CuGenDBv2

Gene ID	Spg008415
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	psbQ-like protein 3, chloroplastic
Genome location	scaffold10:33092902..33093857
RNA-Seq Expression	Spg008415
Synteny	Spg008415
Gene Ontology terms	GO:0009767 - photosynthetic electron transport chain (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0009654 - photosystem II oxygen evolving complex (cellular component) GO:0019898 - extrinsic component of membrane (cellular component) GO:0005509 - calcium ion binding (molecular function) GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function)
InterPro domains	IPR008797 - Oxygen-evolving enhancer protein 3 IPR023222 - PsbQ-like domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6601995.1 Auxin response factor 8, partial [Cucurbita argyrosperma subsp. sororia]

1.0e-72

82.8

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Query:  MAELSPISISNLSNRIHF-SPSPTTISFHSFKITGNRSNKCTNISRRLGLGLIALMA-SSVATSPVKMATALDLKLIAPEQSFEEAESGIRSHAEALLQV
        MAELSPIS+SNLSNRIHF S SP   S   F IT  R + C +ISRRLGLGLIAL+A SSVA++PV++A ALDLKLIAPEQSFEEAESGIR HAEA+LQV
Subjt:  MAELSPISISNLSNRIHF-SPSPTTISFHSFKITGNRSNKCTNISRRLGLGLIALMA-SSVATSPVKMATALDLKLIAPEQSFEEAESGIRSHAEALLQV

Query:  RGLIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAISDILSRI
        RGLIESESWKEAQKQLR+SSPLLKQDLYTIIEYKPP ERPPLRKLYS+LFNNVTRMDYAARDKDAERV QCY+NI MAISDILSRI
Subjt:  RGLIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAISDILSRI

KAG7032694.1 PsbQ-like protein 3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]

1.5e-73

83.87

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Query:  MAELSPISISNLSNRIHF-SPSPTTISFHSFKITGNRSNKCTNISRRLGLGLIALMA-SSVATSPVKMATALDLKLIAPEQSFEEAESGIRSHAEALLQV
        MAELSPIS+SNLSNRIHF S SP   S   F IT  R + C +ISRRLGLGLIALMA SSVA++PV++A ALDLKLIAPEQSFEEAESGIR HAEA+LQV
Subjt:  MAELSPISISNLSNRIHF-SPSPTTISFHSFKITGNRSNKCTNISRRLGLGLIALMA-SSVATSPVKMATALDLKLIAPEQSFEEAESGIRSHAEALLQV

Query:  RGLIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAISDILSRI
        RGLIESESWKEAQKQLR+SSPLLKQDLYTIIEYKPPAERPPLRKLYS+LFNNVTRMDYAARDKDAERV QCY+NI MAISDILSRI
Subjt:  RGLIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAISDILSRI

XP_022962345.1 psbQ-like protein 3, chloroplastic isoform X1 [Cucurbita moschata]

3.1e-74

84.41

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Query:  MAELSPISISNLSNRIHF-SPSPTTISFHSFKITGNRSNKCTNISRRLGLGLIALMA-SSVATSPVKMATALDLKLIAPEQSFEEAESGIRSHAEALLQV
        MAELSPIS+SNLSNRIHF S SP   S   F IT  R + C +ISRRLGLGLIALMA SSVA++PV++A ALDLKLIAPEQSFEEAESGIR HAEA+LQV
Subjt:  MAELSPISISNLSNRIHF-SPSPTTISFHSFKITGNRSNKCTNISRRLGLGLIALMA-SSVATSPVKMATALDLKLIAPEQSFEEAESGIRSHAEALLQV

Query:  RGLIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAISDILSRI
        RGLIESESWKEAQKQLR+SSPLLKQDLYTIIEYKPPAERPPLRKLYS+LFNNVTRMDYAARDKDAERV QCY+NIVMAISDILSRI
Subjt:  RGLIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAISDILSRI

XP_022991100.1 psbQ-like protein 3, chloroplastic isoform X1 [Cucurbita maxima]

2.1e-78

85.95

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Query:  MAELSPISISNLSNRIHFSPSPTTISFHSFKITGNRSNKCTNISRRLGLGLIALMA-SSVATSPVKMATALDLKLIAPEQSFEEAESGIRSHAEALLQVR
        MAELSPIS+SNLSNRIHFS SP  ISF  F IT  R + C +ISRRLGLG +ALMA SSVA++PVK+  ALDLKLIAPEQSFEEAESGIR HAEA+LQVR
Subjt:  MAELSPISISNLSNRIHFSPSPTTISFHSFKITGNRSNKCTNISRRLGLGLIALMA-SSVATSPVKMATALDLKLIAPEQSFEEAESGIRSHAEALLQVR

Query:  GLIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAISDILSRI
        GLIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYS+LFNNVTRMDYAARDKDAERVWQCY+NIVMAISDILSRI
Subjt:  GLIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAISDILSRI

XP_023551782.1 psbQ-like protein 3, chloroplastic [Cucurbita pepo subsp. pepo]

2.2e-75

84.21

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Query:  MAELSPISISNLSNRIHF-SPSPTTISFHSFKITGNRSNKC----TNISRRLGLGLIALMA-SSVATSPVKMATALDLKLIAPEQSFEEAESGIRSHAEA
        MAELSPIS+SNLSNRIHF S SP  IS   F IT  R + C     +ISRRLGLGLIALMA SSVA++PVK+A ALDLKLIAPEQSFEEAESGIR HAEA
Subjt:  MAELSPISISNLSNRIHF-SPSPTTISFHSFKITGNRSNKC----TNISRRLGLGLIALMA-SSVATSPVKMATALDLKLIAPEQSFEEAESGIRSHAEA

Query:  LLQVRGLIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAISDILSRI
        +LQVRGLIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPAERPPLR+LYS+LFNNVTRMDYAARDKDAERVWQCY+NIVMAISDILSRI
Subjt:  LLQVRGLIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAISDILSRI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KT23 Uncharacterized protein

9.5e-69

78.26

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Query:  MAELSPISISNLSNRIHFSPSPTTISFHSFKITGNRSNKCTNISRRLGLGLIALMASSVATSPVKMATALDLKLIAPEQSFEEAESGIRSHAEALLQVRG
        MA+L PIS+SNL+NRIHFS SP TISF SF  T N SN  TNISRRLGLG IALMASSV   P ++A ALDLKLIAPEQS +EAESGIR HAEALLQVR 
Subjt:  MAELSPISISNLSNRIHFSPSPTTISFHSFKITGNRSNKCTNISRRLGLGLIALMASSVATSPVKMATALDLKLIAPEQSFEEAESGIRSHAEALLQVRG

Query:  LIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAISDILSRI
        LIESE+WKEAQK+LRS+S LLKQDLYTIIEYKPPAERP LRKLYS+LFNNVTRMDYAARDKD   VW+ Y  + MAISDILSRI
Subjt:  LIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAISDILSRI

A0A1S3CIJ1 psbQ-like protein 3, chloroplastic

2.0e-66

76.09

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Query:  MAELSPISISNLSNRIHFSPSPTTISFHSFKITGNRSNKCTNISRRLGLGLIALMASSVATSPVKMATALDLKLIAPEQSFEEAESGIRSHAEALLQVRG
        MA+L PIS+SNL+NRIHFS SP TISF SF  T N S    NISRRLGLG IALMASSV   P ++A AL+LKLIAPEQS +EAE GIR HAEALLQVR 
Subjt:  MAELSPISISNLSNRIHFSPSPTTISFHSFKITGNRSNKCTNISRRLGLGLIALMASSVATSPVKMATALDLKLIAPEQSFEEAESGIRSHAEALLQVRG

Query:  LIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAISDILSRI
        L+ESE+WKEAQK+LRS+S LLKQDLYTIIEYKPPAERP LRKLYS+LFNNVTRMDYAARDKDA  V +CY  + MAISDILSRI
Subjt:  LIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAISDILSRI

A0A5A7VLN5 PsbQ-like protein 3

2.0e-66

76.09

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Query:  MAELSPISISNLSNRIHFSPSPTTISFHSFKITGNRSNKCTNISRRLGLGLIALMASSVATSPVKMATALDLKLIAPEQSFEEAESGIRSHAEALLQVRG
        MA+L PIS+SNL+NRIHFS SP TISF SF  T N S    NISRRLGLG IALMASSV   P ++A AL+LKLIAPEQS +EAE GIR HAEALLQVR 
Subjt:  MAELSPISISNLSNRIHFSPSPTTISFHSFKITGNRSNKCTNISRRLGLGLIALMASSVATSPVKMATALDLKLIAPEQSFEEAESGIRSHAEALLQVRG

Query:  LIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAISDILSRI
        L+ESE+WKEAQK+LRS+S LLKQDLYTIIEYKPPAERP LRKLYS+LFNNVTRMDYAARDKDA  V +CY  + MAISDILSRI
Subjt:  LIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAISDILSRI

A0A6J1HES6 psbQ-like protein 3, chloroplastic isoform X1

1.5e-74

84.41

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Query:  MAELSPISISNLSNRIHF-SPSPTTISFHSFKITGNRSNKCTNISRRLGLGLIALMA-SSVATSPVKMATALDLKLIAPEQSFEEAESGIRSHAEALLQV
        MAELSPIS+SNLSNRIHF S SP   S   F IT  R + C +ISRRLGLGLIALMA SSVA++PV++A ALDLKLIAPEQSFEEAESGIR HAEA+LQV
Subjt:  MAELSPISISNLSNRIHF-SPSPTTISFHSFKITGNRSNKCTNISRRLGLGLIALMA-SSVATSPVKMATALDLKLIAPEQSFEEAESGIRSHAEALLQV

Query:  RGLIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAISDILSRI
        RGLIESESWKEAQKQLR+SSPLLKQDLYTIIEYKPPAERPPLRKLYS+LFNNVTRMDYAARDKDAERV QCY+NIVMAISDILSRI
Subjt:  RGLIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAISDILSRI

A0A6J1JRX6 psbQ-like protein 3, chloroplastic isoform X1

1.0e-78

85.95

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Query:  MAELSPISISNLSNRIHFSPSPTTISFHSFKITGNRSNKCTNISRRLGLGLIALMA-SSVATSPVKMATALDLKLIAPEQSFEEAESGIRSHAEALLQVR
        MAELSPIS+SNLSNRIHFS SP  ISF  F IT  R + C +ISRRLGLG +ALMA SSVA++PVK+  ALDLKLIAPEQSFEEAESGIR HAEA+LQVR
Subjt:  MAELSPISISNLSNRIHFSPSPTTISFHSFKITGNRSNKCTNISRRLGLGLIALMA-SSVATSPVKMATALDLKLIAPEQSFEEAESGIRSHAEALLQVR

Query:  GLIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAISDILSRI
        GLIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYS+LFNNVTRMDYAARDKDAERVWQCY+NIVMAISDILSRI
Subjt:  GLIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAISDILSRI

SwissProt top hits

e value

%identity

Alignment

Q2V4B2 PsbQ-like protein 3, chloroplastic

6.4e-22

48.62

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Query:  PEQSFEEAESGIRSHAEALLQVRG-LIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVM
        PE++ E A+ G+R +AE + +++  +IE + WKE  K+LR S+  +KQD Y II+ KPP +RP  R LYS LFN++T+MDYAARD D  +V + Y NIV 
Subjt:  PEQSFEEAESGIRSHAEALLQVRG-LIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVM

Query:  AISDILSRI
         + DI  RI
Subjt:  AISDILSRI

Arabidopsis top hits

e value

%identity

Alignment

AT2G01918.1 PsbQ-like 3

4.5e-23

48.62

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Query:  PEQSFEEAESGIRSHAEALLQVRG-LIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVM
        PE++ E A+ G+R +AE + +++  +IE + WKE  K+LR S+  +KQD Y II+ KPP +RP  R LYS LFN++T+MDYAARD D  +V + Y NIV 
Subjt:  PEQSFEEAESGIRSHAEALLQVRG-LIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVM

Query:  AISDILSRI
         + DI  RI
Subjt:  AISDILSRI

AT3G01440.1 PsbQ-like 1

1.6e-04

24.74

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Query:  IRSHAEALLQVRGLIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAISDILSRI
        ++ +A  LL +  LI  ++    +K LR  S  L  D   +I      ++ PL  L + LF+N  +++ AA+ K+      CY +    + ++++R+
Subjt:  IRSHAEALLQVRGLIESESWKEAQKQLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAISDILSRI

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGGAATTAAGCCCAATCTCAATCTCAAACCTCAGCAATCGCATCCATTTCTCTCCTTCTCCTACCACGATCTCCTTCCACTCATTCAAGATCACAGGCAATCGTTC
TAACAAGTGCACAAACATTAGCAGAAGATTGGGGCTGGGATTGATAGCTTTAATGGCGTCGTCAGTAGCAACATCGCCGGTGAAAATGGCGACTGCTTTGGATCTGAAAT
TGATCGCGCCGGAGCAGAGTTTCGAGGAGGCCGAGAGCGGAATCAGAAGCCACGCAGAAGCGCTTTTGCAGGTTAGAGGTTTAATTGAATCGGAGTCTTGGAAGGAAGCT
CAGAAGCAGTTGAGAAGCAGTTCGCCGCTGCTGAAACAGGATCTCTACACTATAATTGAATACAAACCGCCTGCCGAGCGACCTCCTCTCAGGAAACTGTACTCTGTTCT
CTTCAACAATGTCACTCGAATGGATTATGCAGCGAGAGATAAAGATGCAGAACGAGTTTGGCAGTGCTACAATAACATTGTGATGGCCATCTCTGACATTTTGTCCAGAA
TTTAG

mRNA sequence

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Protein sequence

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MAELSPISISNLSNRIHFSPSPTTISFHSFKITGNRSNKCTNISRRLGLGLIALMASSVATSPVKMATALDLKLIAPEQSFEEAESGIRSHAEALLQVRGLIESESWKEA
QKQLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYNNIVMAISDILSRI

Spg008415 (gene) of Sponge gourd (cylindrica) v1 genome