; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg008391 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008391
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiongeranylgeranyl pyrophosphate synthase, chloroplastic-like
Genome locationscaffold10:33800475..33800861
RNA-Seq ExpressionSpg008391
SyntenySpg008391
Gene Ontology termsGO:0008299 - isoprenoid biosynthetic process (biological process)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR008949 - Isoprenoid synthase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAY43756.1 hypothetical protein CUMW_076950 [Citrus unshiu]2.0e-1962.34Show/hide
Query:  PSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDKLKPCPLLAPLK
        P LP F+F++Y++SK KRVN+ALD+TV L+HP +IHEAMRYSLL  GKR RPVLC+ASCEL+GGD+    P+   L+
Subjt:  PSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDKLKPCPLLAPLK

QFU96147.1 geranylgeranyl diphosphate synthase 8 [Tripterygium wilfordii]1.5e-1946.15Show/hide
Query:  LRSLNNGFKSNQRRTTF-AKAEAFNVFTDIEKYSLKNNNDPSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCE
        L+ L+NG K   R     AK     +     +  +  + +PSL +F+F +Y+SSK ++VN+ALD+ VPL+HP +IHEAMRYSLL  GKR RPVLC+ASCE
Subjt:  LRSLNNGFKSNQRRTTF-AKAEAFNVFTDIEKYSLKNNNDPSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCE

Query:  LIGGDKLKPCPLLAPLK
        L+GGD+    P+   ++
Subjt:  LIGGDKLKPCPLLAPLK

XP_006430612.1 geranylgeranyl pyrophosphate synthase 7, chloroplastic [Citrus clementina]2.0e-1962.34Show/hide
Query:  PSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDKLKPCPLLAPLK
        P LP F+F++Y++SK KRVN+ALD+TV L+HP +IHEAMRYSLL  GKR RPVLC+ASCEL+GGD+    P+   L+
Subjt:  PSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDKLKPCPLLAPLK

XP_006482126.1 geranylgeranyl pyrophosphate synthase 7, chloroplastic-like [Citrus sinensis]2.0e-1962.34Show/hide
Query:  PSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDKLKPCPLLAPLK
        P LP F+F++Y++SK KRVN+ALD+TV L+HP +IHEAMRYSLL  GKR RPVLC+ASCEL+GGD+    P+   L+
Subjt:  PSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDKLKPCPLLAPLK

XP_038701796.1 geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic-like [Tripterygium wilfordii]1.5e-1946.15Show/hide
Query:  LRSLNNGFKSNQRRTTF-AKAEAFNVFTDIEKYSLKNNNDPSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCE
        L+ L+NG K   R     AK     +     +  +  + +PSL +F+F +Y+SSK ++VN+ALD+ VPL+HP +IHEAMRYSLL  GKR RPVLC+ASCE
Subjt:  LRSLNNGFKSNQRRTTF-AKAEAFNVFTDIEKYSLKNNNDPSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCE

Query:  LIGGDKLKPCPLLAPLK
        L+GGD+    P+   ++
Subjt:  LIGGDKLKPCPLLAPLK

TrEMBL top hitse value%identityAlignment
A0A140CWP4 Geranylgeranyl diphosphate synthase3.7e-1945.76Show/hide
Query:  FHPLRSL-----NNGFKSNQRRTTFAKAEAFNVFTDIEKYSLKNNNDPSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPV
        F+PLR+L     ++   + +RR   +    ++V T  ++ +LK   DP  P F+FK Y+ +K   VN+ALD  VPL+ P +IHEAMRYSLL  GKR RPV
Subjt:  FHPLRSL-----NNGFKSNQRRTTFAKAEAFNVFTDIEKYSLKNNNDPSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPV

Query:  LCLASCELIGGDKLKPCP
        LCLA+CEL+GG +    P
Subjt:  LCLASCELIGGDKLKPCP

A0A2H5NUF2 Uncharacterized protein9.6e-2062.34Show/hide
Query:  PSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDKLKPCPLLAPLK
        P LP F+F++Y++SK KRVN+ALD+TV L+HP +IHEAMRYSLL  GKR RPVLC+ASCEL+GGD+    P+   L+
Subjt:  PSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDKLKPCPLLAPLK

A0A5P9Q552 Geranylgeranyl diphosphate synthase 87.4e-2046.15Show/hide
Query:  LRSLNNGFKSNQRRTTF-AKAEAFNVFTDIEKYSLKNNNDPSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCE
        L+ L+NG K   R     AK     +     +  +  + +PSL +F+F +Y+SSK ++VN+ALD+ VPL+HP +IHEAMRYSLL  GKR RPVLC+ASCE
Subjt:  LRSLNNGFKSNQRRTTF-AKAEAFNVFTDIEKYSLKNNNDPSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCE

Query:  LIGGDKLKPCPLLAPLK
        L+GGD+    P+   ++
Subjt:  LIGGDKLKPCPLLAPLK

A0A7J9FR19 Uncharacterized protein3.7e-1942.98Show/hide
Query:  FGFHPLRSLNNGFKSNQRRTTFAKAEAFNVFTDIEKYSLKNNNDPSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCL
        F F+PL+++++   S  +R +F    + ++    E   L+ + DP LP F+FK ++  K   VN+ALD  VPL+ P +IHEAMRYSLL  GKR RPVLCL
Subjt:  FGFHPLRSLNNGFKSNQRRTTFAKAEAFNVFTDIEKYSLKNNNDPSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCL

Query:  ASCELIGGDKLKPCPLLAPLK
        A+C+L+GG +    P    L+
Subjt:  ASCELIGGDKLKPCPLLAPLK

V4ST05 Uncharacterized protein9.6e-2062.34Show/hide
Query:  PSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDKLKPCPLLAPLK
        P LP F+F++Y++SK KRVN+ALD+TV L+HP +IHEAMRYSLL  GKR RPVLC+ASCEL+GGD+    P+   L+
Subjt:  PSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDKLKPCPLLAPLK

SwissProt top hitse value%identityAlignment
A0A0U3BRC5 Geranylfarnesyl diphosphate synthase, chloroplastic3.7e-1653.42Show/hide
Query:  KFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDKLKPCPLLAPLK
        +F+FK Y+  KI  VN+ALD  +P++ P +IHEAMRYSLLL GKR  P++CLA+C L+GGD+    P  A L+
Subjt:  KFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDKLKPCPLLAPLK

P34802 Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic3.7e-1654.79Show/hide
Query:  NDPSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDKLKPCP
        ++PS   F+F  Y+ +K + VN+ALD  VPL+ P +IHEAMRYSLL  GKR RPVLC+A+CEL+GG++    P
Subjt:  NDPSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDKLKPCP

Q43133 Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic1.6e-1654.67Show/hide
Query:  NNNDPSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDKLKPCP
        NN   S   F+F  Y+  K   VN+ALD  VPL+ P +IHEAMRYSLL  GKR RPVLC+A+CEL+GG++    P
Subjt:  NNNDPSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDKLKPCP

Q94ID7 Geranylgeranyl pyrophosphate synthase, chloroplastic1.3e-1842.48Show/hide
Query:  FHPLRSLNNGFKSNQRRTTFAKAEAFNVFTDIEKYSLKNNNDPSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLAS
        F+PL+SL   F   +     +   A  + T  E+   +  N+P  P F+FK Y+  K   +N+AL+  +PLQ P +IHE+MRYSLL  GKR RP LCLA+
Subjt:  FHPLRSLNNGFKSNQRRTTFAKAEAFNVFTDIEKYSLKNNNDPSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLAS

Query:  CELIGGDKLKPCP
        CEL+GG+     P
Subjt:  CELIGGDKLKPCP

Q9SLG2 Geranylgeranyl pyrophosphate synthase 44.8e-1642.86Show/hide
Query:  LRSLNNGFKSNQRRTTFAKAEAFNVFTDIEKYSLKNNNDPSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCEL
        +R L+   KS      FA+ +    F D     L N  D     F+FK Y+ SK + +N ALD+ +PL  P  IH+AMRY++L  GKR RP+LCLA+CEL
Subjt:  LRSLNNGFKSNQRRTTFAKAEAFNVFTDIEKYSLKNNNDPSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCEL

Query:  IGGDK
        +GG++
Subjt:  IGGDK

Arabidopsis top hitse value%identityAlignment
AT2G18620.1 Terpenoid synthases superfamily protein6.4e-1656.06Show/hide
Query:  FEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDKLKPCP
        F+F  Y+  K   VNEALD  V L+ P +IHEA+RYSLL  GKR RPVLC+A+CEL+GG++    P
Subjt:  FEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDKLKPCP

AT2G18640.1 geranylgeranyl pyrophosphate synthase 43.4e-1742.86Show/hide
Query:  LRSLNNGFKSNQRRTTFAKAEAFNVFTDIEKYSLKNNNDPSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCEL
        +R L+   KS      FA+ +    F D     L N  D     F+FK Y+ SK + +N ALD+ +PL  P  IH+AMRY++L  GKR RP+LCLA+CEL
Subjt:  LRSLNNGFKSNQRRTTFAKAEAFNVFTDIEKYSLKNNNDPSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCEL

Query:  IGGDK
        +GG++
Subjt:  IGGDK

AT2G23800.1 geranylgeranyl pyrophosphate synthase 21.3e-1654.55Show/hide
Query:  FEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDKLKPCP
        FEF  Y+ SK + VN+AL++ +P+  P +IHEAMRY++L +GKR RP+LCLASCEL+GG +    P
Subjt:  FEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDKLKPCP

AT3G14530.1 Terpenoid synthases superfamily protein3.2e-1542.27Show/hide
Query:  KSNQRRTTFAKAEAFNVFTDIEKYSLKNNNDPSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDK
        KS ++RT  + + A            +  ++ +   F+FK Y+  K + VN ALD +VPL  P  I EA+RYSLL  GKR RP+LC+A+CEL+GGD+
Subjt:  KSNQRRTTFAKAEAFNVFTDIEKYSLKNNNDPSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDK

AT4G36810.1 geranylgeranyl pyrophosphate synthase 12.6e-1754.79Show/hide
Query:  NDPSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDKLKPCP
        ++PS   F+F  Y+ +K + VN+ALD  VPL+ P +IHEAMRYSLL  GKR RPVLC+A+CEL+GG++    P
Subjt:  NDPSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASCELIGGDKLKPCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTTGCCAAAGCTTTGTTTGGATTTCATCCTTTGAGGTCACTCAACAATGGCTTCAAAAGCAACCAAAGAAGAACAACATTTGCCAAAGCTGAAGCCTTTAATGT
ATTCACCGACATAGAGAAGTACTCATTGAAGAATAACAATGATCCTTCTTTGCCTAAGTTTGAATTCAAAGACTACTTGAGCTCCAAGATAAAGCGAGTGAATGAGGCTT
TGGATCAAACAGTGCCATTGCAGCACCCTACGCAGATCCATGAGGCCATGAGATACTCTCTTTTGTTGTCTGGAAAGCGCTTTCGCCCCGTTCTTTGCCTTGCGTCGTGT
GAGCTCATCGGTGGAGACAAGCTCAAGCCATGCCCGTTGCTTGCGCCATTGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTTGCCAAAGCTTTGTTTGGATTTCATCCTTTGAGGTCACTCAACAATGGCTTCAAAAGCAACCAAAGAAGAACAACATTTGCCAAAGCTGAAGCCTTTAATGT
ATTCACCGACATAGAGAAGTACTCATTGAAGAATAACAATGATCCTTCTTTGCCTAAGTTTGAATTCAAAGACTACTTGAGCTCCAAGATAAAGCGAGTGAATGAGGCTT
TGGATCAAACAGTGCCATTGCAGCACCCTACGCAGATCCATGAGGCCATGAGATACTCTCTTTTGTTGTCTGGAAAGCGCTTTCGCCCCGTTCTTTGCCTTGCGTCGTGT
GAGCTCATCGGTGGAGACAAGCTCAAGCCATGCCCGTTGCTTGCGCCATTGAAATGA
Protein sequenceShow/hide protein sequence
MAVAKALFGFHPLRSLNNGFKSNQRRTTFAKAEAFNVFTDIEKYSLKNNNDPSLPKFEFKDYLSSKIKRVNEALDQTVPLQHPTQIHEAMRYSLLLSGKRFRPVLCLASC
ELIGGDKLKPCPLLAPLK