; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg008406 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008406
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationscaffold10:36589985..36591897
RNA-Seq ExpressionSpg008406
SyntenySpg008406
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016421.1 Chlorophyll a-b binding protein CP24 10A, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]3.5e-13590.87Show/hide
Query:  MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFL
        MAATSGAVLNGLGSPFLRG SRT+TLLAG RGGVNV GSRKLVIVAAAQPKKSWIP V+GGGN VDPEWLDGS        LPGD+GFDPLGLGKDPAFL
Subjt:  MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFL

Query:  KWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP
        KWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP
Subjt:  KWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP

Query:  GGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GGKFFDPLGFAG+IKDGVYI D++KLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALG+
Subjt:  GGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

XP_004140973.1 chlorophyll a-b binding protein CP24 10A, chloroplastic [Cucumis sativus]2.7e-13591.25Show/hide
Query:  MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFL
        MAATSGAVL GLGSPFLRG+SRTRTLLAG RG VNV  S KLVIVAAAQPKKSW+PGVRGGGN VDPEWLDGS        LPGDYGFDPLGLGKDPAFL
Subjt:  MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFL

Query:  KWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP
        KWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP
Subjt:  KWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP

Query:  GGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GGKFFDPLGFAG++KDGVYIAD+EKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  GGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

XP_008441527.1 PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic [Cucumis melo]4.1e-13691.25Show/hide
Query:  MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFL
        MAATSGAVLNGLGSPFLRG+SRTRTLLAG RGGVNV  S KLV++AAAQPKKSWIPGVRGGGN VDPEWLDGS        LPGDYGFDPLGLGKDPAFL
Subjt:  MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFL

Query:  KWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP
        KWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP
Subjt:  KWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP

Query:  GGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GGKFFDPLGFAG++KDGVYI D+EKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  GGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

XP_022988907.1 chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita maxima]2.0e-13590.49Show/hide
Query:  MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFL
        MAATSGA+LNGLGSPFL G SRT+TLLAG RGGVNV  SRKLVIVAAAQPKKSWIP V+GGGNF+DPEWLDGS        LPGDYGFDPLGLGKDPAFL
Subjt:  MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFL

Query:  KWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP
        KWYREAELIHGRWAMAAVVGIF+GQAWSGIPWFEAGADPSA+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP
Subjt:  KWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP

Query:  GGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GGKFFDPLGFAG++KDGVYI D+EKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  GGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

XP_022993917.1 chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita maxima]1.6e-13591.25Show/hide
Query:  MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFL
        MAATSGAVLNGLGSPFLRG SRT+TLLAG RGGVNV GSRKLVIVAAAQPKKSWIP V+GGGN VDPEWLDGS        LPGD+GFDPLGLGKDPAFL
Subjt:  MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFL

Query:  KWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP
        KWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP
Subjt:  KWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP

Query:  GGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GGKFFDPLGFAG+IKDGVYI D+EKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALG+
Subjt:  GGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

TrEMBL top hitse value%identityAlignment
A0A0A0KEF5 Chlorophyll a-b binding protein, chloroplastic1.3e-13591.25Show/hide
Query:  MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFL
        MAATSGAVL GLGSPFLRG+SRTRTLLAG RG VNV  S KLVIVAAAQPKKSW+PGVRGGGN VDPEWLDGS        LPGDYGFDPLGLGKDPAFL
Subjt:  MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFL

Query:  KWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP
        KWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP
Subjt:  KWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP

Query:  GGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GGKFFDPLGFAG++KDGVYIAD+EKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  GGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

A0A1S3B4E4 Chlorophyll a-b binding protein, chloroplastic2.0e-13691.25Show/hide
Query:  MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFL
        MAATSGAVLNGLGSPFLRG+SRTRTLLAG RGGVNV  S KLV++AAAQPKKSWIPGVRGGGN VDPEWLDGS        LPGDYGFDPLGLGKDPAFL
Subjt:  MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFL

Query:  KWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP
        KWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP
Subjt:  KWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP

Query:  GGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GGKFFDPLGFAG++KDGVYI D+EKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  GGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

A0A5D3DGI0 Chlorophyll a-b binding protein, chloroplastic2.0e-13691.25Show/hide
Query:  MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFL
        MAATSGAVLNGLGSPFLRG+SRTRTLLAG RGGVNV  S KLV++AAAQPKKSWIPGVRGGGN VDPEWLDGS        LPGDYGFDPLGLGKDPAFL
Subjt:  MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFL

Query:  KWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP
        KWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP
Subjt:  KWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP

Query:  GGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GGKFFDPLGFAG++KDGVYI D+EKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  GGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

A0A6J1JEC2 Chlorophyll a-b binding protein, chloroplastic9.8e-13690.49Show/hide
Query:  MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFL
        MAATSGA+LNGLGSPFL G SRT+TLLAG RGGVNV  SRKLVIVAAAQPKKSWIP V+GGGNF+DPEWLDGS        LPGDYGFDPLGLGKDPAFL
Subjt:  MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFL

Query:  KWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP
        KWYREAELIHGRWAMAAVVGIF+GQAWSGIPWFEAGADPSA+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP
Subjt:  KWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP

Query:  GGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GGKFFDPLGFAG++KDGVYI D+EKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  GGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

A0A6J1JU87 Chlorophyll a-b binding protein, chloroplastic7.5e-13691.25Show/hide
Query:  MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFL
        MAATSGAVLNGLGSPFLRG SRT+TLLAG RGGVNV GSRKLVIVAAAQPKKSWIP V+GGGN VDPEWLDGS        LPGD+GFDPLGLGKDPAFL
Subjt:  MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFL

Query:  KWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP
        KWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP
Subjt:  KWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP

Query:  GGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GGKFFDPLGFAG+IKDGVYI D+EKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALG+
Subjt:  GGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

SwissProt top hitse value%identityAlignment
P13869 Chlorophyll a-b binding protein, chloroplastic2.4e-3035.32Show/hide
Query:  SGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFLKWYR
        +G+++    + FL G     +    P G  +VA S     VAA   +  W PG         PEWLDGS        LPGD+GFDPLGLG DP  LKW  
Subjt:  SGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFLKWYR

Query:  EAELIHGRWAMAAVVGIFVGQAWSGI------PWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQG
        +AEL+H RWAM    GIF+ +  + I       W+ AG            TL   +L+L+GW E +RW D   P   + +   P      N    T + G
Subjt:  EAELIHGRWAMAAVVGIFVGQAWSGI------PWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQG

Query:  YPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFE
        YPGG +FDPLG+              K++ L+  EIK+ R+AMLA++  +F+
Subjt:  YPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFE

P27524 Chlorophyll a-b binding protein CP24 10A, chloroplastic1.8e-11878.79Show/hide
Query:  MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGG-VNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAF
        MA TS AVLNGL S FL G ++++ LLA P    V  A + K   V AA  KKSWIP VRGGGN VDPEWLDGS        LPGDYGFDPLGLGKDPAF
Subjt:  MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGG-VNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAF

Query:  LKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGY
        LKWYREAELIHGRWAMAAV+GIFVGQAWSGIPWFEAGADP A+APFSFGTLLGTQL+LMGWVESKRWVDFF+P+SQSVEWATPWS+TAENFAN TGEQGY
Subjt:  LKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGY

Query:  PGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        PGGKFFDPL  AG++ +GVY+ D+EKLERLK+AEIKHAR+AMLAMLIFYFEAGQGKTPLGALGL
Subjt:  PGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

P27525 Chlorophyll a-b binding protein CP24 10B, chloroplastic3.0e-11375.85Show/hide
Query:  MAATSG-AVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAA-QPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPA
        M  TS  AVLNGL S FL G  +T+ LL G      V   ++ V+ AAA  PKKSWIP V+ GGN VDPEWLDGS        LPGD+GFDPLGLGKDPA
Subjt:  MAATSG-AVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAA-QPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPA

Query:  FLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQG
        FLKWYREAELIHGRWAMAAV+GIFVGQAWSGIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFF+ +SQS++WATPWS+TAENFAN TGEQG
Subjt:  FLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQG

Query:  YPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        YPGGKFFDPL  AG++ +GVY+ D+EKLERLKLAEIKH+R+AMLAMLIFYFEAGQGKTPLGALGL
Subjt:  YPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

P36494 Chlorophyll a-b binding protein CP24, chloroplastic2.4e-11577.9Show/hide
Query:  AATSG-AVLNGLGSPFLRGASRT--RTLLAGPRGGVNVA-GSRKLVIV-AAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKD
        AATS  A++NG  SPFL G  ++    L    + G  V+  SRKLV+V AAA PKKSWIP V+GGGNF+DPEWLDGS        LPGD+GFDPLGLGKD
Subjt:  AATSG-AVLNGLGSPFLRGASRT--RTLLAGPRGGVNVA-GSRKLVIV-AAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKD

Query:  PAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGE
        PAFLKWYREAELIHGRWAM AV+GIFVGQAW+GIPWFEAGADP AVAPFSFGTLLGTQLLLMGWVESKRWVDFF+P+SQSVEWATPWSRTAENF+N+TGE
Subjt:  PAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGE

Query:  QGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        QGYPGGKFFDPL  AG+I +GVY  D++KLERLKLAEIKHAR+AMLAMLIFYFEAGQGKTPLGALGL
Subjt:  QGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

Q8LCQ4 Photosystem I chlorophyll a/b-binding protein 6, chloroplastic2.0e-2936.48Show/hide
Query:  PFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKS-WIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFLKWYREAELIHGRW
        P +   S T   L   R  V  AG     +     P +  W PG         PEWLDGS        LPGD+GFDPLGLG DP  LKW+ +AELIH RW
Subjt:  PFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKS-WIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFLKWYREAELIHGRW

Query:  AMAAVVGIFVGQAW------SGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDP
        AM AV GI + +            W++AG+           TL   Q++LMGW E +RW D   P S  +E   P      +  N   + GYPGG +FD 
Subjt:  AMAAVVGIFVGQAW------SGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDP

Query:  LGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEA
        + +     + V +        L+  EIK+ R+AMLA L F F+A
Subjt:  LGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEA

Arabidopsis top hitse value%identityAlignment
AT1G15820.1 light harvesting complex photosystem II subunit 62.0e-11777.95Show/hide
Query:  ATSGAVLNGLGSPFLRGASRTRTLLAGPRG-GVNVAGSRKLVI-VAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFL
        A SGAVL+GLGS FL G  R  T LA   G G    G + L++  AAAQPKKSWIP V+GGGNF+DPEWLDGS        LPGD+GFDPLGLGKDPAFL
Subjt:  ATSGAVLNGLGSPFLRGASRTRTLLAGPRG-GVNVAGSRKLVI-VAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFL

Query:  KWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP
        KWYREAELIHGRWAMAAV+GIFVGQAWSG+ WFEAGA P A+APFSFG+LLGTQLLLMGWVESKRWVDFFNP+SQSVEWATPWS+TAENFAN TG+QGYP
Subjt:  KWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYP

Query:  GGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GG+FFDPLG AG  +DGVY  D EKLERLKLAEIKH+R+AM+AMLIFYFEAGQGKTPLGALGL
Subjt:  GGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

AT1G19150.1 photosystem I light harvesting complex gene 61.4e-3036.48Show/hide
Query:  PFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKS-WIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFLKWYREAELIHGRW
        P +   S T   L   R  V  AG     +     P +  W PG         PEWLDGS        LPGD+GFDPLGLG DP  LKW+ +AELIH RW
Subjt:  PFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKS-WIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFLKWYREAELIHGRW

Query:  AMAAVVGIFVGQAW------SGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDP
        AM AV GI + +            W++AG+           TL   Q++LMGW E +RW D   P S  +E   P      +  N   + GYPGG +FD 
Subjt:  AMAAVVGIFVGQAW------SGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDP

Query:  LGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEA
        + +     + V +        L+  EIK+ R+AMLA L F F+A
Subjt:  LGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEA

AT1G45474.1 photosystem I light harvesting complex gene 51.6e-2937.65Show/hide
Query:  GLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFLKWYREAELIH
        G+   FL       +++      V  AG    +    A  + +W+PG+        P +LDG+        L GDYGFDPLGLG+DP  LKWY +AEL+H
Subjt:  GLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFLKWYREAELIH

Query:  GRWAMAAVVGIFVGQ--AWSGI----PWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKF
         R+AM  V GI        +GI     W+EAGA     A  S  TL+  Q LLMG+ E+KR++DF +P SQ+ E +  +   A   A    E GYPGG  
Subjt:  GRWAMAAVVGIFVGQ--AWSGI----PWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKF

Query:  FDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEA
         +PLG A          D +     KL EIK+ R+AM+AML F+ +A
Subjt:  FDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEA

AT1G45474.2 photosystem I light harvesting complex gene 51.6e-2937.65Show/hide
Query:  GLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFLKWYREAELIH
        G+   FL       +++      V  AG    +    A  + +W+PG+        P +LDG+        L GDYGFDPLGLG+DP  LKWY +AEL+H
Subjt:  GLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFLKWYREAELIH

Query:  GRWAMAAVVGIFVGQ--AWSGI----PWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKF
         R+AM  V GI        +GI     W+EAGA     A  S  TL+  Q LLMG+ E+KR++DF +P SQ+ E +  +   A   A    E GYPGG  
Subjt:  GRWAMAAVVGIFVGQ--AWSGI----PWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKF

Query:  FDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEA
         +PLG A          D +     KL EIK+ R+AM+AML F+ +A
Subjt:  FDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEA

AT3G61470.1 photosystem I light harvesting complex gene 23.2e-3035.44Show/hide
Query:  GGVNVAGSRKLVIVAAAQPKKS------------WIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVV
        GG  +   +KL + A ++P  S            W PG         PEWLDGS        LPGD+GFDPLGL  DP  LKW  +AE++H RWAM    
Subjt:  GGVNVAGSRKLVIVAAAQPKKS------------WIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVV

Query:  GIFVGQAWSGI------PWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGS
        GIF+ +  + I       W+ AG            TL   +L+L+GW E +RW D   P S + +   P      N    T + GYPGG +FDPLG+   
Subjt:  GIFVGQAWSGI------PWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGS

Query:  IKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFE
                   KL+ L+  EIK+ R+AMLA++  +F+
Subjt:  IKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCAACTTCTGGTGCTGTGCTTAATGGCTTGGGCTCACCCTTCCTCCGTGGAGCTAGCAGAACCCGGACCTTGCTTGCTGGACCCAGAGGCGGTGTCAATGTCGC
CGGCTCTCGCAAGCTCGTCATCGTCGCCGCTGCTCAGCCCAAGAAGTCTTGGATCCCCGGCGTTCGAGGGGGCGGCAACTTCGTCGACCCAGAATGGCTAGATGGCTCGT
ATGTCTCTCTTACTTTCTCCAAACTTCCAGGCGACTACGGCTTCGACCCTCTGGGGTTGGGGAAGGACCCAGCATTTCTGAAGTGGTACAGAGAGGCAGAGCTGATCCAC
GGCCGGTGGGCAATGGCAGCAGTGGTCGGAATCTTCGTAGGGCAAGCCTGGAGTGGAATCCCATGGTTCGAAGCCGGAGCCGATCCGAGCGCAGTCGCCCCATTCTCCTT
CGGAACACTGCTCGGAACCCAGCTTCTGCTAATGGGATGGGTGGAGAGCAAGCGGTGGGTGGATTTCTTCAACCCAGAGTCGCAGTCCGTCGAATGGGCGACGCCATGGT
CGAGGACGGCAGAGAACTTCGCAAACGCGACGGGAGAACAGGGGTATCCCGGAGGAAAATTCTTCGATCCGTTGGGATTTGCAGGAAGTATTAAGGATGGGGTTTACATT
GCGGACTCGGAGAAGTTGGAGAGATTGAAGTTGGCGGAGATCAAGCATGCTAGGATCGCCATGTTAGCGATGCTCATCTTCTACTTCGAAGCTGGACAGGGGAAGACGCC
GTTGGGTGCCCTTGGATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCAACTTCTGGTGCTGTGCTTAATGGCTTGGGCTCACCCTTCCTCCGTGGAGCTAGCAGAACCCGGACCTTGCTTGCTGGACCCAGAGGCGGTGTCAATGTCGC
CGGCTCTCGCAAGCTCGTCATCGTCGCCGCTGCTCAGCCCAAGAAGTCTTGGATCCCCGGCGTTCGAGGGGGCGGCAACTTCGTCGACCCAGAATGGCTAGATGGCTCGT
ATGTCTCTCTTACTTTCTCCAAACTTCCAGGCGACTACGGCTTCGACCCTCTGGGGTTGGGGAAGGACCCAGCATTTCTGAAGTGGTACAGAGAGGCAGAGCTGATCCAC
GGCCGGTGGGCAATGGCAGCAGTGGTCGGAATCTTCGTAGGGCAAGCCTGGAGTGGAATCCCATGGTTCGAAGCCGGAGCCGATCCGAGCGCAGTCGCCCCATTCTCCTT
CGGAACACTGCTCGGAACCCAGCTTCTGCTAATGGGATGGGTGGAGAGCAAGCGGTGGGTGGATTTCTTCAACCCAGAGTCGCAGTCCGTCGAATGGGCGACGCCATGGT
CGAGGACGGCAGAGAACTTCGCAAACGCGACGGGAGAACAGGGGTATCCCGGAGGAAAATTCTTCGATCCGTTGGGATTTGCAGGAAGTATTAAGGATGGGGTTTACATT
GCGGACTCGGAGAAGTTGGAGAGATTGAAGTTGGCGGAGATCAAGCATGCTAGGATCGCCATGTTAGCGATGCTCATCTTCTACTTCGAAGCTGGACAGGGGAAGACGCC
GTTGGGTGCCCTTGGATTGTAA
Protein sequenceShow/hide protein sequence
MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFLKWYREAELIH
GRWAMAAVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSIKDGVYI
ADSEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL