; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg008362 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008362
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRicin B-type lectin domain-containing protein
Genome locationscaffold10:34176446..34177015
RNA-Seq ExpressionSpg008362
SyntenySpg008362
Gene Ontology termsNA
InterPro domainsIPR021410 - The fantastic four family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579017.1 hypothetical protein SDJN03_23465, partial [Cucurbita argyrosperma subsp. sororia]5.9e-5263.73Show/hide
Query:  QSEKVSP-GPRDFDIINDYIGMESCVDSKDEQTAADMSPPTSF-TNGNSKRDYR---MWGKDQREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILT
        +S KVS   P D +  +DYIG+ESCVD KD  TAAD++P  SF   GNSKRD +   M  KDQ+ YPPPIPLLVRTENL SH+PWV+KR YTGDGRLILT
Subjt:  QSEKVSP-GPRDFDIINDYIGMESCVDSKDEQTAADMSPPTSF-TNGNSKRDYR---MWGKDQREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILT

Query:  EEKVRRHEFFRAHRSDGRLMLQLVAVDDQVSDE-SNVEMGEEECPAAEGDESEGGRMVGVGRGEFYTYENVRDRDPAFMFGVAVPAGSLRTVR
        EEKV+ HEFFRAHRSDGRLMLQLV +DDQ  DE  + E  +E+C  A G E EGG+        +  YENVRDRD AFMFGV V AGSLR+VR
Subjt:  EEKVRRHEFFRAHRSDGRLMLQLVAVDDQVSDE-SNVEMGEEECPAAEGDESEGGRMVGVGRGEFYTYENVRDRDPAFMFGVAVPAGSLRTVR

KAG7016540.1 hypothetical protein SDJN02_21649 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-5267.23Show/hide
Query:  NDYIGMESCVDSKDEQTAADMSPPTSF-TNGNSKRDYR---MWGKDQREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVRRHEFFRAHRSD
        +DYIG+ESCVD KD  TAAD+SP  SF   GNSKRD +   M  KDQ+ YPPPIPLLVRTENL SH+PWV+KR YTGDGRLILTEEKV+ HEFFRAHRSD
Subjt:  NDYIGMESCVDSKDEQTAADMSPPTSF-TNGNSKRDYR---MWGKDQREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVRRHEFFRAHRSD

Query:  GRLMLQLVAVDDQVSDE-SNVEMGEEECPAAEGDESEGGRMVGVGRGEFYTYENVRDRDPAFMFGVAVPAGSLRTVR
        GRLMLQLV +DDQ  DE  + E  +EEC  A G E EGG+        +  YENVRDRD AFMFGV V AGSLR+VR
Subjt:  GRLMLQLVAVDDQVSDE-SNVEMGEEECPAAEGDESEGGRMVGVGRGEFYTYENVRDRDPAFMFGVAVPAGSLRTVR

XP_022939970.1 uncharacterized protein LOC111445672 [Cucurbita moschata]1.5e-5264.25Show/hide
Query:  QSEKVSP-GPRDFDIINDYIGMESCVDSKDEQTAADMSPPTSF-TNGNSKRDYR---MWGKDQREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILT
        +S KVS   P D +  +DYIG+ESCVD KD  TAAD++P  SF   GNSKRD +   M  KDQ+ YPPPIPLLVRTENL SH+PWV+KR YTGDGRLILT
Subjt:  QSEKVSP-GPRDFDIINDYIGMESCVDSKDEQTAADMSPPTSF-TNGNSKRDYR---MWGKDQREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILT

Query:  EEKVRRHEFFRAHRSDGRLMLQLVAVDDQVSDE-SNVEMGEEECPAAEGDESEGGRMVGVGRGEFYTYENVRDRDPAFMFGVAVPAGSLRTVR
        EEKV+ HEFFRAHRSDGRLMLQLV +DDQ  DE  + E  +EEC  A G E EGG+        +  YENVRDRD AFMFGV V AGSLR+VR
Subjt:  EEKVRRHEFFRAHRSDGRLMLQLVAVDDQVSDE-SNVEMGEEECPAAEGDESEGGRMVGVGRGEFYTYENVRDRDPAFMFGVAVPAGSLRTVR

XP_022992861.1 uncharacterized protein LOC111489066 [Cucurbita maxima]7.7e-5262.24Show/hide
Query:  QSEKVSP-GPRDFDIINDYIGMESCVDSKDEQTAADMSPPTSF-TNGNSKRDYR---MWGKDQREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILT
        +S KVS   P D +  +DYIG+ESCVD K   TAAD++P  SF   GNSKRD +   M  K+Q+ YPPPIPLLVRTENLASH+PWV+KR YTGDGRLILT
Subjt:  QSEKVSP-GPRDFDIINDYIGMESCVDSKDEQTAADMSPPTSF-TNGNSKRDYR---MWGKDQREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILT

Query:  EEKVRRHEFFRAHRSDGRLMLQLVAVDDQ----VSDESNVEMGEEECPAAEGDESEGGRMVGVGRGEFYTYENVRDRDPAFMFGVAVPAGSLRTVR
        EEKV+ HEFFRAHRSDGRLMLQLV +DDQ      DE   E  EEEC  A G E           G++  YENVRDRD AFMFGV V AGSLR+VR
Subjt:  EEKVRRHEFFRAHRSDGRLMLQLVAVDDQ----VSDESNVEMGEEECPAAEGDESEGGRMVGVGRGEFYTYENVRDRDPAFMFGVAVPAGSLRTVR

XP_023551237.1 uncharacterized protein LOC111809117 [Cucurbita pepo subsp. pepo]1.2e-5263.54Show/hide
Query:  QSEKVSP-GPRDFDIINDYIGMESCVDSKDEQTAADMSPPTSF-TNGNSKRDYR---MWGKDQREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILT
        +S KVS   P D +  +DYIG+ESCVD KD  TA D +P  SF   GNSKRD +   M  KDQ+ YPPPIPLLVRTENLASH+PWV+KR YTGDGRLILT
Subjt:  QSEKVSP-GPRDFDIINDYIGMESCVDSKDEQTAADMSPPTSF-TNGNSKRDYR---MWGKDQREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILT

Query:  EEKVRRHEFFRAHRSDGRLMLQLVAVDDQVSDESNVEMGEEECPAAEGDESEGGRMVGVGRGEFYTYENVRDRDPAFMFGVAVPAGSLRTVR
        EEKV+ HEFFRAHRSDGRLMLQLV +DDQ  DE + E  EEE   A G E           G++  YENVRDRD AFMFGV V AGSLR+VR
Subjt:  EEKVRRHEFFRAHRSDGRLMLQLVAVDDQVSDESNVEMGEEECPAAEGDESEGGRMVGVGRGEFYTYENVRDRDPAFMFGVAVPAGSLRTVR

TrEMBL top hitse value%identityAlignment
A0A6J1CJ12 uncharacterized protein LOC1110118043.1e-5160.31Show/hide
Query:  QSEKVSPGPRDFDIINDYIGMESCVDSKDEQTAADMSPPTSFTNGNSKRDYRMW---GKDQREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEE
        QS++V P       I+DYIGMESCVD K+ QTAAD  PP      + KR+ +MW   G+ +REYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEE
Subjt:  QSEKVSPGPRDFDIINDYIGMESCVDSKDEQTAADMSPPTSFTNGNSKRDYRMW---GKDQREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEE

Query:  KVRRHEFFRAHRSDGRLMLQLVAVDDQVSDESNVEMGEEECPAAEGDESEGGRMVGVGRGEFYTYENVRDRDPAFMFGVAVP---AGSLRTVRS
        KVR HE+FRAHRSDGRLMLQLVA+DD   +    +  E+E      D  +GG+M  +  G        R RDPA MFGVAVP   AG+LRTVRS
Subjt:  KVRRHEFFRAHRSDGRLMLQLVAVDDQVSDESNVEMGEEECPAAEGDESEGGRMVGVGRGEFYTYENVRDRDPAFMFGVAVP---AGSLRTVRS

A0A6J1FP95 uncharacterized protein LOC1114456727.5e-5364.25Show/hide
Query:  QSEKVSP-GPRDFDIINDYIGMESCVDSKDEQTAADMSPPTSF-TNGNSKRDYR---MWGKDQREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILT
        +S KVS   P D +  +DYIG+ESCVD KD  TAAD++P  SF   GNSKRD +   M  KDQ+ YPPPIPLLVRTENL SH+PWV+KR YTGDGRLILT
Subjt:  QSEKVSP-GPRDFDIINDYIGMESCVDSKDEQTAADMSPPTSF-TNGNSKRDYR---MWGKDQREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILT

Query:  EEKVRRHEFFRAHRSDGRLMLQLVAVDDQVSDE-SNVEMGEEECPAAEGDESEGGRMVGVGRGEFYTYENVRDRDPAFMFGVAVPAGSLRTVR
        EEKV+ HEFFRAHRSDGRLMLQLV +DDQ  DE  + E  +EEC  A G E EGG+        +  YENVRDRD AFMFGV V AGSLR+VR
Subjt:  EEKVRRHEFFRAHRSDGRLMLQLVAVDDQVSDE-SNVEMGEEECPAAEGDESEGGRMVGVGRGEFYTYENVRDRDPAFMFGVAVPAGSLRTVR

A0A6J1GVY4 uncharacterized protein LOC1114580311.8e-4355.21Show/hide
Query:  MQSEKVSPGPRDFDIINDYIGMESCVDSKDEQTAADMSPPTSFTNGNSKRDYRMWG---KDQREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTE
        MQS+ +SP  RDFD  +DYIG+ESCVD  +  T++D+S        N +RD +MWG   KD  EYPPPI LLVRTENLAS MPWVLKRHYT DGRLILTE
Subjt:  MQSEKVSPGPRDFDIINDYIGMESCVDSKDEQTAADMSPPTSFTNGNSKRDYRMWG---KDQREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTE

Query:  EKVRRHEFFRAHRSDGRLMLQLVAVDDQVSDESNVEMGEEECPAAEGDESEGGRMVGVGRGEFYTYENVRDRDPAFMFGVAVPAGSLRTVRS
        E++R +EFFRAHRS+GRLMLQLVA DDQ  DESNVE+G E     +G + E       GR          +       G   P G+LRTVRS
Subjt:  EKVRRHEFFRAHRSDGRLMLQLVAVDDQVSDESNVEMGEEECPAAEGDESEGGRMVGVGRGEFYTYENVRDRDPAFMFGVAVPAGSLRTVRS

A0A6J1JTI2 uncharacterized protein LOC1114873721.2e-4264.97Show/hide
Query:  MQSEKVSPGPRDFDIINDYIGMESCVDSKDEQTAADMSPPTSFTNGNSKRDYRMWG---KDQREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTE
        MQS+ +SP  RDFD I+DYIGMESCVD ++  TAAD+S        N KRD +M G   KD  EYPPPI LLVRTENLAS MPWVLKR YT DGRLILT+
Subjt:  MQSEKVSPGPRDFDIINDYIGMESCVDSKDEQTAADMSPPTSFTNGNSKRDYRMWG---KDQREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTE

Query:  EKVRRHEFFRAHRSDGRLMLQLVAVDDQVSDESNVEMGE------EEC-PAAEGDES
        E++R +EFFRAHRSDGRLMLQLVA DDQ  DESNVE+G+      EEC  AAEG ++
Subjt:  EKVRRHEFFRAHRSDGRLMLQLVAVDDQVSDESNVEMGE------EEC-PAAEGDES

A0A6J1JUP6 uncharacterized protein LOC1114890663.7e-5262.24Show/hide
Query:  QSEKVSP-GPRDFDIINDYIGMESCVDSKDEQTAADMSPPTSF-TNGNSKRDYR---MWGKDQREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILT
        +S KVS   P D +  +DYIG+ESCVD K   TAAD++P  SF   GNSKRD +   M  K+Q+ YPPPIPLLVRTENLASH+PWV+KR YTGDGRLILT
Subjt:  QSEKVSP-GPRDFDIINDYIGMESCVDSKDEQTAADMSPPTSF-TNGNSKRDYR---MWGKDQREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILT

Query:  EEKVRRHEFFRAHRSDGRLMLQLVAVDDQ----VSDESNVEMGEEECPAAEGDESEGGRMVGVGRGEFYTYENVRDRDPAFMFGVAVPAGSLRTVR
        EEKV+ HEFFRAHRSDGRLMLQLV +DDQ      DE   E  EEEC  A G E           G++  YENVRDRD AFMFGV V AGSLR+VR
Subjt:  EEKVRRHEFFRAHRSDGRLMLQLVAVDDQ----VSDESNVEMGEEECPAAEGDESEGGRMVGVGRGEFYTYENVRDRDPAFMFGVAVPAGSLRTVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G22110.1 structural constituent of ribosome1.6e-2648.2Show/hide
Query:  INDYIGMESCVD------SKDEQTAADMSPPTSFTNGNSKRDYR-MWGKDQREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVRRHEFFRA
        + DYIG ESC D        D  + A     + F  G  +R+ R       RE+PPPIPLL +T NL  HMPWVLKR  T DGRLIL EEKVR HE+FRA
Subjt:  INDYIGMESCVD------SKDEQTAADMSPPTSFTNGNSKRDYR-MWGKDQREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVRRHEFFRA

Query:  HRSDGRLMLQLVAVDDQVSD--------ESNVEMGEEEC
        +RS+GRL L LV +DD V D        +S+ E  ++EC
Subjt:  HRSDGRLMLQLVAVDDQVSD--------ESNVEMGEEEC

AT1G77932.1 Protein of unknown function (DUF3049)2.5e-1642.61Show/hide
Query:  YIGMESCVDSKDEQTAADMSPPTSFTNGNSKRDYRMWGKDQREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVRRHEFFRAHRSDGRLMLQ
        YIG ESC ++  ++T  D+  P        +R+ +     +   PP +P         SH+P VLKR YT DGRL+L EEKV R+E+FRAHRS+GRLM+Q
Subjt:  YIGMESCVDSKDEQTAADMSPPTSFTNGNSKRDYRMWGKDQREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVRRHEFFRAHRSDGRLMLQ

Query:  LVAVDDQVSDESNVE
        LV++D+    +S+V+
Subjt:  LVAVDDQVSDESNVE

AT5G22390.1 Protein of unknown function (DUF3049)2.8e-0727.74Show/hide
Query:  EKVSPGPRDFDIINDYIGMESCVDSKDEQTAAD-------MSPPTSFTNGNSKRDYRMWGKDQREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILT
        EK S       +  + +G ES    +DE+   D       +         N + ++    K+++EYPP              M  +  + Y  +GRL+L 
Subjt:  EKVSPGPRDFDIINDYIGMESCVDSKDEQTAAD-------MSPPTSFTNGNSKRDYRMWGKDQREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILT

Query:  EEKVRRHEFFRAHRSDGRLMLQLVAVDDQVSDESNVE
        E ++ R EF RA R DGRL L+LV  +D   +E   E
Subjt:  EEKVRRHEFFRAHRSDGRLMLQLVAVDDQVSDESNVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAGCGAGAAGGTTTCCCCTGGTCCTAGAGATTTCGACATTATTAACGATTACATTGGAATGGAGAGTTGTGTCGATTCGAAGGACGAGCAGACGGCGGCCGACAT
GTCGCCGCCGACGAGTTTCACCAATGGAAATAGTAAGAGGGATTACAGAATGTGGGGAAAAGATCAGAGAGAGTATCCTCCGCCGATTCCTTTGCTGGTTCGGACCGAGA
ATCTGGCTTCCCACATGCCATGGGTGTTGAAACGGCACTACACCGGCGACGGGCGGCTGATTCTGACGGAGGAGAAAGTGAGGCGCCATGAGTTCTTCCGTGCCCACAGA
TCCGATGGCCGGCTGATGCTGCAGCTGGTGGCCGTGGACGACCAGGTCTCCGATGAGTCGAATGTGGAAATGGGGGAGGAGGAGTGTCCGGCGGCGGAGGGCGATGAGAG
TGAGGGCGGCAGAATGGTCGGCGTCGGCAGGGGGGAGTTTTATACGTATGAGAATGTGAGGGACAGAGATCCAGCGTTTATGTTCGGAGTTGCAGTGCCTGCAGGGAGCC
TGAGGACCGTTCGAAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGAGCGAGAAGGTTTCCCCTGGTCCTAGAGATTTCGACATTATTAACGATTACATTGGAATGGAGAGTTGTGTCGATTCGAAGGACGAGCAGACGGCGGCCGACAT
GTCGCCGCCGACGAGTTTCACCAATGGAAATAGTAAGAGGGATTACAGAATGTGGGGAAAAGATCAGAGAGAGTATCCTCCGCCGATTCCTTTGCTGGTTCGGACCGAGA
ATCTGGCTTCCCACATGCCATGGGTGTTGAAACGGCACTACACCGGCGACGGGCGGCTGATTCTGACGGAGGAGAAAGTGAGGCGCCATGAGTTCTTCCGTGCCCACAGA
TCCGATGGCCGGCTGATGCTGCAGCTGGTGGCCGTGGACGACCAGGTCTCCGATGAGTCGAATGTGGAAATGGGGGAGGAGGAGTGTCCGGCGGCGGAGGGCGATGAGAG
TGAGGGCGGCAGAATGGTCGGCGTCGGCAGGGGGGAGTTTTATACGTATGAGAATGTGAGGGACAGAGATCCAGCGTTTATGTTCGGAGTTGCAGTGCCTGCAGGGAGCC
TGAGGACCGTTCGAAGCTAA
Protein sequenceShow/hide protein sequence
MQSEKVSPGPRDFDIINDYIGMESCVDSKDEQTAADMSPPTSFTNGNSKRDYRMWGKDQREYPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVRRHEFFRAHR
SDGRLMLQLVAVDDQVSDESNVEMGEEECPAAEGDESEGGRMVGVGRGEFYTYENVRDRDPAFMFGVAVPAGSLRTVRS