| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0037581.1 reverse transcriptase [Cucumis melo var. makuwa] | 7.0e-32 | 30.52 | Show/hide |
Query: STGFSSKAGGPLVFSDVLSILGSTSRIRSSIWRKIKGSREPRICVVLFRGISGHTGWESHFHFFR----------------PRGSRSSLQTGELDKT---
STGFSSK GG LVFSD LSIL + ++ I+ REPRI L G F F + PRG+R SLQT E+DKT
Subjt: STGFSSKAGGPLVFSDVLSILGSTSRIRSSIWRKIKGSREPRICVVLFRGISGHTGWESHFHFFR----------------PRGSRSSLQTGELDKT---
Query: ---------------------------------------------VEIELPVPNTLPTSAESSRSSSSTWLELYIES-----------------------
VEIELPVP+ LPTSAESSRS+SSTWLELY ES
Subjt: ---------------------------------------------VEIELPVPNTLPTSAESSRSSSSTWLELYIES-----------------------
Query: -----------------------------------ESCHHVPEDDAGSIRTGCRILP---------------------RVSLKG--------DPVPREV-
ESCHHV DDAG IRTGC ILP R+ G DP EV
Subjt: -----------------------------------ESCHHVPEDDAGSIRTGCRILP---------------------RVSLKG--------DPVPREV-
Query: ------------------------------------------------------------------------------------RMRQGMSDFARSAQEI
+ + ++ +R A+ I
Subjt: ------------------------------------------------------------------------------------RMRQGMSDFARSAQEI
Query: ----------------------VTAIAKWTDFSHLVETALRVEQNIIEEKATLEPSRGAPTASGFRGLEQRRFTPGVNVSGRQDFKRRSGGQLSRQMS
VTAIAKW +FS LVETALRV+Q+I+EEK+ +E SRG T SG RG EQRRFTPGVNVSG QDFKRRSGG+ RQMS
Subjt: ----------------------VTAIAKWTDFSHLVETALRVEQNIIEEKATLEPSRGAPTASGFRGLEQRRFTPGVNVSGRQDFKRRSGGQLSRQMS
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| KAA0062409.1 reverse transcriptase [Cucumis melo var. makuwa] | 9.4e-53 | 41.28 | Show/hide |
Query: MQSQPLQNLCSTWQPLSTGFSSKAGGPLVFSDVLSILGSTSRIRSSIWRKIKGSREPRICVVLFRGISGHTGWESHFHFFRPRGSRSSLQTGELDKT---
MQSQPLQNL +T L TGFSSK GG LVFSD LSIL + ++ I+ + + V+L RG+RSSLQ+GELD T
Subjt: MQSQPLQNLCSTWQPLSTGFSSKAGGPLVFSDVLSILGSTSRIRSSIWRKIKGSREPRICVVLFRGISGHTGWESHFHFFRPRGSRSSLQTGELDKT---
Query: --------------VEIELPVPNTLPTSAESSRSSSSTWLELYIES------------------------------------------------------
VEIELPVP+TLPTSAESS S+SSTWLELY ES
Subjt: --------------VEIELPVPNTLPTSAESSRSSSSTWLELYIES------------------------------------------------------
Query: ----ESCHHVPEDDAGSIRTGCRILPRVSLKGDPVPREVRMRQGMSD-----------------------------------------------------
ESCHHVP DDAG IRTG RILP+V+LKGD VPREVR+RQG+SD
Subjt: ----ESCHHVPEDDAGSIRTGCRILPRVSLKGDPVPREVRMRQGMSD-----------------------------------------------------
Query: -------------------FARSAQ-EI---VTAIAKWTDFSHLVETALRVEQNIIEEKATLEPSRGAPTASGFRGLEQRRFTPGVNVSGRQDFKRRSGG
F R EI VTAIAKWT FS LVETALRVEQ+I+EEK+ +E SRG T SG RG EQRRFTPGVNVSG QDFKRRSG
Subjt: -------------------FARSAQ-EI---VTAIAKWTDFSHLVETALRVEQNIIEEKATLEPSRGAPTASGFRGLEQRRFTPGVNVSGRQDFKRRSGG
Query: QLSRQMS
+ RQMS
Subjt: QLSRQMS
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| TYK03091.1 reverse transcriptase [Cucumis melo var. makuwa] | 7.0e-32 | 30.52 | Show/hide |
Query: STGFSSKAGGPLVFSDVLSILGSTSRIRSSIWRKIKGSREPRICVVLFRGISGHTGWESHFHFFR----------------PRGSRSSLQTGELDKT---
STGFSSK GG LVFSD LSIL + ++ I+ REPRI L G F F + PRG+R SLQT E+DKT
Subjt: STGFSSKAGGPLVFSDVLSILGSTSRIRSSIWRKIKGSREPRICVVLFRGISGHTGWESHFHFFR----------------PRGSRSSLQTGELDKT---
Query: ---------------------------------------------VEIELPVPNTLPTSAESSRSSSSTWLELYIES-----------------------
VEIELPVP+ LPTSAESSRS+SSTWLELY ES
Subjt: ---------------------------------------------VEIELPVPNTLPTSAESSRSSSSTWLELYIES-----------------------
Query: -----------------------------------ESCHHVPEDDAGSIRTGCRILP---------------------RVSLKG--------DPVPREV-
ESCHHV DDAG IRTGC ILP R+ G DP EV
Subjt: -----------------------------------ESCHHVPEDDAGSIRTGCRILP---------------------RVSLKG--------DPVPREV-
Query: ------------------------------------------------------------------------------------RMRQGMSDFARSAQEI
+ + ++ +R A+ I
Subjt: ------------------------------------------------------------------------------------RMRQGMSDFARSAQEI
Query: ----------------------VTAIAKWTDFSHLVETALRVEQNIIEEKATLEPSRGAPTASGFRGLEQRRFTPGVNVSGRQDFKRRSGGQLSRQMS
VTAIAKW +FS LVETALRV+Q+I+EEK+ +E SRG T SG RG EQRRFTPGVNVSG QDFKRRSGG+ RQMS
Subjt: ----------------------VTAIAKWTDFSHLVETALRVEQNIIEEKATLEPSRGAPTASGFRGLEQRRFTPGVNVSGRQDFKRRSGGQLSRQMS
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| TYK07530.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] | 2.1e-28 | 33.98 | Show/hide |
Query: MQSQPLQNLCST---WQ-PLSTGFSSKAGGPLVFSDVLSILGSTSRIRSSIWRKIKGSREPRICVVLFRGISGHTGWESHFHFFRPRGSRSSLQTGELDK
MQSQPLQNL +T W ST F S+ G LVFSD LSIL + + + + VL IS E PRG+R SLQTGELDK
Subjt: MQSQPLQNLCST---WQ-PLSTGFSSKAGGPLVFSDVLSILGSTSRIRSSIWRKIKGSREPRICVVLFRGISGHTGWESHFHFFRPRGSRSSLQTGELDK
Query: T-----------------VEIELPVPNTLPTSAESSRSSSSTWLELYIESESCH------HVPED-----------DAGSIRTG--CRILPRVSLKGDPV
T VEIELPV + LPTSAES S+SSTWLELY S + P D AG +R C + K
Subjt: T-----------------VEIELPVPNTLPTSAESSRSSSSTWLELYIESESCH------HVPED-----------DAGSIRTG--CRILPRVSLKGDPV
Query: PR----------------EVRMRQGMSDFARSAQE-----------------------------------------------------------------
PR + + + RSAQE
Subjt: PR----------------EVRMRQGMSDFARSAQE-----------------------------------------------------------------
Query: --------------------------------------IVTAIAKWTDFSHLVETALRVEQNIIEEKATLEPSRGAPTASGFRGLEQRRFTPGVNVSGRQ
+VTAIAKWT+FS LVETALRVEQ+I+EEK+ +E SRG T SG RG EQRRFTPGVNVSG Q
Subjt: --------------------------------------IVTAIAKWTDFSHLVETALRVEQNIIEEKATLEPSRGAPTASGFRGLEQRRFTPGVNVSGRQ
Query: DFKRRSGGQLSRQMS
DFKRRSGG+ RQMS
Subjt: DFKRRSGGQLSRQMS
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| TYK26572.1 putative Retrotransposon protein [Cucumis melo var. makuwa] | 9.4e-53 | 41.28 | Show/hide |
Query: MQSQPLQNLCSTWQPLSTGFSSKAGGPLVFSDVLSILGSTSRIRSSIWRKIKGSREPRICVVLFRGISGHTGWESHFHFFRPRGSRSSLQTGELDKT---
MQSQPLQNL +T L TGFSSK GG LVFSD LSIL + ++ I+ + + V+L RG+RSSLQ+GELD T
Subjt: MQSQPLQNLCSTWQPLSTGFSSKAGGPLVFSDVLSILGSTSRIRSSIWRKIKGSREPRICVVLFRGISGHTGWESHFHFFRPRGSRSSLQTGELDKT---
Query: --------------VEIELPVPNTLPTSAESSRSSSSTWLELYIES------------------------------------------------------
VEIELPVP+TLPTSAESS S+SSTWLELY ES
Subjt: --------------VEIELPVPNTLPTSAESSRSSSSTWLELYIES------------------------------------------------------
Query: ----ESCHHVPEDDAGSIRTGCRILPRVSLKGDPVPREVRMRQGMSD-----------------------------------------------------
ESCHHVP DDAG IRTG RILP+V+LKGD VPREVR+RQG+SD
Subjt: ----ESCHHVPEDDAGSIRTGCRILPRVSLKGDPVPREVRMRQGMSD-----------------------------------------------------
Query: -------------------FARSAQ-EI---VTAIAKWTDFSHLVETALRVEQNIIEEKATLEPSRGAPTASGFRGLEQRRFTPGVNVSGRQDFKRRSGG
F R EI VTAIAKWT FS LVETALRVEQ+I+EEK+ +E SRG T SG RG EQRRFTPGVNVSG QDFKRRSG
Subjt: -------------------FARSAQ-EI---VTAIAKWTDFSHLVETALRVEQNIIEEKATLEPSRGAPTASGFRGLEQRRFTPGVNVSGRQDFKRRSGG
Query: QLSRQMS
+ RQMS
Subjt: QLSRQMS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T7M6 Reverse transcriptase | 3.4e-32 | 30.52 | Show/hide |
Query: STGFSSKAGGPLVFSDVLSILGSTSRIRSSIWRKIKGSREPRICVVLFRGISGHTGWESHFHFFR----------------PRGSRSSLQTGELDKT---
STGFSSK GG LVFSD LSIL + ++ I+ REPRI L G F F + PRG+R SLQT E+DKT
Subjt: STGFSSKAGGPLVFSDVLSILGSTSRIRSSIWRKIKGSREPRICVVLFRGISGHTGWESHFHFFR----------------PRGSRSSLQTGELDKT---
Query: ---------------------------------------------VEIELPVPNTLPTSAESSRSSSSTWLELYIES-----------------------
VEIELPVP+ LPTSAESSRS+SSTWLELY ES
Subjt: ---------------------------------------------VEIELPVPNTLPTSAESSRSSSSTWLELYIES-----------------------
Query: -----------------------------------ESCHHVPEDDAGSIRTGCRILP---------------------RVSLKG--------DPVPREV-
ESCHHV DDAG IRTGC ILP R+ G DP EV
Subjt: -----------------------------------ESCHHVPEDDAGSIRTGCRILP---------------------RVSLKG--------DPVPREV-
Query: ------------------------------------------------------------------------------------RMRQGMSDFARSAQEI
+ + ++ +R A+ I
Subjt: ------------------------------------------------------------------------------------RMRQGMSDFARSAQEI
Query: ----------------------VTAIAKWTDFSHLVETALRVEQNIIEEKATLEPSRGAPTASGFRGLEQRRFTPGVNVSGRQDFKRRSGGQLSRQMS
VTAIAKW +FS LVETALRV+Q+I+EEK+ +E SRG T SG RG EQRRFTPGVNVSG QDFKRRSGG+ RQMS
Subjt: ----------------------VTAIAKWTDFSHLVETALRVEQNIIEEKATLEPSRGAPTASGFRGLEQRRFTPGVNVSGRQDFKRRSGGQLSRQMS
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| A0A5A7V9N3 Reverse transcriptase | 4.5e-53 | 41.28 | Show/hide |
Query: MQSQPLQNLCSTWQPLSTGFSSKAGGPLVFSDVLSILGSTSRIRSSIWRKIKGSREPRICVVLFRGISGHTGWESHFHFFRPRGSRSSLQTGELDKT---
MQSQPLQNL +T L TGFSSK GG LVFSD LSIL + ++ I+ + + V+L RG+RSSLQ+GELD T
Subjt: MQSQPLQNLCSTWQPLSTGFSSKAGGPLVFSDVLSILGSTSRIRSSIWRKIKGSREPRICVVLFRGISGHTGWESHFHFFRPRGSRSSLQTGELDKT---
Query: --------------VEIELPVPNTLPTSAESSRSSSSTWLELYIES------------------------------------------------------
VEIELPVP+TLPTSAESS S+SSTWLELY ES
Subjt: --------------VEIELPVPNTLPTSAESSRSSSSTWLELYIES------------------------------------------------------
Query: ----ESCHHVPEDDAGSIRTGCRILPRVSLKGDPVPREVRMRQGMSD-----------------------------------------------------
ESCHHVP DDAG IRTG RILP+V+LKGD VPREVR+RQG+SD
Subjt: ----ESCHHVPEDDAGSIRTGCRILPRVSLKGDPVPREVRMRQGMSD-----------------------------------------------------
Query: -------------------FARSAQ-EI---VTAIAKWTDFSHLVETALRVEQNIIEEKATLEPSRGAPTASGFRGLEQRRFTPGVNVSGRQDFKRRSGG
F R EI VTAIAKWT FS LVETALRVEQ+I+EEK+ +E SRG T SG RG EQRRFTPGVNVSG QDFKRRSG
Subjt: -------------------FARSAQ-EI---VTAIAKWTDFSHLVETALRVEQNIIEEKATLEPSRGAPTASGFRGLEQRRFTPGVNVSGRQDFKRRSGG
Query: QLSRQMS
+ RQMS
Subjt: QLSRQMS
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| A0A5D3BTP3 Reverse transcriptase | 3.4e-32 | 30.52 | Show/hide |
Query: STGFSSKAGGPLVFSDVLSILGSTSRIRSSIWRKIKGSREPRICVVLFRGISGHTGWESHFHFFR----------------PRGSRSSLQTGELDKT---
STGFSSK GG LVFSD LSIL + ++ I+ REPRI L G F F + PRG+R SLQT E+DKT
Subjt: STGFSSKAGGPLVFSDVLSILGSTSRIRSSIWRKIKGSREPRICVVLFRGISGHTGWESHFHFFR----------------PRGSRSSLQTGELDKT---
Query: ---------------------------------------------VEIELPVPNTLPTSAESSRSSSSTWLELYIES-----------------------
VEIELPVP+ LPTSAESSRS+SSTWLELY ES
Subjt: ---------------------------------------------VEIELPVPNTLPTSAESSRSSSSTWLELYIES-----------------------
Query: -----------------------------------ESCHHVPEDDAGSIRTGCRILP---------------------RVSLKG--------DPVPREV-
ESCHHV DDAG IRTGC ILP R+ G DP EV
Subjt: -----------------------------------ESCHHVPEDDAGSIRTGCRILP---------------------RVSLKG--------DPVPREV-
Query: ------------------------------------------------------------------------------------RMRQGMSDFARSAQEI
+ + ++ +R A+ I
Subjt: ------------------------------------------------------------------------------------RMRQGMSDFARSAQEI
Query: ----------------------VTAIAKWTDFSHLVETALRVEQNIIEEKATLEPSRGAPTASGFRGLEQRRFTPGVNVSGRQDFKRRSGGQLSRQMS
VTAIAKW +FS LVETALRV+Q+I+EEK+ +E SRG T SG RG EQRRFTPGVNVSG QDFKRRSGG+ RQMS
Subjt: ----------------------VTAIAKWTDFSHLVETALRVEQNIIEEKATLEPSRGAPTASGFRGLEQRRFTPGVNVSGRQDFKRRSGGQLSRQMS
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| A0A5D3C867 DNA/RNA polymerases superfamily protein | 1.0e-28 | 33.98 | Show/hide |
Query: MQSQPLQNLCST---WQ-PLSTGFSSKAGGPLVFSDVLSILGSTSRIRSSIWRKIKGSREPRICVVLFRGISGHTGWESHFHFFRPRGSRSSLQTGELDK
MQSQPLQNL +T W ST F S+ G LVFSD LSIL + + + + VL IS E PRG+R SLQTGELDK
Subjt: MQSQPLQNLCST---WQ-PLSTGFSSKAGGPLVFSDVLSILGSTSRIRSSIWRKIKGSREPRICVVLFRGISGHTGWESHFHFFRPRGSRSSLQTGELDK
Query: T-----------------VEIELPVPNTLPTSAESSRSSSSTWLELYIESESCH------HVPED-----------DAGSIRTG--CRILPRVSLKGDPV
T VEIELPV + LPTSAES S+SSTWLELY S + P D AG +R C + K
Subjt: T-----------------VEIELPVPNTLPTSAESSRSSSSTWLELYIESESCH------HVPED-----------DAGSIRTG--CRILPRVSLKGDPV
Query: PR----------------EVRMRQGMSDFARSAQE-----------------------------------------------------------------
PR + + + RSAQE
Subjt: PR----------------EVRMRQGMSDFARSAQE-----------------------------------------------------------------
Query: --------------------------------------IVTAIAKWTDFSHLVETALRVEQNIIEEKATLEPSRGAPTASGFRGLEQRRFTPGVNVSGRQ
+VTAIAKWT+FS LVETALRVEQ+I+EEK+ +E SRG T SG RG EQRRFTPGVNVSG Q
Subjt: --------------------------------------IVTAIAKWTDFSHLVETALRVEQNIIEEKATLEPSRGAPTASGFRGLEQRRFTPGVNVSGRQ
Query: DFKRRSGGQLSRQMS
DFKRRSGG+ RQMS
Subjt: DFKRRSGGQLSRQMS
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| A0A5D3DSY7 Putative Retrotransposon protein | 4.5e-53 | 41.28 | Show/hide |
Query: MQSQPLQNLCSTWQPLSTGFSSKAGGPLVFSDVLSILGSTSRIRSSIWRKIKGSREPRICVVLFRGISGHTGWESHFHFFRPRGSRSSLQTGELDKT---
MQSQPLQNL +T L TGFSSK GG LVFSD LSIL + ++ I+ + + V+L RG+RSSLQ+GELD T
Subjt: MQSQPLQNLCSTWQPLSTGFSSKAGGPLVFSDVLSILGSTSRIRSSIWRKIKGSREPRICVVLFRGISGHTGWESHFHFFRPRGSRSSLQTGELDKT---
Query: --------------VEIELPVPNTLPTSAESSRSSSSTWLELYIES------------------------------------------------------
VEIELPVP+TLPTSAESS S+SSTWLELY ES
Subjt: --------------VEIELPVPNTLPTSAESSRSSSSTWLELYIES------------------------------------------------------
Query: ----ESCHHVPEDDAGSIRTGCRILPRVSLKGDPVPREVRMRQGMSD-----------------------------------------------------
ESCHHVP DDAG IRTG RILP+V+LKGD VPREVR+RQG+SD
Subjt: ----ESCHHVPEDDAGSIRTGCRILPRVSLKGDPVPREVRMRQGMSD-----------------------------------------------------
Query: -------------------FARSAQ-EI---VTAIAKWTDFSHLVETALRVEQNIIEEKATLEPSRGAPTASGFRGLEQRRFTPGVNVSGRQDFKRRSGG
F R EI VTAIAKWT FS LVETALRVEQ+I+EEK+ +E SRG T SG RG EQRRFTPGVNVSG QDFKRRSG
Subjt: -------------------FARSAQ-EI---VTAIAKWTDFSHLVETALRVEQNIIEEKATLEPSRGAPTASGFRGLEQRRFTPGVNVSGRQDFKRRSGG
Query: QLSRQMS
+ RQMS
Subjt: QLSRQMS
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