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Spg008288 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008288
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCCHC-type domain-containing protein
Genome locationscaffold5:27361971..27364091
RNA-Seq ExpressionSpg008288
SyntenySpg008288
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040420.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]2.0e-1161.11Show/hide
Query:  GSNARFW--LFD--------RPRGNRSSLQTKKLAKTVEIELPVPDTLPTSSESSRSSSSTWVELYIESVYI
        G+   FW  LF         RPRGNR SLQT KL KTVEIELP+PDTLPT +ES  S+SSTW+ELY ESV++
Subjt:  GSNARFW--LFD--------RPRGNRSSLQTKKLAKTVEIELPVPDTLPTSSESSRSSSSTWVELYIESVYI

KAA0052218.1 uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa]2.8e-1343.85Show/hide
Query:  MAESGFNLPIFGFLFGLSYTRRTK-RALNFRANQEDLWFSLIFRAFWGVQVESEAISGKTTYGSNARFWLFDRPRGNRSSLQTKKLAKTVEIELPVPDTL
        +AESG N      LFGLSY    +  +  F +               G  V S+A+S                PRGNR +L T KL KTVEIELPVPDTL
Subjt:  MAESGFNLPIFGFLFGLSYTRRTK-RALNFRANQEDLWFSLIFRAFWGVQVESEAISGKTTYGSNARFWLFDRPRGNRSSLQTKKLAKTVEIELPVPDTL

Query:  PTSSESSRSSSSTWVELYIESVYIVNVFVR
        PTS+ESS+S+SSTW+ELY ESV++  +F +
Subjt:  PTSSESSRSSSSTWVELYIESVYIVNVFVR

KAA0062263.1 hypothetical protein E6C27_scaffold679G00320 [Cucumis melo var. makuwa]2.4e-1275.47Show/hide
Query:  DRPRGNRSSLQTKKLAKTVEIELPVPDTLPTSSESSRSSSSTWVELYIESVYI
        + PRGNR SLQ  KL KTVEIELP+PDTLPTSSESS+S+SSTW+ELY ESV++
Subjt:  DRPRGNRSSLQTKKLAKTVEIELPVPDTLPTSSESSRSSSSTWVELYIESVYI

KAA0066795.1 uncharacterized protein E6C27_scaffold271G001440 [Cucumis melo var. makuwa]6.3e-1346.22Show/hide
Query:  GFNLPIFGFLFGLSYTRRTKRALNFRANQEDLWFSLIFRAFWGVQVESEAISGKTTYGSNARFWLFDRPRGNRSSLQTKKLAKTVEIELPVPDTLPTSSE
        G  + ++  LFGLSY   TK   +                  GV V S+A+S    + S+ + +L   PRGNR SLQT++L KT  IELPVPDTLPTS+E
Subjt:  GFNLPIFGFLFGLSYTRRTKRALNFRANQEDLWFSLIFRAFWGVQVESEAISGKTTYGSNARFWLFDRPRGNRSSLQTKKLAKTVEIELPVPDTLPTSSE

Query:  SSRSSSSTWVELYIESVYI
        SS S+SSTW+ELY ESV++
Subjt:  SSRSSSSTWVELYIESVYI

TYJ96965.1 uncharacterized protein E5676_scaffold506G00070 [Cucumis melo var. makuwa]1.7e-1352.25Show/hide
Query:  RANQEDLWFSLIFRA--FWG-------VQVESEAISG--------KTTYGSNARFWLFDRPRGNRSSLQTKKLAKTVEIELPVPDTLPTSSESSRSSSST
        R+N+E+L  +L  R   F G        QVESEA+ G         TT+      W    PRGNR S QT KL KTVEIELPVPDTLPTS+ESS S+SST
Subjt:  RANQEDLWFSLIFRA--FWG-------VQVESEAISG--------KTTYGSNARFWLFDRPRGNRSSLQTKKLAKTVEIELPVPDTLPTSSESSRSSSST

Query:  WVELYIESVYI
        W+ELY ESV++
Subjt:  WVELYIESVYI

TrEMBL top hitse value%identityAlignment
A0A5A7TAS6 NBS-LRR type resistance protein9.9e-1261.11Show/hide
Query:  GSNARFW--LFD--------RPRGNRSSLQTKKLAKTVEIELPVPDTLPTSSESSRSSSSTWVELYIESVYI
        G+   FW  LF         RPRGNR SLQT KL KTVEIELP+PDTLPT +ES  S+SSTW+ELY ESV++
Subjt:  GSNARFW--LFD--------RPRGNRSSLQTKKLAKTVEIELPVPDTLPTSSESSRSSSSTWVELYIESVYI

A0A5A7UAH6 CCHC-type domain-containing protein1.4e-1343.85Show/hide
Query:  MAESGFNLPIFGFLFGLSYTRRTK-RALNFRANQEDLWFSLIFRAFWGVQVESEAISGKTTYGSNARFWLFDRPRGNRSSLQTKKLAKTVEIELPVPDTL
        +AESG N      LFGLSY    +  +  F +               G  V S+A+S                PRGNR +L T KL KTVEIELPVPDTL
Subjt:  MAESGFNLPIFGFLFGLSYTRRTK-RALNFRANQEDLWFSLIFRAFWGVQVESEAISGKTTYGSNARFWLFDRPRGNRSSLQTKKLAKTVEIELPVPDTL

Query:  PTSSESSRSSSSTWVELYIESVYIVNVFVR
        PTS+ESS+S+SSTW+ELY ESV++  +F +
Subjt:  PTSSESSRSSSSTWVELYIESVYIVNVFVR

A0A5A7V2F2 Uncharacterized protein1.2e-1275.47Show/hide
Query:  DRPRGNRSSLQTKKLAKTVEIELPVPDTLPTSSESSRSSSSTWVELYIESVYI
        + PRGNR SLQ  KL KTVEIELP+PDTLPTSSESS+S+SSTW+ELY ESV++
Subjt:  DRPRGNRSSLQTKKLAKTVEIELPVPDTLPTSSESSRSSSSTWVELYIESVYI

A0A5D3BET3 Uncharacterized protein8.1e-1452.25Show/hide
Query:  RANQEDLWFSLIFRA--FWG-------VQVESEAISG--------KTTYGSNARFWLFDRPRGNRSSLQTKKLAKTVEIELPVPDTLPTSSESSRSSSST
        R+N+E+L  +L  R   F G        QVESEA+ G         TT+      W    PRGNR S QT KL KTVEIELPVPDTLPTS+ESS S+SST
Subjt:  RANQEDLWFSLIFRA--FWG-------VQVESEAISG--------KTTYGSNARFWLFDRPRGNRSSLQTKKLAKTVEIELPVPDTLPTSSESSRSSSST

Query:  WVELYIESVYI
        W+ELY ESV++
Subjt:  WVELYIESVYI

A0A5D3DWP3 Uncharacterized protein3.1e-1346.22Show/hide
Query:  GFNLPIFGFLFGLSYTRRTKRALNFRANQEDLWFSLIFRAFWGVQVESEAISGKTTYGSNARFWLFDRPRGNRSSLQTKKLAKTVEIELPVPDTLPTSSE
        G  + ++  LFGLSY   TK   +                  GV V S+A+S    + S+ + +L   PRGNR SLQT++L KT  IELPVPDTLPTS+E
Subjt:  GFNLPIFGFLFGLSYTRRTKRALNFRANQEDLWFSLIFRAFWGVQVESEAISGKTTYGSNARFWLFDRPRGNRSSLQTKKLAKTVEIELPVPDTLPTSSE

Query:  SSRSSSSTWVELYIESVYI
        SS S+SSTW+ELY ESV++
Subjt:  SSRSSSSTWVELYIESVYI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAATCTGGGTTCAACCTGCCCATCTTTGGTTTTTTATTCGGTTTGAGCTACACAAGAAGAACTAAGAGAGCACTGAATTTTCGTGCAAACCAGGAGGATCTCTG
GTTTTCTCTGATTTTTCGAGCATTCTGGGGTGTCCAAGTTGAATCAGAAGCTATATCTGGCAAGACTACTTATGGTTCTAATGCTCGGTTTTGGTTGTTTGACAGGCCAA
GAGGAAATAGGTCGAGTCTACAGACCAAGAAACTAGCTAAAACAGTAGAGATCGAGCTCCCAGTGCCTGATACACTGCCAACGTCTTCTGAAAGTTCCAGATCAAGCTCC
AGTACGTGGGTGGAGTTGTATATTGAGTCTGTCTATATTGTAAATGTTTTTGTAAGGATTGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAATCTGGGTTCAACCTGCCCATCTTTGGTTTTTTATTCGGTTTGAGCTACACAAGAAGAACTAAGAGAGCACTGAATTTTCGTGCAAACCAGGAGGATCTCTG
GTTTTCTCTGATTTTTCGAGCATTCTGGGGTGTCCAAGTTGAATCAGAAGCTATATCTGGCAAGACTACTTATGGTTCTAATGCTCGGTTTTGGTTGTTTGACAGGCCAA
GAGGAAATAGGTCGAGTCTACAGACCAAGAAACTAGCTAAAACAGTAGAGATCGAGCTCCCAGTGCCTGATACACTGCCAACGTCTTCTGAAAGTTCCAGATCAAGCTCC
AGTACGTGGGTGGAGTTGTATATTGAGTCTGTCTATATTGTAAATGTTTTTGTAAGGATTGAATAA
Protein sequenceShow/hide protein sequence
MAESGFNLPIFGFLFGLSYTRRTKRALNFRANQEDLWFSLIFRAFWGVQVESEAISGKTTYGSNARFWLFDRPRGNRSSLQTKKLAKTVEIELPVPDTLPTSSESSRSSS
STWVELYIESVYIVNVFVRIE