; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg008264 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008264
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotransposable element Tf2
Genome locationscaffold5:26797403..26807623
RNA-Seq ExpressionSpg008264
SyntenySpg008264
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025901.1 hypothetical protein E6C27_scaffold34G001890 [Cucumis melo var. makuwa]3.5e-2038.12Show/hide
Query:  SRGR--ASSSRGSRPTSSS-SAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGIVQLRPPVSPSSVTGSSIPSSSTYS
        +RGR  ++SS+G+ P+SSS SAP PMSADQYAM+LGFT                                                              
Subjt:  SRGR--ASSSRGSRPTSSS-SAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGIVQLRPPVSPSSVTGSSIPSSSTYS

Query:  AAVTPEKSNQPQYKTVTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRIL--QMAASDRSASPASSA
                                 +K++FQ+AT+  +KEWF  NGYLQDID  +N +FLN+KSKLLA LAQ T+DADFQR+L   + AS  S S +S  
Subjt:  AAVTPEKSNQPQYKTVTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRIL--QMAASDRSASPASSA

Query:  QGEDE--DPDYDLDDPFLDSQPM
        Q ++E  DP+YDLD+PFLDSQPM
Subjt:  QGEDE--DPDYDLDDPFLDSQPM

KAA0034823.1 hypothetical protein E6C27_scaffold213G00570 [Cucumis melo var. makuwa]8.2e-2564.81Show/hide
Query:  VTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMA--ASDRSASPASSAQGEDE--DPDYDLDD
        + K LKIK W+K+NFQ+AT+  +KEWFA N YLQDID ++N EFLNDKSKLL ALAQ T+DADFQR+L  A  AS  S SP+SS Q ++E  DP+YDLDD
Subjt:  VTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMA--ASDRSASPASSAQGEDE--DPDYDLDD

Query:  PFLDSQPM
          LDSQPM
Subjt:  PFLDSQPM

KAA0049709.1 hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa]1.1e-2948.88Show/hide
Query:  KKDSRGR--ASSSRGSRPTSSS-SAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGIVQLRPPVSPSSVTGSSIPSSS
        K+++RGR  ++SS+G+RP+SSS S P PMSADQYAMDLGFT VTRSRSR   IR   P ESST PP+PS NL+RPSGG+VQ+R PVSPSS   SS P  +
Subjt:  KKDSRGR--ASSSRGSRPTSSS-SAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGIVQLRPPVSPSSVTGSSIPSSS

Query:  TYSAAVTPEKSNQPQYKTVTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQ--MAASDRSASPA
        TYS AVTP+K                                                       +SKLLAALAQ T+DADFQR+L   + AS  S SP+
Subjt:  TYSAAVTPEKSNQPQYKTVTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQ--MAASDRSASPA

Query:  SSAQGEDE--DPDYDLDDPFLDS
        SS Q ++E  D +YDLDDP+LDS
Subjt:  SSAQGEDE--DPDYDLDDPFLDS

KAA0059031.1 polyprotein [Cucumis melo var. makuwa]7.6e-3165.57Show/hide
Query:  PPRPSANLVRPSGGIVQLRPPVSPSSVTGSSIPSSSTYSAAVTPEK----SNQPQYKTVTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNA
        PPRPSANL+R SG  VQ+RP  S SS   SS P S+TYS  VTP+K    ++ PQYK + K LKIKWW K+NFQ+AT+  +KEWFA NGYLQDID ++N 
Subjt:  PPRPSANLVRPSGGIVQLRPPVSPSSVTGSSIPSSSTYSAAVTPEK----SNQPQYKTVTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNA

Query:  EFLNDKSKLLAALAQTTSDADF
        EFLNDKSKLLAALAQ T+DADF
Subjt:  EFLNDKSKLLAALAQTTSDADF

TYJ98361.1 hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa]3.3e-3451.77Show/hide
Query:  KKDSRGR--ASSSRGSRPTSSS-SAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGIVQLRPPVSPSSVTGSSIPSSS
        K  +RGR  ++SS+G+ P+SSS SAP PMS DQYAMDLG+T V +SRS+  GI    PMESST PPRPS NL+ P G ++Q+R   SPSS   SS    +
Subjt:  KKDSRGR--ASSSRGSRPTSSS-SAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGIVQLRPPVSPSSVTGSSIPSSS

Query:  TYSAAVTPEKSNQPQYKTVTKILK-IKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASDRSAS-PA
        TYS AVTP+K   P+ +  +   K I  +D           ++  +  NG LQDID ++NA+FLNDK K LAAL Q T DADFQR+L  A +  S+S PA
Subjt:  TYSAAVTPEKSNQPQYKTVTKILK-IKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASDRSAS-PA

Query:  SSAQGEDE---DPDYDLDDPFLDSQP
         S   EDE   D +YDLDDPFLDSQP
Subjt:  SSAQGEDE---DPDYDLDDPFLDSQP

TrEMBL top hitse value%identityAlignment
A0A5A7SWC0 Uncharacterized protein3.9e-2564.81Show/hide
Query:  VTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMA--ASDRSASPASSAQGEDE--DPDYDLDD
        + K LKIK W+K+NFQ+AT+  +KEWFA N YLQDID ++N EFLNDKSKLL ALAQ T+DADFQR+L  A  AS  S SP+SS Q ++E  DP+YDLDD
Subjt:  VTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMA--ASDRSASPASSAQGEDE--DPDYDLDD

Query:  PFLDSQPM
          LDSQPM
Subjt:  PFLDSQPM

A0A5A7U8A0 Uncharacterized protein5.3e-3048.88Show/hide
Query:  KKDSRGR--ASSSRGSRPTSSS-SAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGIVQLRPPVSPSSVTGSSIPSSS
        K+++RGR  ++SS+G+RP+SSS S P PMSADQYAMDLGFT VTRSRSR   IR   P ESST PP+PS NL+RPSGG+VQ+R PVSPSS   SS P  +
Subjt:  KKDSRGR--ASSSRGSRPTSSS-SAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGIVQLRPPVSPSSVTGSSIPSSS

Query:  TYSAAVTPEKSNQPQYKTVTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQ--MAASDRSASPA
        TYS AVTP+K                                                       +SKLLAALAQ T+DADFQR+L   + AS  S SP+
Subjt:  TYSAAVTPEKSNQPQYKTVTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQ--MAASDRSASPA

Query:  SSAQGEDE--DPDYDLDDPFLDS
        SS Q ++E  D +YDLDDP+LDS
Subjt:  SSAQGEDE--DPDYDLDDPFLDS

A0A5A7UZX0 Polyprotein3.7e-3165.57Show/hide
Query:  PPRPSANLVRPSGGIVQLRPPVSPSSVTGSSIPSSSTYSAAVTPEK----SNQPQYKTVTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNA
        PPRPSANL+R SG  VQ+RP  S SS   SS P S+TYS  VTP+K    ++ PQYK + K LKIKWW K+NFQ+AT+  +KEWFA NGYLQDID ++N 
Subjt:  PPRPSANLVRPSGGIVQLRPPVSPSSVTGSSIPSSSTYSAAVTPEK----SNQPQYKTVTKILKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNA

Query:  EFLNDKSKLLAALAQTTSDADF
        EFLNDKSKLLAALAQ T+DADF
Subjt:  EFLNDKSKLLAALAQTTSDADF

A0A5D3BI61 Uncharacterized protein1.6e-3451.77Show/hide
Query:  KKDSRGR--ASSSRGSRPTSSS-SAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGIVQLRPPVSPSSVTGSSIPSSS
        K  +RGR  ++SS+G+ P+SSS SAP PMS DQYAMDLG+T V +SRS+  GI    PMESST PPRPS NL+ P G ++Q+R   SPSS   SS    +
Subjt:  KKDSRGR--ASSSRGSRPTSSS-SAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGIVQLRPPVSPSSVTGSSIPSSS

Query:  TYSAAVTPEKSNQPQYKTVTKILK-IKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASDRSAS-PA
        TYS AVTP+K   P+ +  +   K I  +D           ++  +  NG LQDID ++NA+FLNDK K LAAL Q T DADFQR+L  A +  S+S PA
Subjt:  TYSAAVTPEKSNQPQYKTVTKILK-IKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASDRSAS-PA

Query:  SSAQGEDE---DPDYDLDDPFLDSQP
         S   EDE   D +YDLDDPFLDSQP
Subjt:  SSAQGEDE---DPDYDLDDPFLDSQP

A0A5D3CKX1 Uncharacterized protein1.7e-2063.25Show/hide
Query:  KKDSRGR--ASSSRGSRPTSSS-SAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGIVQLRPPVSPSSVTGSSIPSSS
        K   RGR  ++SS+G+RP+SSS SAP PMSADQY MDLGFT V RSRSR   IR   P ESST PPRP ANL+RPSG +VQ+RPP SPSS   SS P  +
Subjt:  KKDSRGR--ASSSRGSRPTSSS-SAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGIVQLRPPVSPSSVTGSSIPSSS

Query:  TYSAAVTPEKSNQPQYK
        TYS AVTP+K   P+ K
Subjt:  TYSAAVTPEKSNQPQYK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGATCTGCCTGGGGTACGGTTTGAGCTTGATCCAGAAATTGAAAGGACATTTAGGAACAGAAGGAGGGAGCAGCGCAGAAACCAGATGGAGAACGTGCCGCAACT
TCCGCAGGTTCCTGAAGGTCCAGCAGCAGCGAACCCCCAGCAGAATCCCTGCGAAGGACTGTTGCCGGTTGGTGGTCCCGGTTGTAAGACGCCAAGAGAGCGCGGTGAAT
CCGTTGGTCAGCCTACCTCGCCTTCTCGCCAGAAGAGTAAGTTAAGTTCTCTCATCTCTCATTCTTCTCCATTGCTTGATGCTTCAAGCATTCCCTTCCCATTCCCTATC
TTATATAGACTCCCACAAGTCGTTCTTGGCCCGGAGTATAGTAGGGAAGACTCTAGAGAACATGCATGCTTTAGGAGTAAAATTGAATGTCTTAAGTGCTTTCGATCTTC
AATTGCTTCCGCATGTGTAATATGTACACCTTCATGTCCAACCGCTAGAATCAATGAGCTTGATATAGAAGAAGAGTATTCTTCTATCTATGACAGCTCTGATCAAGAGT
TGAATGAATTTCAATTCAACGACACAGATTCAGAGGTCTCTAGCGATAGTCAGAGCAAAGAATCTGAAGGCGTCAAAGCTTGCAAAAAGGACTCAAGAGGCAGAGCCTCC
TCTTCAAGGGGCAGTCGCCCAACTTCTTCTTCCTCTGCACCTCCTCCCATGAGTGCAGATCAATATGCTATGGATCTTGGGTTCACCCCGGTGACCCGATCCAGATCAAG
GCAAGGCGGTATACGCCCGATGCCTCCAATGGAGTCATCAACTCCACCTCCAAGGCCTTCGGCCAACCTCGTCCGTCCTTCAGGCGGAATCGTTCAATTGAGACCTCCTG
TCTCTCCCTCTTCAGTTACGGGATCATCAATCCCATCTTCTTCAACCTACTCTGCGGCGGTAACACCCGAAAAGAGCAATCAACCTCAGTACAAAACCGTCACAAAGATT
CTAAAGATCAAGTGGTGGGATAAATTCAATTTTCAGAACGCAACCCTCAACAAAGTTAAAGAGTGGTTTGCAGCCAATGGTTATCTTCAGGATATCGACATCAAGAGAAA
CGCAGAGTTTCTCAATGACAAATCAAAGCTCCTAGCAGCTCTAGCTCAGACTACATCTGATGCAGATTTTCAAAGAATTCTCCAGATGGCGGCTTCAGACAGAAGCGCGT
CCCCAGCTTCTTCTGCTCAAGGAGAAGACGAAGATCCGGATTACGATCTGGACGACCCGTTCCTCGACTCACAACCCATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGATCTGCCTGGGGTACGGTTTGAGCTTGATCCAGAAATTGAAAGGACATTTAGGAACAGAAGGAGGGAGCAGCGCAGAAACCAGATGGAGAACGTGCCGCAACT
TCCGCAGGTTCCTGAAGGTCCAGCAGCAGCGAACCCCCAGCAGAATCCCTGCGAAGGACTGTTGCCGGTTGGTGGTCCCGGTTGTAAGACGCCAAGAGAGCGCGGTGAAT
CCGTTGGTCAGCCTACCTCGCCTTCTCGCCAGAAGAGTAAGTTAAGTTCTCTCATCTCTCATTCTTCTCCATTGCTTGATGCTTCAAGCATTCCCTTCCCATTCCCTATC
TTATATAGACTCCCACAAGTCGTTCTTGGCCCGGAGTATAGTAGGGAAGACTCTAGAGAACATGCATGCTTTAGGAGTAAAATTGAATGTCTTAAGTGCTTTCGATCTTC
AATTGCTTCCGCATGTGTAATATGTACACCTTCATGTCCAACCGCTAGAATCAATGAGCTTGATATAGAAGAAGAGTATTCTTCTATCTATGACAGCTCTGATCAAGAGT
TGAATGAATTTCAATTCAACGACACAGATTCAGAGGTCTCTAGCGATAGTCAGAGCAAAGAATCTGAAGGCGTCAAAGCTTGCAAAAAGGACTCAAGAGGCAGAGCCTCC
TCTTCAAGGGGCAGTCGCCCAACTTCTTCTTCCTCTGCACCTCCTCCCATGAGTGCAGATCAATATGCTATGGATCTTGGGTTCACCCCGGTGACCCGATCCAGATCAAG
GCAAGGCGGTATACGCCCGATGCCTCCAATGGAGTCATCAACTCCACCTCCAAGGCCTTCGGCCAACCTCGTCCGTCCTTCAGGCGGAATCGTTCAATTGAGACCTCCTG
TCTCTCCCTCTTCAGTTACGGGATCATCAATCCCATCTTCTTCAACCTACTCTGCGGCGGTAACACCCGAAAAGAGCAATCAACCTCAGTACAAAACCGTCACAAAGATT
CTAAAGATCAAGTGGTGGGATAAATTCAATTTTCAGAACGCAACCCTCAACAAAGTTAAAGAGTGGTTTGCAGCCAATGGTTATCTTCAGGATATCGACATCAAGAGAAA
CGCAGAGTTTCTCAATGACAAATCAAAGCTCCTAGCAGCTCTAGCTCAGACTACATCTGATGCAGATTTTCAAAGAATTCTCCAGATGGCGGCTTCAGACAGAAGCGCGT
CCCCAGCTTCTTCTGCTCAAGGAGAAGACGAAGATCCGGATTACGATCTGGACGACCCGTTCCTCGACTCACAACCCATGTGA
Protein sequenceShow/hide protein sequence
MSDLPGVRFELDPEIERTFRNRRREQRRNQMENVPQLPQVPEGPAAANPQQNPCEGLLPVGGPGCKTPRERGESVGQPTSPSRQKSKLSSLISHSSPLLDASSIPFPFPI
LYRLPQVVLGPEYSREDSREHACFRSKIECLKCFRSSIASACVICTPSCPTARINELDIEEEYSSIYDSSDQELNEFQFNDTDSEVSSDSQSKESEGVKACKKDSRGRAS
SSRGSRPTSSSSAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGIVQLRPPVSPSSVTGSSIPSSSTYSAAVTPEKSNQPQYKTVTKI
LKIKWWDKFNFQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASDRSASPASSAQGEDEDPDYDLDDPFLDSQPM