C  + ET  HL +     ++ ++     HQ        M   +E        + Q     
Subjt:  WKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCKTKLETITHLLWGVQSNKEYFK-----HQ--------MRRAIEYFTGDVKTDGQADWSE

Query:  I----------SNRPVDMDQATPEHREPAPTATND-----------------------RQATIASVRWMPPAMGLWKLNNDASWNEEKKLGGVGWVLRDE
        +          S   +   Q +   +     A ND                       +Q T+A  +W  P     K N D ++N + +    GW++RDE
Subjt:  I----------SNRPVDMDQATPEHREPAPTATND-----------------------RQATIASVRWMPPAMGLWKLNNDASWNEEKKLGGVGWVLRDE

Query:  KGNLISTG
         G  + +G
Subjt:  KGNLISTG

AT4G29090.1 Ribonuclease H-like superfamily protein4.5e-0924.54Show/hide
Query:  MEALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCKTKLETITHLL---------WGVQSNKEYFKHQMRRAIE---YFTGDVKTD
        +  ++   WK+   PKI+   W    + LP    L  R +     CI C +  ET+ HLL         W + S       +   +I    Y+  ++  +
Subjt:  MEALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCKTKLETITHLL---------WGVQSNKEYFKHQMRRAIE---YFTGDVKTD

Query:  GQADWSEISN-----------------------------RPVDMDQATPEHREPAPTATNDRQATIASV-RWMPPAMGLWKLNNDASWNEEKKLGGVGWV
        G   W + S                              R  + D      R  A +     Q   +S  RW PP     K N DA+WN + +  G+GWV
Subjt:  GQADWSEISN-----------------------------RPVDMDQATPEHREPAPTATNDRQATIASV-RWMPPAMGLWKLNNDASWNEEKKLGGVGWV

Query:  LRDEKGNLISTGFRVL
        LR+EKG +   G R L
Subjt:  LRDEKGNLISTGFRVL

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.9e-0438.64Show/hide
Query:  SVRWMPPAMGLWKLNNDASWNEEKKLGGVGWVLRDEKGNLISTG
        + +W PP     K N DAS +E   + G+GW+LR+ +G +I  G
Subjt:  SVRWMPPAMGLWKLNNDASWNEEKKLGGVGWVLRDEKGNLISTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGAAGAGCCACCTGATACCAGAACTCTCAAACATAAACGGCCTAGGCGATTCGAGGAAGTTTGGACAAAATATGAGGATTGGCAGGGAGATCGTTAAGCAAGC
TTGGACTATATCTGAGAGAGGCGGCAGACTTTCTCTAGTTGATAAGCTTGGGAGATGCCTAAGTCAGTTAGACCAGTGGAGCAGACGAAAATGGTTTCACATGAAGGCAA
ATAGCAGAAAGAAGGTCAACAAAATTTGCGGACTCTACGATGCAAGTGGGGGTTGGGTGGAGACCGATGAGGATATGGAGAGGGTTGCCAACAACTATTTTCAAGCTCTG
TTTCAATCGTCTAGCCCCCACTTGGATGCCATTGATGACATCCTGGAGGTTCAAGCATCCAATGAGGCGTCAATATCTCACAATGGGAAGATGGAAGCTCTATGGGATAT
ATATTGGAAAACCCCAGTTCCCCCCAAAATCAGAGTGTGCAGGTGGACAATTTTTCATGACATCCTCCCAACTCGCACAAATCTTATTAAAAGGGGAATGGAAGTTAACC
CACTGTGTATTTTGTGCAAGACAAAGCTGGAAACGATCACACATCTGCTGTGGGGAGTGCAATCAAACAAAGAGTATTTCAAGCATCAAATGAGGAGAGCTATTGAGTAT
TTTACCGGCGATGTGAAGACCGATGGCCAGGCGGATTGGAGCGAGATCTCGAACAGACCCGTTGACATGGATCAAGCTACGCCGGAACACAGAGAGCCTGCCCCAACCGC
GACAAATGATCGGCAAGCGACGATTGCGTCTGTTAGATGGATGCCGCCGGCGATGGGACTCTGGAAGTTGAACAATGACGCGTCCTGGAATGAGGAAAAGAAGTTAGGGG
GAGTGGGCTGGGTGTTGCGAGATGAGAAAGGCAACCTGATTTCTACTGGTTTTCGGGTTCTTCATCAGCAGTGGCTGGAGGCCCTTGCCGTCTCAGATGGTTTGCGTTTG
ATTCCTATCGAGTCCCCTCTGCGTCGCGATGCTGTGCGGTTTCCAGAACTAGCAGGCGCGGATTTGGGCTTGAAACTTGGGCCAACTTCTATTCTTTTTGGATCTTCTCT
TGCATGGTTGACTCTTGGGCTCCCCCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAGAAGAGCCACCTGATACCAGAACTCTCAAACATAAACGGCCTAGGCGATTCGAGGAAGTTTGGACAAAATATGAGGATTGGCAGGGAGATCGTTAAGCAAGC
TTGGACTATATCTGAGAGAGGCGGCAGACTTTCTCTAGTTGATAAGCTTGGGAGATGCCTAAGTCAGTTAGACCAGTGGAGCAGACGAAAATGGTTTCACATGAAGGCAA
ATAGCAGAAAGAAGGTCAACAAAATTTGCGGACTCTACGATGCAAGTGGGGGTTGGGTGGAGACCGATGAGGATATGGAGAGGGTTGCCAACAACTATTTTCAAGCTCTG
TTTCAATCGTCTAGCCCCCACTTGGATGCCATTGATGACATCCTGGAGGTTCAAGCATCCAATGAGGCGTCAATATCTCACAATGGGAAGATGGAAGCTCTATGGGATAT
ATATTGGAAAACCCCAGTTCCCCCCAAAATCAGAGTGTGCAGGTGGACAATTTTTCATGACATCCTCCCAACTCGCACAAATCTTATTAAAAGGGGAATGGAAGTTAACC
CACTGTGTATTTTGTGCAAGACAAAGCTGGAAACGATCACACATCTGCTGTGGGGAGTGCAATCAAACAAAGAGTATTTCAAGCATCAAATGAGGAGAGCTATTGAGTAT
TTTACCGGCGATGTGAAGACCGATGGCCAGGCGGATTGGAGCGAGATCTCGAACAGACCCGTTGACATGGATCAAGCTACGCCGGAACACAGAGAGCCTGCCCCAACCGC
GACAAATGATCGGCAAGCGACGATTGCGTCTGTTAGATGGATGCCGCCGGCGATGGGACTCTGGAAGTTGAACAATGACGCGTCCTGGAATGAGGAAAAGAAGTTAGGGG
GAGTGGGCTGGGTGTTGCGAGATGAGAAAGGCAACCTGATTTCTACTGGTTTTCGGGTTCTTCATCAGCAGTGGCTGGAGGCCCTTGCCGTCTCAGATGGTTTGCGTTTG
ATTCCTATCGAGTCCCCTCTGCGTCGCGATGCTGTGCGGTTTCCAGAACTAGCAGGCGCGGATTTGGGCTTGAAACTTGGGCCAACTTCTATTCTTTTTGGATCTTCTCT
TGCATGGTTGACTCTTGGGCTCCCCCTTTGA
Protein sequenceShow/hide protein sequence
MGKKSHLIPELSNINGLGDSRKFGQNMRIGREIVKQAWTISERGGRLSLVDKLGRCLSQLDQWSRRKWFHMKANSRKKVNKICGLYDASGGWVETDEDMERVANNYFQAL
FQSSSPHLDAIDDILEVQASNEASISHNGKMEALWDIYWKTPVPPKIRVCRWTIFHDILPTRTNLIKRGMEVNPLCILCKTKLETITHLLWGVQSNKEYFKHQMRRAIEY
FTGDVKTDGQADWSEISNRPVDMDQATPEHREPAPTATNDRQATIASVRWMPPAMGLWKLNNDASWNEEKKLGGVGWVLRDEKGNLISTGFRVLHQQWLEALAVSDGLRL
IPIESPLRRDAVRFPELAGADLGLKLGPTSILFGSSLAWLTLGLPL