; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg008378 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008378
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Genome locationscaffold10:34112975..34116134
RNA-Seq ExpressionSpg008378
SyntenySpg008378
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]3.3e-2047.52Show/hide
Query:  KRCSSSDRDSRKDKRQRTDEGDRGRPDHGRGRLDQAHPFGKFEKYTPTVVPQKQVLMKIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQL
        KR S+  R  +  KR+R+ +  +G     R R  Q  P  KFEKYT T VP +QVLM+I+N  LLK+P RM +S  +R K +YCLFH DHGH+T++C  L
Subjt:  KRCSSSDRDSRKDKRQRTDEGDRGRPDHGRGRLDQAHPFGKFEKYTPTVVPQKQVLMKIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQL

Query:  KDEIEALIQNGYQKEFVGEPKT----EADQRWPRQRRTPTG
        K+E+E LI  GY KE+V EPK     E+D+   R+ RT  G
Subjt:  KDEIEALIQNGYQKEFVGEPKT----EADQRWPRQRRTPTG

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]7.8e-2244.12Show/hide
Query:  NTLKELGNPQGDLQTAKELLKSKKSEREHKRCSSSDRDSRKDKRQRTDEGDRGRPDHGRGRLDQAHPFGKFEKYTPTVVPQKQVLMKIRNTGLLKFPGRM
        NT  E  +      +A E   SK+ E + KR           KR+R+ +  +G     R R  Q  P  KFEKYTPT VP +QVLM+I++  LLK+P RM
Subjt:  NTLKELGNPQGDLQTAKELLKSKKSEREHKRCSSSDRDSRKDKRQRTDEGDRGRPDHGRGRLDQAHPFGKFEKYTPTVVPQKQVLMKIRNTGLLKFPGRM

Query:  KSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYQKEFVGEPKT----EADQRWPRQRRTPTG
        K+S  +R K +YCLFHRDHGH+T++C  LK+E+E LI+ GY KE+V EPK     E+D+   R+ RT  G
Subjt:  KSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYQKEFVGEPKT----EADQRWPRQRRTPTG

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]4.0e-1841.94Show/hide
Query:  KELLKSKKSEREHKRCSSSDRDSRKDKRQRTDEGDRGRPDHGRGRLDQAHPFGKFEKYTPTVVPQKQVLMKIRNTGLLKFPGRMKSSPDRRDKSQYCLFH
        K+ L+ K+++++ +R       S+ +K+ R      G+ D  R          KFEKYTPT VP +QVLM+I++  LLK+P  MK+ P++R K +YCLFH
Subjt:  KELLKSKKSEREHKRCSSSDRDSRKDKRQRTDEGDRGRPDHGRGRLDQAHPFGKFEKYTPTVVPQKQVLMKIRNTGLLKFPGRMKSSPDRRDKSQYCLFH

Query:  RDHGHSTRNCIQLKDEIEALIQNGYQKEFVGE----PKTEADQRWP-RQRRTPTG
        RDHGH+T +C  LK+E+E LI+ GY KE+V +    P  E D + P R+ RT  G
Subjt:  RDHGHSTRNCIQLKDEIEALIQNGYQKEFVGE----PKTEADQRWP-RQRRTPTG

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]1.2e-1946.88Show/hide
Query:  KRQRTDEGDRGRPDHGRGRLDQAHPFGKFEKYTPTVVPQKQVLMKIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYQ
        KR+R+ +  +G     R R  Q  P  KFEKYTPT VP +QVLM+I++  LLK+P RMK    +R K +YCLFHRDH H+T++   LK+E+E LI+ GY 
Subjt:  KRQRTDEGDRGRPDHGRGRLDQAHPFGKFEKYTPTVVPQKQVLMKIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYQ

Query:  KEFVGEPKT----EADQRWPRQRRTPTG
        +E+V EPK     E+++   R+ RT  G
Subjt:  KEFVGEPKT----EADQRWPRQRRTPTG

XP_030929562.1 uncharacterized protein LOC115955545 [Quercus lobata]1.4e-1844.76Show/hide
Query:  PFGKFEKYTPTVVPQKQVLMKIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYQKEFVGEPKTEADQRWPRQRRTPTG
        P GKF  +TP   P  QVLM+I++ G L+FPG+++  P++R K +YC FHRDHGH T NC  LK +IEALI+ G  + F+ + + +     P Q   P  
Subjt:  PFGKFEKYTPTVVPQKQVLMKIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYQKEFVGEPKTEADQRWPRQRRTPTG

Query:  DQNHL
        D  HL
Subjt:  DQNHL

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128051.6e-2047.52Show/hide
Query:  KRCSSSDRDSRKDKRQRTDEGDRGRPDHGRGRLDQAHPFGKFEKYTPTVVPQKQVLMKIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQL
        KR S+  R  +  KR+R+ +  +G     R R  Q  P  KFEKYT T VP +QVLM+I+N  LLK+P RM +S  +R K +YCLFH DHGH+T++C  L
Subjt:  KRCSSSDRDSRKDKRQRTDEGDRGRPDHGRGRLDQAHPFGKFEKYTPTVVPQKQVLMKIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQL

Query:  KDEIEALIQNGYQKEFVGEPKT----EADQRWPRQRRTPTG
        K+E+E LI  GY KE+V EPK     E+D+   R+ RT  G
Subjt:  KDEIEALIQNGYQKEFVGEPKT----EADQRWPRQRRTPTG

A0A6J1D4A4 uncharacterized protein LOC1110174706.9e-1633.51Show/hide
Query:  EVEARLAEAEAKKDNPPWKTELLNTLKELGNPQGDLQTAKELLKSKKSEREHKRCSSSDRDSRKDKRQRTDEGDRGRPDHGRGRLDQAHPFGKFEKYTPT
        E  A  AE   K        ELL T  + G P+  +   K   + KK++ +++   SS   SR + R+      R RP               +E+YTPT
Subjt:  EVEARLAEAEAKKDNPPWKTELLNTLKELGNPQGDLQTAKELLKSKKSEREHKRCSSSDRDSRKDKRQRTDEGDRGRPDHGRGRLDQAHPFGKFEKYTPT

Query:  VVPQKQVLMKIRNTG---LLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYQKEFVGEPKTEADQRWPRQRRTPT
         +P  ++L  I  +G   LLK P +++  P++R+K +YC FHRDH H+T +C +LK +IE LIQ+GY K+FVG+P++ + ++  +++R+ T
Subjt:  VVPQKQVLMKIRNTG---LLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYQKEFVGEPKTEADQRWPRQRRTPT

A0A6J1DWY0 uncharacterized protein LOC1110252933.8e-2244.12Show/hide
Query:  NTLKELGNPQGDLQTAKELLKSKKSEREHKRCSSSDRDSRKDKRQRTDEGDRGRPDHGRGRLDQAHPFGKFEKYTPTVVPQKQVLMKIRNTGLLKFPGRM
        NT  E  +      +A E   SK+ E + KR           KR+R+ +  +G     R R  Q  P  KFEKYTPT VP +QVLM+I++  LLK+P RM
Subjt:  NTLKELGNPQGDLQTAKELLKSKKSEREHKRCSSSDRDSRKDKRQRTDEGDRGRPDHGRGRLDQAHPFGKFEKYTPTVVPQKQVLMKIRNTGLLKFPGRM

Query:  KSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYQKEFVGEPKT----EADQRWPRQRRTPTG
        K+S  +R K +YCLFHRDHGH+T++C  LK+E+E LI+ GY KE+V EPK     E+D+   R+ RT  G
Subjt:  KSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYQKEFVGEPKT----EADQRWPRQRRTPTG

A0A6J1DYL6 uncharacterized protein LOC1110257856.0e-2046.88Show/hide
Query:  KRQRTDEGDRGRPDHGRGRLDQAHPFGKFEKYTPTVVPQKQVLMKIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYQ
        KR+R+ +  +G     R R  Q  P  KFEKYTPT VP +QVLM+I++  LLK+P RMK    +R K +YCLFHRDH H+T++   LK+E+E LI+ GY 
Subjt:  KRQRTDEGDRGRPDHGRGRLDQAHPFGKFEKYTPTVVPQKQVLMKIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYQ

Query:  KEFVGEPKT----EADQRWPRQRRTPTG
        +E+V EPK     E+++   R+ RT  G
Subjt:  KEFVGEPKT----EADQRWPRQRRTPTG

A0A6J1DZ52 uncharacterized protein LOC1110256121.9e-1841.94Show/hide
Query:  KELLKSKKSEREHKRCSSSDRDSRKDKRQRTDEGDRGRPDHGRGRLDQAHPFGKFEKYTPTVVPQKQVLMKIRNTGLLKFPGRMKSSPDRRDKSQYCLFH
        K+ L+ K+++++ +R       S+ +K+ R      G+ D  R          KFEKYTPT VP +QVLM+I++  LLK+P  MK+ P++R K +YCLFH
Subjt:  KELLKSKKSEREHKRCSSSDRDSRKDKRQRTDEGDRGRPDHGRGRLDQAHPFGKFEKYTPTVVPQKQVLMKIRNTGLLKFPGRMKSSPDRRDKSQYCLFH

Query:  RDHGHSTRNCIQLKDEIEALIQNGYQKEFVGE----PKTEADQRWP-RQRRTPTG
        RDHGH+T +C  LK+E+E LI+ GY KE+V +    P  E D + P R+ RT  G
Subjt:  RDHGHSTRNCIQLKDEIEALIQNGYQKEFVGE----PKTEADQRWP-RQRRTPTG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAAGGGGATGGAGAAGAGAAATCAAGACATAAACACAGAAAATTCGGATGGTGACCGCCACCAGCGGAGGTCACGGGAAGAAGGCCGAGATCGACCTCAGACCGA
ATCTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAGCTGATCTAAAATTTTCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCATAATTTGTCCAGGA
TACTTCGTATCTTGGATAAACCTGGTCCTAGCACTAAAACCCCTGATGAGAGGTTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCATGGAGCACACTACAGAATCGGAG
ACGAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGATCAGGGGGATCAAGCCTACTGATCGTACAATTTTGAGGAGCCCAGAGTCAAGCACACTTAGGAGACG
TGACTACACAGTTTCTACCCCAAGCTATGGTCATACTAAGACAGACCAGAGGAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTCCCGAATCCGAGGCCAGAGCTG
CCAAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAACCGAGGTCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAAGACAATCCCCCTTGGAAGACCGAGCTT
CTAAACACACTAAAGGAACTCGGAAATCCTCAGGGAGACCTGCAGACCGCAAAAGAGTTGCTCAAGTCGAAGAAGTCAGAACGTGAACACAAGAGGTGTTCTTCATCTGA
CCGCGACAGTAGGAAGGACAAAAGGCAGCGGACCGACGAGGGAGACCGAGGCCGACCAGACCATGGCCGAGGCCGACTAGACCAAGCACATCCCTTTGGTAAGTTCGAGA
AATATACACCGACAGTTGTTCCACAGAAGCAAGTACTGATGAAGATCCGAAATACGGGACTCCTGAAATTTCCGGGGAGGATGAAGTCGAGTCCTGATAGAAGAGACAAA
AGCCAGTATTGCCTTTTCCACCGGGACCATGGACATTCAACTAGGAATTGTATTCAATTGAAGGATGAAATCGAAGCACTGATCCAGAATGGGTATCAGAAGGAGTTCGT
CGGTGAGCCCAAGACCGAGGCCGACCAAAGATGGCCGAGACAAAGAAGAACCCCTACGGGAGATCAGAACCATCTTTGGAGGACCAGCTGGAGGAGGTTCAAACAGGAAG
AGGAAAGCTATTGCCAGGGAAGCAAGGTTCGAACCAGAGTATCGAGCCCTATTGATTCACCATTAAAGTTCAGTATTCAAGAGTGTGCACAAGACAACCGATTCAAGCAT
CACGAAACGCGAGCCTCGACCGCCGAGTCTACCTCGCCCCATCGACTTGAGACAATATTGAGACTATGTGAGCCTGGACCACCGAGTTTACCTCACCTCATCTGGCCTGA
GCATCCTCACGTCGGGCGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCAAACTTGAGATTGCATGAGCCTGGACCACCGAAGTCTACCTCACCCGAGTCTAGCTCAC
CTGGCTGGGGCAGAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTAAGGGGATGGAGAAGAGAAATCAAGACATAAACACAGAAAATTCGGATGGTGACCGCCACCAGCGGAGGTCACGGGAAGAAGGCCGAGATCGACCTCAGACCGA
ATCTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAGCTGATCTAAAATTTTCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCATAATTTGTCCAGGA
TACTTCGTATCTTGGATAAACCTGGTCCTAGCACTAAAACCCCTGATGAGAGGTTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCATGGAGCACACTACAGAATCGGAG
ACGAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGATCAGGGGGATCAAGCCTACTGATCGTACAATTTTGAGGAGCCCAGAGTCAAGCACACTTAGGAGACG
TGACTACACAGTTTCTACCCCAAGCTATGGTCATACTAAGACAGACCAGAGGAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTCCCGAATCCGAGGCCAGAGCTG
CCAAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAACCGAGGTCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAAGACAATCCCCCTTGGAAGACCGAGCTT
CTAAACACACTAAAGGAACTCGGAAATCCTCAGGGAGACCTGCAGACCGCAAAAGAGTTGCTCAAGTCGAAGAAGTCAGAACGTGAACACAAGAGGTGTTCTTCATCTGA
CCGCGACAGTAGGAAGGACAAAAGGCAGCGGACCGACGAGGGAGACCGAGGCCGACCAGACCATGGCCGAGGCCGACTAGACCAAGCACATCCCTTTGGTAAGTTCGAGA
AATATACACCGACAGTTGTTCCACAGAAGCAAGTACTGATGAAGATCCGAAATACGGGACTCCTGAAATTTCCGGGGAGGATGAAGTCGAGTCCTGATAGAAGAGACAAA
AGCCAGTATTGCCTTTTCCACCGGGACCATGGACATTCAACTAGGAATTGTATTCAATTGAAGGATGAAATCGAAGCACTGATCCAGAATGGGTATCAGAAGGAGTTCGT
CGGTGAGCCCAAGACCGAGGCCGACCAAAGATGGCCGAGACAAAGAAGAACCCCTACGGGAGATCAGAACCATCTTTGGAGGACCAGCTGGAGGAGGTTCAAACAGGAAG
AGGAAAGCTATTGCCAGGGAAGCAAGGTTCGAACCAGAGTATCGAGCCCTATTGATTCACCATTAAAGTTCAGTATTCAAGAGTGTGCACAAGACAACCGATTCAAGCAT
CACGAAACGCGAGCCTCGACCGCCGAGTCTACCTCGCCCCATCGACTTGAGACAATATTGAGACTATGTGAGCCTGGACCACCGAGTTTACCTCACCTCATCTGGCCTGA
GCATCCTCACGTCGGGCGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCAAACTTGAGATTGCATGAGCCTGGACCACCGAAGTCTACCTCACCCGAGTCTAGCTCAC
CTGGCTGGGGCAGAAATTGA
Protein sequenceShow/hide protein sequence
MIKGMEKRNQDINTENSDGDRHQRRSREEGRDRPQTESPRPRSPLPSSREKQADLKFSALENKVSAMDHNLSRILRILDKPGPSTKTPDERLVRDPRKGKEPMEHTTESE
TRSKGKKTSSMTSKIRGIKPTDRTILRSPESSTLRRRDYTVSTPSYGHTKTDQRNLIEEKRRSAKTPESEARAAKAEARAAEAEARATEVEARLAEAEAKKDNPPWKTEL
LNTLKELGNPQGDLQTAKELLKSKKSEREHKRCSSSDRDSRKDKRQRTDEGDRGRPDHGRGRLDQAHPFGKFEKYTPTVVPQKQVLMKIRNTGLLKFPGRMKSSPDRRDK
SQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYQKEFVGEPKTEADQRWPRQRRTPTGDQNHLWRTSWRRFKQEEESYCQGSKVRTRVSSPIDSPLKFSIQECAQDNRFKH
HETRASTAESTSPHRLETILRLCEPGPPSLPHLIWPEHPHVGRAWTTESTSPHPNLRLHEPGPPKSTSPESSSPGWGRN