; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg008311 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008311
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold7:36415749..36431734
RNA-Seq ExpressionSpg008311
SyntenySpg008311
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0005488 - binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051980.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]9.9e-3062.69Show/hide
Query:  RPRGNRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVETELPMPDTLPTSSESSRSSSS----------------YFPNQVMSGLHHVYVER
        RPRGNR+SLQTGELDKT              L TLSVLRDNDAVVE ELP+PDTLPTS+ESS S+SS                YF NQVMSGLH V    
Subjt:  RPRGNRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVETELPMPDTLPTSSESSRSSSS----------------YFPNQVMSGLHHVYVER

Query:  FSVSIGSIGIVRGDDVCWLHAVFRAKLAGGPGGG
        F+VS+GS  IVRGD+VCWLHAVF AK AGGPGGG
Subjt:  FSVSIGSIGIVRGDDVCWLHAVFRAKLAGGPGGG

KAA0062409.1 reverse transcriptase [Cucumis melo var. makuwa]7.6e-3061.76Show/hide
Query:  RGNRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVETELPMPDTLPTSSESSRSSSS----------------YFPNQVMSGLHHVYVERFS
        RGNRSSLQ+GELD T             PL TLSVLRDNDAVVE ELP+PDTLPTS+ESS S+SS                YF NQVMS LH V    FS
Subjt:  RGNRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVETELPMPDTLPTSSESSRSSSS----------------YFPNQVMSGLHHVYVERFS

Query:  VSIGSIGIVRGDDVCWLHAVFRAKLAGGPGGGADNL
        V +GS GIVRGDDVCWLHAVFRAK  GGPGGG   L
Subjt:  VSIGSIGIVRGDDVCWLHAVFRAKLAGGPGGGADNL

KAA0064296.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.2e-3067.8Show/hide
Query:  RPRGNRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVETELPMPDTLPTSSESSRSSSSYFPNQVMSGLHHVYVERFSVSIGSIGIVRGDDV
        +PRGN+ SLQTGELDKT             PL T SVL DNDAVVE EL +PDTLPTS+ES  S+SSYF NQVMSGLH V    F+VS+GS GIVRGDDV
Subjt:  RPRGNRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVETELPMPDTLPTSSESSRSSSSYFPNQVMSGLHHVYVERFSVSIGSIGIVRGDDV

Query:  CWLHAVFRAKLAGGPGGG
        C LH VFRAK AGGPGGG
Subjt:  CWLHAVFRAKLAGGPGGG

TYK11835.1 uncharacterized protein E5676_scaffold152G00520 [Cucumis melo var. makuwa]7.9e-2754.14Show/hide
Query:  FFRPRGNRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVETELPMPDTLPTSSESSRSSSS----------------YFPNQVMSGLHHVYV
        +  PRGNR SLQTGELDKT              L TLSVLRDN+AV+  ELP+PDTLPTS+ESS S+SS                 F NQVMS LH V  
Subjt:  FFRPRGNRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVETELPMPDTLPTSSESSRSSSS----------------YFPNQVMSGLHHVYV

Query:  ERFSVSIGSIGIVRGDDVCWLHAVFRAKLAGGPGGGADNLCSSSSLFSATVGSFLFS
          F+VS+GS GIVRGDDVCWLHAVFRAK  GGPGGG     SS+       GS  F+
Subjt:  ERFSVSIGSIGIVRGDDVCWLHAVFRAKLAGGPGGGADNLCSSSSLFSATVGSFLFS

TYK26572.1 putative Retrotransposon protein [Cucumis melo var. makuwa]7.6e-3061.76Show/hide
Query:  RGNRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVETELPMPDTLPTSSESSRSSSS----------------YFPNQVMSGLHHVYVERFS
        RGNRSSLQ+GELD T             PL TLSVLRDNDAVVE ELP+PDTLPTS+ESS S+SS                YF NQVMS LH V    FS
Subjt:  RGNRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVETELPMPDTLPTSSESSRSSSS----------------YFPNQVMSGLHHVYVERFS

Query:  VSIGSIGIVRGDDVCWLHAVFRAKLAGGPGGGADNL
        V +GS GIVRGDDVCWLHAVFRAK  GGPGGG   L
Subjt:  VSIGSIGIVRGDDVCWLHAVFRAKLAGGPGGGADNL

TrEMBL top hitse value%identityAlignment
A0A5A7U9X4 DNA/RNA polymerases superfamily protein4.8e-3062.69Show/hide
Query:  RPRGNRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVETELPMPDTLPTSSESSRSSSS----------------YFPNQVMSGLHHVYVER
        RPRGNR+SLQTGELDKT              L TLSVLRDNDAVVE ELP+PDTLPTS+ESS S+SS                YF NQVMSGLH V    
Subjt:  RPRGNRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVETELPMPDTLPTSSESSRSSSS----------------YFPNQVMSGLHHVYVER

Query:  FSVSIGSIGIVRGDDVCWLHAVFRAKLAGGPGGG
        F+VS+GS  IVRGD+VCWLHAVF AK AGGPGGG
Subjt:  FSVSIGSIGIVRGDDVCWLHAVFRAKLAGGPGGG

A0A5A7V9N3 Reverse transcriptase3.7e-3061.76Show/hide
Query:  RGNRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVETELPMPDTLPTSSESSRSSSS----------------YFPNQVMSGLHHVYVERFS
        RGNRSSLQ+GELD T             PL TLSVLRDNDAVVE ELP+PDTLPTS+ESS S+SS                YF NQVMS LH V    FS
Subjt:  RGNRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVETELPMPDTLPTSSESSRSSSS----------------YFPNQVMSGLHHVYVERFS

Query:  VSIGSIGIVRGDDVCWLHAVFRAKLAGGPGGGADNL
        V +GS GIVRGDDVCWLHAVFRAK  GGPGGG   L
Subjt:  VSIGSIGIVRGDDVCWLHAVFRAKLAGGPGGGADNL

A0A5A7VD33 Putative DNA/RNA polymerases superfamily protein5.7e-3167.8Show/hide
Query:  RPRGNRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVETELPMPDTLPTSSESSRSSSSYFPNQVMSGLHHVYVERFSVSIGSIGIVRGDDV
        +PRGN+ SLQTGELDKT             PL T SVL DNDAVVE EL +PDTLPTS+ES  S+SSYF NQVMSGLH V    F+VS+GS GIVRGDDV
Subjt:  RPRGNRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVETELPMPDTLPTSSESSRSSSSYFPNQVMSGLHHVYVERFSVSIGSIGIVRGDDV

Query:  CWLHAVFRAKLAGGPGGG
        C LH VFRAK AGGPGGG
Subjt:  CWLHAVFRAKLAGGPGGG

A0A5D3CJX3 CCHC-type domain-containing protein3.8e-2754.14Show/hide
Query:  FFRPRGNRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVETELPMPDTLPTSSESSRSSSS----------------YFPNQVMSGLHHVYV
        +  PRGNR SLQTGELDKT              L TLSVLRDN+AV+  ELP+PDTLPTS+ESS S+SS                 F NQVMS LH V  
Subjt:  FFRPRGNRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVETELPMPDTLPTSSESSRSSSS----------------YFPNQVMSGLHHVYV

Query:  ERFSVSIGSIGIVRGDDVCWLHAVFRAKLAGGPGGGADNLCSSSSLFSATVGSFLFS
          F+VS+GS GIVRGDDVCWLHAVFRAK  GGPGGG     SS+       GS  F+
Subjt:  ERFSVSIGSIGIVRGDDVCWLHAVFRAKLAGGPGGGADNLCSSSSLFSATVGSFLFS

A0A5D3DSY7 Putative Retrotransposon protein3.7e-3061.76Show/hide
Query:  RGNRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVETELPMPDTLPTSSESSRSSSS----------------YFPNQVMSGLHHVYVERFS
        RGNRSSLQ+GELD T             PL TLSVLRDNDAVVE ELP+PDTLPTS+ESS S+SS                YF NQVMS LH V    FS
Subjt:  RGNRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVETELPMPDTLPTSSESSRSSSS----------------YFPNQVMSGLHHVYVERFS

Query:  VSIGSIGIVRGDDVCWLHAVFRAKLAGGPGGGADNL
        V +GS GIVRGDDVCWLHAVFRAK  GGPGGG   L
Subjt:  VSIGSIGIVRGDDVCWLHAVFRAKLAGGPGGGADNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGGGAATCTCGTTTTCATTTCTTCAGGCCAAGAGGAAATAGGTCGAGCCTACAAACCGGGGAACTAGATAAGACTCCCGAGGCTATATGGTACCGTGTGCACAC
AGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTAGAGACCGAGCTCCCGATGCCTGATACACTGCCAACGTCTTCTGAAAGTTCTAGAT
CAAGCTCCAGTTACTTTCCAAACCAGGTTATGTCAGGGCTGCACCATGTGTATGTTGAAAGGTTCAGCGTTTCAATAGGGTCAATAGGGATCGTTAGAGGTGACGATGTC
TGTTGGCTTCACGCCGTCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAGGGGGCGCAGATAATCTTTGCAGCAGTAGCTCCCTGTTTTCAGCTACAGTAGGTTCGTTTCT
CTTTTCTCTTCTTTGTGGCTTGCGTTTAAGCATTCCTCGCCCTCGATCTCTCACCCTTGGACCATTCTCCCTCTATTGCTATCGTTTTCCAGCATTCACCGGCAGGTCAG
TGGCTTGTAGGCAGAAGTTTCGGTGGTTGTGCAGCGTAGTCACGCGACAGCAAGCTTTCGGGTTGTCTCTTCATCGTTTTCAGCGTGAGATCAGTGTGGGTTTTCGTGGC
ATTCGAGATTGTATTTGTCGTGTTGGAGTAGAATTTGAGGGCTTGGACAACAAGCTTAGTTTCTGTTTATGCACGCTAGCGTGTGCACTCTCAGTTCAGGACGAGGTTGA
GCTTATGATTAGGCACGTTGTACATGCGCCAGGTGGCACCAGGCATGTTTACATGCGTCAGTGGTACTTGAGGGCGTTGGCGTTTGGCGAGGGTCGTTGCTTGACTGGCT
ATGGGATTGCAGCTGTAACGACCCCACTTTCCATCCTGGGATCCCAGTTAAAACAGAACAAAAGATTGCAATGCAAGTTCAAAAGAAGAATTTCGAAACATAAAATGCGG
AAGACTATCCTAAGGAAATCCATGGCTCAGCGGCACTCCGTCACGCGTTCTGTACACCTTTACCTCTACCTGCATAAGTTACTTACATCGAGTGACAGCGGTAATCAGAT
TCGAGCGACGAAGAAACAAACAGATCTGGACGCAGCGGCGGCGGCTTGCGCGACTTGCTGGTTGAACGTGGGGCGGCAGCAGCGTGAGGCTGTTATCGACGGCGTGCGAC
GGACCGACGGCAACGACACTCGCTTACGTCGTAAGCATCAGAATTCCCATAGCCAAGTACAAGTAAGCACGCCTCGTCATCGCCAGACTATGCCTCCACGTATTCAAGGT
CGAGGATGGGGTCGTGGACGTGGTAGGGGTCATGTACCTCTAGCGCAAGTGGTTCCTCCAGTGGGTCACCAGGCTAACAATGGACCCGAGATTCAGATGCCTGCACCGCC
TGCACACCCAACGCAGGCACAGATAGATTGTATTTGTCGTGTTGGAGCAGAATTTGAGGGCCTGGACAACAAGCCTAGTTTCTGTTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGGGAATCTCGTTTTCATTTCTTCAGGCCAAGAGGAAATAGGTCGAGCCTACAAACCGGGGAACTAGATAAGACTCCCGAGGCTATATGGTACCGTGTGCACAC
AGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTAGAGACCGAGCTCCCGATGCCTGATACACTGCCAACGTCTTCTGAAAGTTCTAGAT
CAAGCTCCAGTTACTTTCCAAACCAGGTTATGTCAGGGCTGCACCATGTGTATGTTGAAAGGTTCAGCGTTTCAATAGGGTCAATAGGGATCGTTAGAGGTGACGATGTC
TGTTGGCTTCACGCCGTCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAGGGGGCGCAGATAATCTTTGCAGCAGTAGCTCCCTGTTTTCAGCTACAGTAGGTTCGTTTCT
CTTTTCTCTTCTTTGTGGCTTGCGTTTAAGCATTCCTCGCCCTCGATCTCTCACCCTTGGACCATTCTCCCTCTATTGCTATCGTTTTCCAGCATTCACCGGCAGGTCAG
TGGCTTGTAGGCAGAAGTTTCGGTGGTTGTGCAGCGTAGTCACGCGACAGCAAGCTTTCGGGTTGTCTCTTCATCGTTTTCAGCGTGAGATCAGTGTGGGTTTTCGTGGC
ATTCGAGATTGTATTTGTCGTGTTGGAGTAGAATTTGAGGGCTTGGACAACAAGCTTAGTTTCTGTTTATGCACGCTAGCGTGTGCACTCTCAGTTCAGGACGAGGTTGA
GCTTATGATTAGGCACGTTGTACATGCGCCAGGTGGCACCAGGCATGTTTACATGCGTCAGTGGTACTTGAGGGCGTTGGCGTTTGGCGAGGGTCGTTGCTTGACTGGCT
ATGGGATTGCAGCTGTAACGACCCCACTTTCCATCCTGGGATCCCAGTTAAAACAGAACAAAAGATTGCAATGCAAGTTCAAAAGAAGAATTTCGAAACATAAAATGCGG
AAGACTATCCTAAGGAAATCCATGGCTCAGCGGCACTCCGTCACGCGTTCTGTACACCTTTACCTCTACCTGCATAAGTTACTTACATCGAGTGACAGCGGTAATCAGAT
TCGAGCGACGAAGAAACAAACAGATCTGGACGCAGCGGCGGCGGCTTGCGCGACTTGCTGGTTGAACGTGGGGCGGCAGCAGCGTGAGGCTGTTATCGACGGCGTGCGAC
GGACCGACGGCAACGACACTCGCTTACGTCGTAAGCATCAGAATTCCCATAGCCAAGTACAAGTAAGCACGCCTCGTCATCGCCAGACTATGCCTCCACGTATTCAAGGT
CGAGGATGGGGTCGTGGACGTGGTAGGGGTCATGTACCTCTAGCGCAAGTGGTTCCTCCAGTGGGTCACCAGGCTAACAATGGACCCGAGATTCAGATGCCTGCACCGCC
TGCACACCCAACGCAGGCACAGATAGATTGTATTTGTCGTGTTGGAGCAGAATTTGAGGGCCTGGACAACAAGCCTAGTTTCTGTTTATGA
Protein sequenceShow/hide protein sequence
MGWESRFHFFRPRGNRSSLQTGELDKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVETELPMPDTLPTSSESSRSSSSYFPNQVMSGLHHVYVERFSVSIGSIGIVRGDDV
CWLHAVFRAKLAGGPGGGADNLCSSSSLFSATVGSFLFSLLCGLRLSIPRPRSLTLGPFSLYCYRFPAFTGRSVACRQKFRWLCSVVTRQQAFGLSLHRFQREISVGFRG
IRDCICRVGVEFEGLDNKLSFCLCTLACALSVQDEVELMIRHVVHAPGGTRHVYMRQWYLRALAFGEGRCLTGYGIAAVTTPLSILGSQLKQNKRLQCKFKRRISKHKMR
KTILRKSMAQRHSVTRSVHLYLYLHKLLTSSDSGNQIRATKKQTDLDAAAAACATCWLNVGRQQREAVIDGVRRTDGNDTRLRRKHQNSHSQVQVSTPRHRQTMPPRIQG
RGWGRGRGRGHVPLAQVVPPVGHQANNGPEIQMPAPPAHPTQAQIDCICRVGAEFEGLDNKPSFCL