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Spg008421 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008421
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiontransmembrane protein 50A
Genome locationscaffold10:34383765..34389938
RNA-Seq ExpressionSpg008421
SyntenySpg008421
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8077392.1 hypothetical protein FH972_015959 [Carpinus fangiana]4.6e-1540.14Show/hide
Query:  IFASFAALMFNCVRKEDIDYSPYEEGEWSIELETSIEVQRKVFKFQIEFTKGALNLAGGLIRCGLVPGLFFLVATEAMVSCCAHSPVANALDICLLKVEA
        IFASFAALMFNCVRKEDIDYSPYEEGEW                                 R G                           ++ L  +EA
Subjt:  IFASFAALMFNCVRKEDIDYSPYEEGEWSIELETSIEVQRKVFKFQIEFTKGALNLAGGLIRCGLVPGLFFLVATEAMVSCCAHSPVANALDICLLKVEA

Query:  LALLRLCGIIRFISSISGTLDTRFDSKNWPISVDRSCRSIAVCVCVG
        LA LRLC ++   S ISG++DT F   NWP  VD +CR +AVCV VG
Subjt:  LALLRLCGIIRFISSISGTLDTRFDSKNWPISVDRSCRSIAVCVCVG

KAF4352908.1 hypothetical protein F8388_003299 [Cannabis sativa]1.3e-1439.07Show/hide
Query:  LYSFTSIFASFAALMFNCVRKEDIDYSPYEEGEWSIELETSIEVQRKVFKFQIEFTKGALNLAGGLIRCGLVPGLFFLVATEAMVSCCAHSPVANALDIC
        L+    IFAS AALMFNCVRKEDIDYSPYEEGEW            + +   +E   G                   LV  +            N     
Subjt:  LYSFTSIFASFAALMFNCVRKEDIDYSPYEEGEWSIELETSIEVQRKVFKFQIEFTKGALNLAGGLIRCGLVPGLFFLVATEAMVSCCAHSPVANALDIC

Query:  LLKVEALALLRLCGIIRFISSISGTLDTRFDSKNWPISVDRSCRSIAVCVC
          +VEALA+L +C ++ F    SG+ DTRF S+NWP S+DR+   +AVCVC
Subjt:  LLKVEALALLRLCGIIRFISSISGTLDTRFDSKNWPISVDRSCRSIAVCVC

KAF9687258.1 hypothetical protein SADUNF_Sadunf02G0074800 [Salix dunnii]2.7e-1540.96Show/hide
Query:  IFASFAALMFNCVRKEDIDYSPYEEGEWSI--------ELETSIEVQRKVFKFQIEF---TKGALNLAGGLIRCGLVPGLFFLVATEAMVSCCAHSPVAN
        IFAS AALMFNCVRKEDIDYSPYEEGEWS          L  +  V+      Q  F    + A   +  L+    + GL+ L         C   P   
Subjt:  IFASFAALMFNCVRKEDIDYSPYEEGEWSI--------ELETSIEVQRKVFKFQIEF---TKGALNLAGGLIRCGLVPGLFFLVATEAMVSCCAHSPVAN

Query:  ALDICLL----------KVEALALLRLCGIIRFISSISGTLDTRFDSKNWPISVDRSCRSIAVCVC
         +D  LL           +EALA L +C ++R  SSISG +D+RF  +N   SVDR+C   AVCVC
Subjt:  ALDICLL----------KVEALALLRLCGIIRFISSISGTLDTRFDSKNWPISVDRSCRSIAVCVC

KAF9863236.1 hypothetical protein H0E87_013865 [Populus deltoides]2.5e-1340.28Show/hide
Query:  IFASFAALMFNCVRKEDIDYSPYEEGEWSIELETSIEVQRKVFKFQIEFTKGALNLAGGLIRCGLVPGLFFLVATEAMVSCCAHSPVANALDICLLKVEA
        IFAS AALMFNCVRKEDIDYSPYEEGEWS+                                        F V + AM+S     P           +EA
Subjt:  IFASFAALMFNCVRKEDIDYSPYEEGEWSIELETSIEVQRKVFKFQIEFTKGALNLAGGLIRCGLVPGLFFLVATEAMVSCCAHSPVANALDICLLKVEA

Query:  LALLRLCGIIRFISSISGTLDTRFDSKNWPISVDRSCRSIAVCV
        LA L +C ++   SSISG +D+RF+ +N   SVDR+C   AVCV
Subjt:  LALLRLCGIIRFISSISGTLDTRFDSKNWPISVDRSCRSIAVCV

KVH99310.1 Uncharacterized protein family UPF0220 [Cynara cardunculus var. scolymus]1.1e-1350Show/hide
Query:  SNRNRKEKARGRIHPWIWRSCGQFSAQVSPELCSVPDGGSGLTPLSAVLLPYPSSTTSQVLYSCFALYS--FTSIFASFAALMFNCVRKEDIDYSPYEEG
        S   R    R  I+PWI+ +CG++S Q  P     P GG G T   AVLL    ST    L+  F  Y      IFAS AALMFNCVR+EDIDYSPYEEG
Subjt:  SNRNRKEKARGRIHPWIWRSCGQFSAQVSPELCSVPDGGSGLTPLSAVLLPYPSSTTSQVLYSCFALYS--FTSIFASFAALMFNCVRKEDIDYSPYEEG

Query:  EWSIEL
        EW ++L
Subjt:  EWSIEL

TrEMBL top hitse value%identityAlignment
A0A124SE86 Uncharacterized protein family UPF02205.5e-1450Show/hide
Query:  SNRNRKEKARGRIHPWIWRSCGQFSAQVSPELCSVPDGGSGLTPLSAVLLPYPSSTTSQVLYSCFALYS--FTSIFASFAALMFNCVRKEDIDYSPYEEG
        S   R    R  I+PWI+ +CG++S Q  P     P GG G T   AVLL    ST    L+  F  Y      IFAS AALMFNCVR+EDIDYSPYEEG
Subjt:  SNRNRKEKARGRIHPWIWRSCGQFSAQVSPELCSVPDGGSGLTPLSAVLLPYPSSTTSQVLYSCFALYS--FTSIFASFAALMFNCVRKEDIDYSPYEEG

Query:  EWSIEL
        EW ++L
Subjt:  EWSIEL

A0A4Y7J3R4 Uncharacterized protein1.0e-1238.46Show/hide
Query:  IFASFAALMFNCVRKEDIDYSPYEEGEWSIELETSIEVQRKVFKFQIEFTKGALNLAGGLIRCGLVPGLFFLVATEAMVSCCAHSPVANALDICLLKVEA
        IFASFAALMFNCVRKEDIDYSPYEEGEW   +  S +++   +   ++F                +P  FF  A+++ +  C    +   +    +++EA
Subjt:  IFASFAALMFNCVRKEDIDYSPYEEGEWSIELETSIEVQRKVFKFQIEFTKGALNLAGGLIRCGLVPGLFFLVATEAMVSCCAHSPVANALDICLLKVEA

Query:  LALLRLCGIIRFISSISGTLDTRFDSKNWPISVDRSCRSIAVC
        LALL +   +R   SI  ++DTR    NWP+ +DR    +AVC
Subjt:  LALLRLCGIIRFISSISGTLDTRFDSKNWPISVDRSCRSIAVC

A0A5D3DS24 Retrotransposable element Tf26.8e-1288.89Show/hide
Query:  LKVEALALLRLCGIIRFISSISGTLDTRFDSKNWPISVDRSCRSI
        L VEALALLRLCGIIRFISSISG+LDTRF SKNW ISVDRSCRS+
Subjt:  LKVEALALLRLCGIIRFISSISGTLDTRFDSKNWPISVDRSCRSI

A0A5N6REP4 Uncharacterized protein2.2e-1540.14Show/hide
Query:  IFASFAALMFNCVRKEDIDYSPYEEGEWSIELETSIEVQRKVFKFQIEFTKGALNLAGGLIRCGLVPGLFFLVATEAMVSCCAHSPVANALDICLLKVEA
        IFASFAALMFNCVRKEDIDYSPYEEGEW                                 R G                           ++ L  +EA
Subjt:  IFASFAALMFNCVRKEDIDYSPYEEGEWSIELETSIEVQRKVFKFQIEFTKGALNLAGGLIRCGLVPGLFFLVATEAMVSCCAHSPVANALDICLLKVEA

Query:  LALLRLCGIIRFISSISGTLDTRFDSKNWPISVDRSCRSIAVCVCVG
        LA LRLC ++   S ISG++DT F   NWP  VD +CR +AVCV VG
Subjt:  LALLRLCGIIRFISSISGTLDTRFDSKNWPISVDRSCRSIAVCVCVG

A0A7J6E3E0 Uncharacterized protein6.5e-1539.07Show/hide
Query:  LYSFTSIFASFAALMFNCVRKEDIDYSPYEEGEWSIELETSIEVQRKVFKFQIEFTKGALNLAGGLIRCGLVPGLFFLVATEAMVSCCAHSPVANALDIC
        L+    IFAS AALMFNCVRKEDIDYSPYEEGEW            + +   +E   G                   LV  +            N     
Subjt:  LYSFTSIFASFAALMFNCVRKEDIDYSPYEEGEWSIELETSIEVQRKVFKFQIEFTKGALNLAGGLIRCGLVPGLFFLVATEAMVSCCAHSPVANALDIC

Query:  LLKVEALALLRLCGIIRFISSISGTLDTRFDSKNWPISVDRSCRSIAVCVC
          +VEALA+L +C ++ F    SG+ DTRF S+NWP S+DR+   +AVCVC
Subjt:  LLKVEALALLRLCGIIRFISSISGTLDTRFDSKNWPISVDRSCRSIAVCVC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G36980.1 unknown protein2.4e-0981.25Show/hide
Query:  IFASFAALMFNCVRKEDIDYSPYEEGEWSIEL
        IFAS  ALMFNCVRKEDIDYSPY+EGEW ++L
Subjt:  IFASFAALMFNCVRKEDIDYSPYEEGEWSIEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCAAAAGGTCGGGCCAAGGTTGGAGGGACGGGGCCTTGGCCCGACCCCTGCTCGGGCTCGGCCTTGGGTTGAGGTCGAGGCCCCTGGTCGGCCTCGGCCATGGGC
CGAGGTCTTCCGTCTCTGTTTGGTTCGAGATGCCCCGATTCCACCATCGGCTGCGGTGTGGCAAGCACCACATCGGTGTGCATGTTTTACTGTCTTGCAAGTCACGTCTT
CCCCCTCTCATGCAAATTTATTGTTGGTGGCACGTGAAGGTCAGGTGAGTTCCTCTTGTCCAGATTTGGCACGTGAAGGTCAGGAAAGAGGTCTGAGCTGTGCGATCAAT
CAGTTCACACTAGCCTCTCCAAATCGACCCGTCTCGAACCGCAATCGTAAGGAGAAGGCAAGAGGAAGAATCCACCCATGGATTTGGCGGAGCTGTGGTCAATTTTCGGC
CCAGGTGTCGCCGGAGCTGTGTTCGGTGCCGGATGGTGGTTCTGGGTTGACGCCGTTGTCTGCAGTTCTGTTGCCGTATCCTTCGTCCACTACCTCCCAGGTTCTCTATT
CTTGCTTCGCTCTTTATTCATTTACCAGTATTTTTGCTTCTTTTGCGGCTCTGATGTTCAATTGCGTTCGGAAAGAAGACATCGATTATTCTCCATACGAGGAAGGCGAA
TGGAGTATTGAGCTTGAGACTTCTATCGAGGTACAAAGAAAAGTGTTCAAATTCCAAATAGAATTCACAAAAGGGGCTTTGAACTTAGCTGGAGGTTTGATAAGGTGCGG
ATTAGTACCTGGCCTTTTTTTCCTTGTGGCAACAGAAGCCATGGTTTCCTGCTGTGCGCACAGCCCAGTAGCAAATGCTCTGGATATCTGCTTATTAAAGGTTGAAGCTT
TGGCTCTTCTTCGCTTATGTGGTATCATTCGTTTCATTAGCAGCATCAGTGGGACTCTTGATACAAGATTCGATAGTAAAAACTGGCCCATCAGTGTGGACAGGAGTTGC
AGGAGTATTGCAGTGTGTGTTTGTGTTGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCCAAAAGGTCGGGCCAAGGTTGGAGGGACGGGGCCTTGGCCCGACCCCTGCTCGGGCTCGGCCTTGGGTTGAGGTCGAGGCCCCTGGTCGGCCTCGGCCATGGGC
CGAGGTCTTCCGTCTCTGTTTGGTTCGAGATGCCCCGATTCCACCATCGGCTGCGGTGTGGCAAGCACCACATCGGTGTGCATGTTTTACTGTCTTGCAAGTCACGTCTT
CCCCCTCTCATGCAAATTTATTGTTGGTGGCACGTGAAGGTCAGGTGAGTTCCTCTTGTCCAGATTTGGCACGTGAAGGTCAGGAAAGAGGTCTGAGCTGTGCGATCAAT
CAGTTCACACTAGCCTCTCCAAATCGACCCGTCTCGAACCGCAATCGTAAGGAGAAGGCAAGAGGAAGAATCCACCCATGGATTTGGCGGAGCTGTGGTCAATTTTCGGC
CCAGGTGTCGCCGGAGCTGTGTTCGGTGCCGGATGGTGGTTCTGGGTTGACGCCGTTGTCTGCAGTTCTGTTGCCGTATCCTTCGTCCACTACCTCCCAGGTTCTCTATT
CTTGCTTCGCTCTTTATTCATTTACCAGTATTTTTGCTTCTTTTGCGGCTCTGATGTTCAATTGCGTTCGGAAAGAAGACATCGATTATTCTCCATACGAGGAAGGCGAA
TGGAGTATTGAGCTTGAGACTTCTATCGAGGTACAAAGAAAAGTGTTCAAATTCCAAATAGAATTCACAAAAGGGGCTTTGAACTTAGCTGGAGGTTTGATAAGGTGCGG
ATTAGTACCTGGCCTTTTTTTCCTTGTGGCAACAGAAGCCATGGTTTCCTGCTGTGCGCACAGCCCAGTAGCAAATGCTCTGGATATCTGCTTATTAAAGGTTGAAGCTT
TGGCTCTTCTTCGCTTATGTGGTATCATTCGTTTCATTAGCAGCATCAGTGGGACTCTTGATACAAGATTCGATAGTAAAAACTGGCCCATCAGTGTGGACAGGAGTTGC
AGGAGTATTGCAGTGTGTGTTTGTGTTGGTTAG
Protein sequenceShow/hide protein sequence
MGQKVGPRLEGRGLGPTPARARPWVEVEAPGRPRPWAEVFRLCLVRDAPIPPSAAVWQAPHRCACFTVLQVTSSPSHANLLLVAREGQVSSSCPDLAREGQERGLSCAIN
QFTLASPNRPVSNRNRKEKARGRIHPWIWRSCGQFSAQVSPELCSVPDGGSGLTPLSAVLLPYPSSTTSQVLYSCFALYSFTSIFASFAALMFNCVRKEDIDYSPYEEGE
WSIELETSIEVQRKVFKFQIEFTKGALNLAGGLIRCGLVPGLFFLVATEAMVSCCAHSPVANALDICLLKVEALALLRLCGIIRFISSISGTLDTRFDSKNWPISVDRSC
RSIAVCVCVG