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Spg008355 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008355
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEukaryotic translation initiation factor 3 subunit I
Genome locationscaffold10:31346806..31351664
RNA-Seq ExpressionSpg008355
SyntenySpg008355
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]2.5e-1238.26Show/hide
Query:  DKVREFYAGLREES----MSMAVVRGKMWKESQTKVKTLVPSDLKPVPAVGLHFIKNRLMPTTHDSTISVERVMLLYSIMKGLKINIGSIIREEILSCGR
        D+  EF   + E      +    V G  W  S     T + S L P   V  HF+K+ L+PTTH  T+S +R++LL+S++ G  IN+G +I  EI +C  
Subjt:  DKVREFYAGLREES----MSMAVVRGKMWKESQTKVKTLVPSDLKPVPAVGLHFIKNRLMPTTHDSTISVERVMLLYSIMKGLKINIGSIIREEILSCGR

Query:  KRAGKLFFGSLITQL
        ++ G LFF SLIT+L
Subjt:  KRAGKLFFGSLITQL

PON50458.1 hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]1.3e-1339.32Show/hide
Query:  LRDKVREFYAGLREESMSMAV----VRGKMWKESQTKVKTLVPSDLKPVPAVGLHFIKNRLMPTTHDSTISVERVMLLYSIMKGLKINIGSIIREEILSC
        L D+  EF   + E  ++M +    + G  W  S   V T + S L P   +  HF+K+RL+PTTH   +S ERV+LLYS++ G  IN+G +I  EI +C
Subjt:  LRDKVREFYAGLREESMSMAV----VRGKMWKESQTKVKTLVPSDLKPVPAVGLHFIKNRLMPTTHDSTISVERVMLLYSIMKGLKINIGSIIREEILSC

Query:  GRKRAGKLFFGSLITQL
          +++G LFF SLI ++
Subjt:  GRKRAGKLFFGSLITQL

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]1.7e-1340Show/hide
Query:  DKVREFYAGLREESMSMAV----VRGKMWKESQTKVKTLVPSDLKPVPAVGLHFIKNRLMPTTHDSTISVERVMLLYSIMKGLKINIGSIIREEILSCGR
        D+  EF   + E  ++  +    + G  W  S     T + S L P   V  HF+K+RL+PTTH  T+S ERV+LLYS++ G  IN+G II  EI +   
Subjt:  DKVREFYAGLREESMSMAV----VRGKMWKESQTKVKTLVPSDLKPVPAVGLHFIKNRLMPTTHDSTISVERVMLLYSIMKGLKINIGSIIREEILSCGR

Query:  KRAGKLFFGSLITQL
        +++G LFF SLIT++
Subjt:  KRAGKLFFGSLITQL

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]1.5e-1242.27Show/hide
Query:  MSMAVVRGKMWKESQTKVKTLVPSDLKPVPAVGLHFIKNRLMPTTHDSTISVERVMLLYSIMKGLKINIGSIIREEILSCGRKRAGKLFFGSLITQL
        +    + G  W  S     T + S L P   V  HF+K+RL+PTTH  T+S E V LLYS++ G  IN+G +I  EI +C  +++G LFF SLIT +
Subjt:  MSMAVVRGKMWKESQTKVKTLVPSDLKPVPAVGLHFIKNRLMPTTHDSTISVERVMLLYSIMKGLKINIGSIIREEILSCGRKRAGKLFFGSLITQL

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]1.1e-1241.46Show/hide
Query:  LKQSRDIARLRDKVREF-YAGLREESMSMAVVRGKMWKESQTKVKTLVPSDLKPVPAVGLHFIKNRLMPTTHDSTISVERVMLLYSIMKGLKINIGSIIR
        L QS   A+L +  RE   AG+R ++ S  ++R            T   S+LKP   V ++FI+  L PTTHDS+ISVE+++LLY ++ G  IN+G ++ 
Subjt:  LKQSRDIARLRDKVREF-YAGLREESMSMAVVRGKMWKESQTKVKTLVPSDLKPVPAVGLHFIKNRLMPTTHDSTISVERVMLLYSIMKGLKINIGSIIR

Query:  EEILSCGRKRAGKLFFGSLITQL
        + IL C ++R GKLFF SLI +L
Subjt:  EEILSCGRKRAGKLFFGSLITQL

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.2e-1238.26Show/hide
Query:  DKVREFYAGLREES----MSMAVVRGKMWKESQTKVKTLVPSDLKPVPAVGLHFIKNRLMPTTHDSTISVERVMLLYSIMKGLKINIGSIIREEILSCGR
        D+  EF   + E      +    V G  W  S     T + S L P   V  HF+K+ L+PTTH  T+S +R++LL+S++ G  IN+G +I  EI +C  
Subjt:  DKVREFYAGLREES----MSMAVVRGKMWKESQTKVKTLVPSDLKPVPAVGLHFIKNRLMPTTHDSTISVERVMLLYSIMKGLKINIGSIIREEILSCGR

Query:  KRAGKLFFGSLITQL
        ++ G LFF SLIT+L
Subjt:  KRAGKLFFGSLITQL

A0A2P5BCG4 Uncharacterized protein (Fragment)1.6e-1237.39Show/hide
Query:  DKVREFYAGLREES----MSMAVVRGKMWKESQTKVKTLVPSDLKPVPAVGLHFIKNRLMPTTHDSTISVERVMLLYSIMKGLKINIGSIIREEILSCGR
        D+  EF   + ++     +      G  W  S     T + S L P   V  HF+K+RL+PTTH  T+S +R++LL+S++ G  IN+G +I  EI +C  
Subjt:  DKVREFYAGLREES----MSMAVVRGKMWKESQTKVKTLVPSDLKPVPAVGLHFIKNRLMPTTHDSTISVERVMLLYSIMKGLKINIGSIIREEILSCGR

Query:  KRAGKLFFGSLITQL
        ++ G LFF SLIT+L
Subjt:  KRAGKLFFGSLITQL

A0A2P5BNT0 Uncharacterized protein (Fragment)6.5e-1439.32Show/hide
Query:  LRDKVREFYAGLREESMSMAV----VRGKMWKESQTKVKTLVPSDLKPVPAVGLHFIKNRLMPTTHDSTISVERVMLLYSIMKGLKINIGSIIREEILSC
        L D+  EF   + E  ++M +    + G  W  S   V T + S L P   +  HF+K+RL+PTTH   +S ERV+LLYS++ G  IN+G +I  EI +C
Subjt:  LRDKVREFYAGLREESMSMAV----VRGKMWKESQTKVKTLVPSDLKPVPAVGLHFIKNRLMPTTHDSTISVERVMLLYSIMKGLKINIGSIIREEILSC

Query:  GRKRAGKLFFGSLITQL
          +++G LFF SLI ++
Subjt:  GRKRAGKLFFGSLITQL

A0A2P5CPE8 Uncharacterized protein8.5e-1440Show/hide
Query:  DKVREFYAGLREESMSMAV----VRGKMWKESQTKVKTLVPSDLKPVPAVGLHFIKNRLMPTTHDSTISVERVMLLYSIMKGLKINIGSIIREEILSCGR
        D+  EF   + E  ++  +    + G  W  S     T + S L P   V  HF+K+RL+PTTH  T+S ERV+LLYS++ G  IN+G II  EI +   
Subjt:  DKVREFYAGLREESMSMAV----VRGKMWKESQTKVKTLVPSDLKPVPAVGLHFIKNRLMPTTHDSTISVERVMLLYSIMKGLKINIGSIIREEILSCGR

Query:  KRAGKLFFGSLITQL
        +++G LFF SLIT++
Subjt:  KRAGKLFFGSLITQL

A0A2P5DAQ2 Uncharacterized protein7.2e-1342.27Show/hide
Query:  MSMAVVRGKMWKESQTKVKTLVPSDLKPVPAVGLHFIKNRLMPTTHDSTISVERVMLLYSIMKGLKINIGSIIREEILSCGRKRAGKLFFGSLITQL
        +    + G  W  S     T + S L P   V  HF+K+RL+PTTH  T+S E V LLYS++ G  IN+G +I  EI +C  +++G LFF SLIT +
Subjt:  MSMAVVRGKMWKESQTKVKTLVPSDLKPVPAVGLHFIKNRLMPTTHDSTISVERVMLLYSIMKGLKINIGSIIREEILSCGRKRAGKLFFGSLITQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATCAGAATTTTAATCCTAATGCATTTTTTGATGACCCTCTGTTTGAAAATGAGCTAGAAATGCCTGCTTTTGAGAATGAATTAGAATTACTTGATTTTGAGAA
TGAAATAGATTTGCCTGATTTTGAGAATGAGCTTGAAATGCTTGTGTTAGACGATTTGCATGCTTTAAATGGAGAGGATTACTTGATAGATGAAAATTTTGAGTCTGATC
ATGATAATGCTGAATCTATCGAGTCTGATCCTGACATGGCTGAAAGTATAGAGTCGGTCCCTGAAATTGTTGATAGTTTTAATTCGGGTCTCGATAGTGTGGATAGTAGT
ATAGAATCTGACCCCGATGAGATTGAATTCTTTGATTCTTTTGATGACGAGTCACATGATAGCTTGGTTGAGTCATTTTTTAATACTGAGTCTCCGGAATCTTCTGAACA
TATAGATATTGCATCTGATGAATGGATAGGCATAGTTGATAGGCCATCCTTAAATCCTAGACCGGTAGATATCATGACACTGGATGACTCTGTTAATAACTGTTTTGAAA
ATAGAGACTTAGAAAAGAGATTTGATGAAGGCCAAGAAAAGGTCATTGAAGAGCAGCAAGCTGATGAGGCCCTCGATCCTTTGTTCGAGTATGATATTAGGGGACCTCCA
CCAACTGCTGAAAGCACATCTTCGGGAGAGAAAAAGGATGAAGAGGAAATTGAAGAAAAAAAGGTCGAGACCTCTAGTGATAGTGAGACAGAGTCAGATTCTGAAATCAA
GGAATTGGACGATGACCAAATTCCTATTTTTGCAGCTTTGAGGAAGAAAAGAAGAAGAGAATTGAGAGCCGAGAGGACGACAAAGAATAAAAATGACCCCATTTTTTCCA
ATAGGCCGAGGACAAGAGAAGGTGAAGATTATGAGAAAAAGGGACTTCTTGAACGAGGAGGGATTCTCAAACAGAGCAGGGACATTGCCAGACTTCGTGACAAAGTTCGA
GAGTTCTATGCTGGATTGAGGGAGGAGAGCATGAGCATGGCGGTGGTGAGAGGAAAAATGTGGAAGGAGTCTCAGACCAAAGTGAAGACACTAGTGCCAAGTGATCTTAA
GCCAGTACCGGCAGTGGGGCTTCACTTCATCAAAAACAGACTGATGCCCACAACCCACGACAGTACAATTTCAGTAGAGAGGGTTATGCTTCTCTACAGCATCATGAAGG
GGTTGAAGATCAATATAGGGAGCATCATCAGAGAGGAGATCCTTTCATGTGGAAGGAAGAGAGCTGGGAAATTGTTCTTTGGGTCCCTCATAACCCAACTTTGGCCTACA
CCATCATTAGAGACCCTAGCATTTTCCTTCCGACAGTTTGATAGGATTGAAGACAAGCTGAAAACATATTGGGTCTACGCGAAGGAAAGAGATGAAGCAATTAGAGAGTT
TTATCTCTCTATCGCCCAAGCATTGCTCCTGTTTTCCTTGACTTCCCTCAAGCCTTGCTGCCTCAAGAAGAAGAAGAATCCGAAGATGAAGATGAAGAGAATTTCTCAGA
TGAGGAATAGGGGAGTTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGATCAGAATTTTAATCCTAATGCATTTTTTGATGACCCTCTGTTTGAAAATGAGCTAGAAATGCCTGCTTTTGAGAATGAATTAGAATTACTTGATTTTGAGAA
TGAAATAGATTTGCCTGATTTTGAGAATGAGCTTGAAATGCTTGTGTTAGACGATTTGCATGCTTTAAATGGAGAGGATTACTTGATAGATGAAAATTTTGAGTCTGATC
ATGATAATGCTGAATCTATCGAGTCTGATCCTGACATGGCTGAAAGTATAGAGTCGGTCCCTGAAATTGTTGATAGTTTTAATTCGGGTCTCGATAGTGTGGATAGTAGT
ATAGAATCTGACCCCGATGAGATTGAATTCTTTGATTCTTTTGATGACGAGTCACATGATAGCTTGGTTGAGTCATTTTTTAATACTGAGTCTCCGGAATCTTCTGAACA
TATAGATATTGCATCTGATGAATGGATAGGCATAGTTGATAGGCCATCCTTAAATCCTAGACCGGTAGATATCATGACACTGGATGACTCTGTTAATAACTGTTTTGAAA
ATAGAGACTTAGAAAAGAGATTTGATGAAGGCCAAGAAAAGGTCATTGAAGAGCAGCAAGCTGATGAGGCCCTCGATCCTTTGTTCGAGTATGATATTAGGGGACCTCCA
CCAACTGCTGAAAGCACATCTTCGGGAGAGAAAAAGGATGAAGAGGAAATTGAAGAAAAAAAGGTCGAGACCTCTAGTGATAGTGAGACAGAGTCAGATTCTGAAATCAA
GGAATTGGACGATGACCAAATTCCTATTTTTGCAGCTTTGAGGAAGAAAAGAAGAAGAGAATTGAGAGCCGAGAGGACGACAAAGAATAAAAATGACCCCATTTTTTCCA
ATAGGCCGAGGACAAGAGAAGGTGAAGATTATGAGAAAAAGGGACTTCTTGAACGAGGAGGGATTCTCAAACAGAGCAGGGACATTGCCAGACTTCGTGACAAAGTTCGA
GAGTTCTATGCTGGATTGAGGGAGGAGAGCATGAGCATGGCGGTGGTGAGAGGAAAAATGTGGAAGGAGTCTCAGACCAAAGTGAAGACACTAGTGCCAAGTGATCTTAA
GCCAGTACCGGCAGTGGGGCTTCACTTCATCAAAAACAGACTGATGCCCACAACCCACGACAGTACAATTTCAGTAGAGAGGGTTATGCTTCTCTACAGCATCATGAAGG
GGTTGAAGATCAATATAGGGAGCATCATCAGAGAGGAGATCCTTTCATGTGGAAGGAAGAGAGCTGGGAAATTGTTCTTTGGGTCCCTCATAACCCAACTTTGGCCTACA
CCATCATTAGAGACCCTAGCATTTTCCTTCCGACAGTTTGATAGGATTGAAGACAAGCTGAAAACATATTGGGTCTACGCGAAGGAAAGAGATGAAGCAATTAGAGAGTT
TTATCTCTCTATCGCCCAAGCATTGCTCCTGTTTTCCTTGACTTCCCTCAAGCCTTGCTGCCTCAAGAAGAAGAAGAATCCGAAGATGAAGATGAAGAGAATTTCTCAGA
TGAGGAATAGGGGAGTTTTCTAA
Protein sequenceShow/hide protein sequence
MDDQNFNPNAFFDDPLFENELEMPAFENELELLDFENEIDLPDFENELEMLVLDDLHALNGEDYLIDENFESDHDNAESIESDPDMAESIESVPEIVDSFNSGLDSVDSS
IESDPDEIEFFDSFDDESHDSLVESFFNTESPESSEHIDIASDEWIGIVDRPSLNPRPVDIMTLDDSVNNCFENRDLEKRFDEGQEKVIEEQQADEALDPLFEYDIRGPP
PTAESTSSGEKKDEEEIEEKKVETSSDSETESDSEIKELDDDQIPIFAALRKKRRRELRAERTTKNKNDPIFSNRPRTREGEDYEKKGLLERGGILKQSRDIARLRDKVR
EFYAGLREESMSMAVVRGKMWKESQTKVKTLVPSDLKPVPAVGLHFIKNRLMPTTHDSTISVERVMLLYSIMKGLKINIGSIIREEILSCGRKRAGKLFFGSLITQLWPT
PSLETLAFSFRQFDRIEDKLKTYWVYAKERDEAIREFYLSIAQALLLFSLTSLKPCCLKKKKNPKMKMKRISQMRNRGVF