; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg008452 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008452
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionVQ domain-containing protein
Genome locationscaffold10:36133040..36133540
RNA-Seq ExpressionSpg008452
SyntenySpg008452
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR008889 - VQ
IPR039607 - VQ motif-containing protein 8/17/18/20/21/25


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578908.1 Protein MKS1, partial [Cucurbita argyrosperma subsp. sororia]8.8e-5271.26Show/hide
Query:  MAERKELQLQGPRPAALKITKDSHKIKKPPLPPPPHRPIIIYTVSPKIIHTDPTEFKDLVQRLTGRGPSSDGPQVPPETMSMSMSMPMSSSNTEGVDRVG
        MAERKELQLQGPRPAALKITKDSHKI K     PPHRP+IIYTVSPK+IHTDPT+FKDLVQRLTG  PSS     PP T        + S+N +G +RVG
Subjt:  MAERKELQLQGPRPAALKITKDSHKIKKPPLPPPPHRPIIIYTVSPKIIHTDPTEFKDLVQRLTGRGPSSDGPQVPPETMSMSMSMPMSSSNTEGVDRVG

Query:  HFPAGILSPTPGSLPPISPNIFTP-PPQMAAAADLSPLTHFFQDLSPIAPNNFPSSLDFFQNFPDFH
        H   GILSPTPG LPPI  NIFTP PPQ   +A+LSPLTHFF+DLSPIAPN F SSLDFFQNFPD H
Subjt:  HFPAGILSPTPGSLPPISPNIFTP-PPQMAAAADLSPLTHFFQDLSPIAPNNFPSSLDFFQNFPDFH

XP_022939148.1 protein MKS1-like [Cucurbita moschata]4.4e-5170.66Show/hide
Query:  MAERKELQLQGPRPAALKITKDSHKIKKPPLPPPPHRPIIIYTVSPKIIHTDPTEFKDLVQRLTGRGPSSDGPQVPPETMSMSMSMPMSSSNTEGVDRVG
        MAERKELQLQGPRPAALKITKDSHKI K     PPHRP+IIYTVSPK+IHTDPT+FKDLVQRLTG  PSS     PP T        + S+N +G +RVG
Subjt:  MAERKELQLQGPRPAALKITKDSHKIKKPPLPPPPHRPIIIYTVSPKIIHTDPTEFKDLVQRLTGRGPSSDGPQVPPETMSMSMSMPMSSSNTEGVDRVG

Query:  HFPAGILSPTPGSLPPISPNIFTP-PPQMAAAADLSPLTHFFQDLSPIAPNNFPSSLDFFQNFPDFH
        H   GILSPTPG LPPI  NIFTP PPQ   +A+LSPLTHFF+DLSPIAPN F  SLDFFQNFPD H
Subjt:  HFPAGILSPTPGSLPPISPNIFTP-PPQMAAAADLSPLTHFFQDLSPIAPNNFPSSLDFFQNFPDFH

XP_022993351.1 protein MKS1-like [Cucurbita maxima]3.7e-5069.46Show/hide
Query:  MAERKELQLQGPRPAALKITKDSHKIKKPPLPPPPHRPIIIYTVSPKIIHTDPTEFKDLVQRLTGRGPSSDGPQVPPETMSMSMSMPMSSSNTEGVDRVG
        MAERKE+QLQGPRPAALKITKDSHKI K     PPHRP+IIY+VSPK+IHTDPT+FKDLVQRLTG  PSS     PP T        + S+N  G +RVG
Subjt:  MAERKELQLQGPRPAALKITKDSHKIKKPPLPPPPHRPIIIYTVSPKIIHTDPTEFKDLVQRLTGRGPSSDGPQVPPETMSMSMSMPMSSSNTEGVDRVG

Query:  HFPAGILSPTPGSLPPISPNIFTP-PPQMAAAADLSPLTHFFQDLSPIAPNNFPSSLDFFQNFPDFH
        H   GILSPTPG LPPI  NIFTP PPQ   +A+LSPLTHFF+DLSPIAPN F  SLDFFQNFPD H
Subjt:  HFPAGILSPTPGSLPPISPNIFTP-PPQMAAAADLSPLTHFFQDLSPIAPNNFPSSLDFFQNFPDFH

XP_023551504.1 protein MKS1-like [Cucurbita pepo subsp. pepo]5.7e-5171.43Show/hide
Query:  MAERKELQLQGPRPAALKITKDSHKIKKPPLPPPPHRPIIIYTVSPKIIHTDPTEFKDLVQRLTGRGPSS-DGPQVPPETMSMSMSMPMSSSNTEGVDRV
        MAERKE+QLQGPRPAALKITKDSHKI K     PPHRP+IIYTVSPK+IHTDPT+FKDLVQRLTG  PSS D    P  TM M       S+N +G +RV
Subjt:  MAERKELQLQGPRPAALKITKDSHKIKKPPLPPPPHRPIIIYTVSPKIIHTDPTEFKDLVQRLTGRGPSS-DGPQVPPETMSMSMSMPMSSSNTEGVDRV

Query:  GHFPAGILSPTPGSLPPISPNIFTP-PPQMAAAADLSPLTHFFQDLSPIAPNNFPSSLDFFQNFPDFH
        GH   GILSPTPG LPPI  NIFTP PPQ   +A+LSPLTHFF+DLSPIAPN F SSLDFFQNFPD H
Subjt:  GHFPAGILSPTPGSLPPISPNIFTP-PPQMAAAADLSPLTHFFQDLSPIAPNNFPSSLDFFQNFPDFH

XP_038885910.1 protein MKS1-like [Benincasa hispida]3.2e-5472.99Show/hide
Query:  MAERKELQLQGPRPAALKITKDSHKIKKPPLP---PPPHRPIIIYTVSPKIIHTDPTEFKDLVQRLTGRGPSSDGPQVP-PETMSMSMSMPMSSSNTEGV
        M ERKE+ LQGPRPAALKITKDSHKIKKPPLP   PPPHRP+IIYTVSPKIIHT+PTEFKDLVQRLTG  PSS    +  P +MSMSM+   ++S  +GV
Subjt:  MAERKELQLQGPRPAALKITKDSHKIKKPPLP---PPPHRPIIIYTVSPKIIHTDPTEFKDLVQRLTGRGPSSDGPQVP-PETMSMSMSMPMSSSNTEGV

Query:  DRVGHFPAGILSPTPGSLPPISPNIFTPPPQ---MAAAADLSPLTHFFQDLSPIAPNNFPSSLDFF-QNFPDFH
        +RVGH   GILSPTPG LPPIS NIFTPPPQ    AAA D SP T FFQD SPIA N+F SSLDFF QNFPDFH
Subjt:  DRVGHFPAGILSPTPGSLPPISPNIFTPPPQ---MAAAADLSPLTHFFQDLSPIAPNNFPSSLDFF-QNFPDFH

TrEMBL top hitse value%identityAlignment
A0A0A0KI80 VQ domain-containing protein6.4e-4866.67Show/hide
Query:  MAERKELQLQGPRPAALKITKDSHKIKKPPLPPP-PHRPIIIYTVSPKIIHTDPTEFKDLVQRLTG--RGPSSDGPQV-------PPETMSMSMSMPMSS
        M E+KELQLQGPRP+ALKITKDSHKIKKPPLPPP PHRP+IIYTVSPKIIHTDPTEFKDLVQRLTG  + PSS            PP+ +S+  +     
Subjt:  MAERKELQLQGPRPAALKITKDSHKIKKPPLPPP-PHRPIIIYTVSPKIIHTDPTEFKDLVQRLTG--RGPSSDGPQV-------PPETMSMSMSMPMSS

Query:  SNTEGVDRVGHFPAGILSPTPGSLPPISPNIFTPPPQ---MAAAADLSPLTHFFQDLSPIAPNNFPSSLDFF-QNFPDFH
         +  GVDR+     GILSPTPG LPPIS  IF PPPQ    AAA DL+ LT FF DLSPIA N+F SSLDFF QNFPDFH
Subjt:  SNTEGVDRVGHFPAGILSPTPGSLPPISPNIFTPPPQ---MAAAADLSPLTHFFQDLSPIAPNNFPSSLDFF-QNFPDFH

A0A1S3B4N1 protein MKS1-like2.7e-4665.54Show/hide
Query:  ERKELQLQGPRPAALKITKDSHKIKKPPLPPP-PHRPIIIYTVSPKIIHTDPTEFKDLVQRLTG--RGPSSDGPQV------PPETMSMSMSMPMSSSNT
        ++++LQLQGPRP+ALKITKDSHKIKKPPLPPP PHRP+IIYTVSPKIIHTDPT+FKDLVQRLTG  + PSS           PP+ +S+ ++  +     
Subjt:  ERKELQLQGPRPAALKITKDSHKIKKPPLPPP-PHRPIIIYTVSPKIIHTDPTEFKDLVQRLTG--RGPSSDGPQV------PPETMSMSMSMPMSSSNT

Query:  EGVDRVGHFPAGILSPTPGSLPPISPNIF-TPPPQMAAAA--DLSPLTHFFQDLSPIAPNNFPSSLDFF-QNFPDFH
         GVDR+     GILSPTPG LPPISP IF TPPPQ AAAA  DL+ LT FF DLSPI  N+F  SLDFF QNFPDFH
Subjt:  EGVDRVGHFPAGILSPTPGSLPPISPNIF-TPPPQMAAAA--DLSPLTHFFQDLSPIAPNNFPSSLDFF-QNFPDFH

A0A5A7UZA1 Protein MKS1-like4.9e-4867.04Show/hide
Query:  MAERKELQLQGPRPAALKITKDSHKIKKPPLPPP-PHRPIIIYTVSPKIIHTDPTEFKDLVQRLTG--RGPSSDGPQV------PPETMSMSMSMPMSSS
        M E+KELQLQGPRP+ALKITKDSHKIKKPPLPPP PHRP+IIYTVSPKIIHTDPT+FKDLVQRLTG  + PSS           PP+ +S+ ++  +   
Subjt:  MAERKELQLQGPRPAALKITKDSHKIKKPPLPPP-PHRPIIIYTVSPKIIHTDPTEFKDLVQRLTG--RGPSSDGPQV------PPETMSMSMSMPMSSS

Query:  NTEGVDRVGHFPAGILSPTPGSLPPISPNIF-TPPPQMAAAA--DLSPLTHFFQDLSPIAPNNFPSSLDFF-QNFPDFH
           GVDR+     GILSPTPG LPPISP IF TPPPQ AAAA  DL+ LT FF DLSPI  N+F  SLDFF QNFPDFH
Subjt:  NTEGVDRVGHFPAGILSPTPGSLPPISPNIF-TPPPQMAAAA--DLSPLTHFFQDLSPIAPNNFPSSLDFF-QNFPDFH

A0A6J1FKV1 protein MKS1-like2.1e-5170.66Show/hide
Query:  MAERKELQLQGPRPAALKITKDSHKIKKPPLPPPPHRPIIIYTVSPKIIHTDPTEFKDLVQRLTGRGPSSDGPQVPPETMSMSMSMPMSSSNTEGVDRVG
        MAERKELQLQGPRPAALKITKDSHKI K     PPHRP+IIYTVSPK+IHTDPT+FKDLVQRLTG  PSS     PP T        + S+N +G +RVG
Subjt:  MAERKELQLQGPRPAALKITKDSHKIKKPPLPPPPHRPIIIYTVSPKIIHTDPTEFKDLVQRLTGRGPSSDGPQVPPETMSMSMSMPMSSSNTEGVDRVG

Query:  HFPAGILSPTPGSLPPISPNIFTP-PPQMAAAADLSPLTHFFQDLSPIAPNNFPSSLDFFQNFPDFH
        H   GILSPTPG LPPI  NIFTP PPQ   +A+LSPLTHFF+DLSPIAPN F  SLDFFQNFPD H
Subjt:  HFPAGILSPTPGSLPPISPNIFTP-PPQMAAAADLSPLTHFFQDLSPIAPNNFPSSLDFFQNFPDFH

A0A6J1JW33 protein MKS1-like1.8e-5069.46Show/hide
Query:  MAERKELQLQGPRPAALKITKDSHKIKKPPLPPPPHRPIIIYTVSPKIIHTDPTEFKDLVQRLTGRGPSSDGPQVPPETMSMSMSMPMSSSNTEGVDRVG
        MAERKE+QLQGPRPAALKITKDSHKI K     PPHRP+IIY+VSPK+IHTDPT+FKDLVQRLTG  PSS     PP T        + S+N  G +RVG
Subjt:  MAERKELQLQGPRPAALKITKDSHKIKKPPLPPPPHRPIIIYTVSPKIIHTDPTEFKDLVQRLTGRGPSSDGPQVPPETMSMSMSMPMSSSNTEGVDRVG

Query:  HFPAGILSPTPGSLPPISPNIFTP-PPQMAAAADLSPLTHFFQDLSPIAPNNFPSSLDFFQNFPDFH
        H   GILSPTPG LPPI  NIFTP PPQ   +A+LSPLTHFF+DLSPIAPN F  SLDFFQNFPD H
Subjt:  HFPAGILSPTPGSLPPISPNIFTP-PPQMAAAADLSPLTHFFQDLSPIAPNNFPSSLDFFQNFPDFH

SwissProt top hitse value%identityAlignment
F4HWF9 Nuclear speckle RNA-binding protein B1.7e-1032.78Show/hide
Query:  GPRPAALKITKDSHK-IKKPPLPP-------------------PPHRPIIIYTVSPKIIHTDPTEFKDLVQRLTGR-------GPSSDGPQVPPETMSM-
        GP+P  LK+  DSHK IKKPPL P                   PP  P+ IYTV+P+IIHT P  F  LVQRLTG+         SS     P +T +M 
Subjt:  GPRPAALKITKDSHK-IKKPPLPP-------------------PPHRPIIIYTVSPKIIHTDPTEFKDLVQRLTGR-------GPSSDGPQVPPETMSM-

Query:  -------------SMSMPMSSSN--------------------------TEGVDRVGHFPAGILSPTPGSLPPISPNIFT
                     +++   + SN                            G +R     AGILSP P SLP +SP+ F+
Subjt:  -------------SMSMPMSSSN--------------------------TEGVDRVGHFPAGILSPTPGSLPPISPNIFT

Q8LGD5 Protein MKS13.1e-1536.77Show/hide
Query:  ERKELQLQGPRPAALKITKDSHKIKKP---PLPPP---------PHRPIIIYTVSPKIIHTDPTEFKDLVQRLTGRG-----PSSDGPQVPP--------
        ++++LQ+ GPRP+ L + KDSHKIKKP   P PPP         P  P++IY VSPK++H   +EF ++VQRLTG        S  G  V P        
Subjt:  ERKELQLQGPRPAALKITKDSHKIKKP---PLPPP---------PHRPIIIYTVSPKIIHTDPTEFKDLVQRLTGRG-----PSSDGPQVPP--------

Query:  --------ETMSMSMSMPMSSSNTEGVDRVGHFPAGILSPTPGSLPPISPNIFTP
                E  +   ++ ++++  E  +  G+ P GILSP+P  LP  S  IF+P
Subjt:  --------ETMSMSMSMPMSSSNTEGVDRVGHFPAGILSPTPGSLPPISPNIFTP

Q9CA36 VQ motif-containing protein 8, chloroplastic9.9e-0637.25Show/hide
Query:  QLQGPRPAALKITKDSHKIKKP---PLPPPPH---RPIIIYTVSPKIIHTDPTEFKDLVQRLTG------RGPSSDGPQVPPETMSM---SMSMPMSSSN
        ++ G RP++LK+  +SH IKK       P PH    P+IIY  SPK+IHT   +F  LVQRLTG      R  S     V  E +++   + + P S   
Subjt:  QLQGPRPAALKITKDSHKIKKP---PLPPPPH---RPIIIYTVSPKIIHTDPTEFKDLVQRLTG------RGPSSDGPQVPPETMSM---SMSMPMSSSN

Query:  TE
        T+
Subjt:  TE

Q9LS54 VQ motif-containing protein 201.1e-0951.52Show/hide
Query:  PRPAALKITKDSHKIKKPPLP------PPPHRPIIIYTVSPKIIHTDPTEFKDLVQRLTGRGPSSD
        P P  LK+ KDSH IKKPP P        P  P+IIYT +P+IIHT+P +F  LVQ+LTG   S +
Subjt:  PRPAALKITKDSHKIKKPPLP------PPPHRPIIIYTVSPKIIHTDPTEFKDLVQRLTGRGPSSD

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding1.2e-1132.78Show/hide
Query:  GPRPAALKITKDSHK-IKKPPLPP-------------------PPHRPIIIYTVSPKIIHTDPTEFKDLVQRLTGR-------GPSSDGPQVPPETMSM-
        GP+P  LK+  DSHK IKKPPL P                   PP  P+ IYTV+P+IIHT P  F  LVQRLTG+         SS     P +T +M 
Subjt:  GPRPAALKITKDSHK-IKKPPLPP-------------------PPHRPIIIYTVSPKIIHTDPTEFKDLVQRLTGR-------GPSSDGPQVPPETMSM-

Query:  -------------SMSMPMSSSN--------------------------TEGVDRVGHFPAGILSPTPGSLPPISPNIFT
                     +++   + SN                            G +R     AGILSP P SLP +SP+ F+
Subjt:  -------------SMSMPMSSSN--------------------------TEGVDRVGHFPAGILSPTPGSLPPISPNIFT

AT1G21326.1 VQ motif-containing protein1.1e-1531.62Show/hide
Query:  GPRPAALKITKDSHK-IKKPPLPP-------------------PPHRPIIIYTVSPKIIHTDPTEFKDLVQRLTGRGPSSDGPQVPPETMSMSMSMPMSS
        GPRP  LK+  DSHK IKKPPL P                   PP  P+IIYTVSP+IIHT P  F  LVQRLTG+  +S        + S S S P  +
Subjt:  GPRPAALKITKDSHK-IKKPPLPP-------------------PPHRPIIIYTVSPKIIHTDPTEFKDLVQRLTGRGPSSDGPQVPPETMSMSMSMPMSS

Query:  S-------------------------------------------------------NTEGVDRVGHFPAGILSPTPGSLPPISPNIFTPPPQMAAAADLS
        S                                                         +G +R     AGILSP P SLP +SP+ F+         D  
Subjt:  S-------------------------------------------------------NTEGVDRVGHFPAGILSPTPGSLPPISPNIFTPPPQMAAAADLS

Query:  PLTHFFQDLSPIAPNN-----FPSSLDFFQNFPD
          + FF D + I  ++      PSS+D F NF D
Subjt:  PLTHFFQDLSPIAPNN-----FPSSLDFFQNFPD

AT1G68450.1 VQ motif-containing protein7.0e-0737.25Show/hide
Query:  QLQGPRPAALKITKDSHKIKKP---PLPPPPH---RPIIIYTVSPKIIHTDPTEFKDLVQRLTG------RGPSSDGPQVPPETMSM---SMSMPMSSSN
        ++ G RP++LK+  +SH IKK       P PH    P+IIY  SPK+IHT   +F  LVQRLTG      R  S     V  E +++   + + P S   
Subjt:  QLQGPRPAALKITKDSHKIKKP---PLPPPPH---RPIIIYTVSPKIIHTDPTEFKDLVQRLTG------RGPSSDGPQVPPETMSM---SMSMPMSSSN

Query:  TE
        T+
Subjt:  TE

AT3G18360.1 VQ motif-containing protein8.0e-1151.52Show/hide
Query:  PRPAALKITKDSHKIKKPPLP------PPPHRPIIIYTVSPKIIHTDPTEFKDLVQRLTGRGPSSD
        P P  LK+ KDSH IKKPP P        P  P+IIYT +P+IIHT+P +F  LVQ+LTG   S +
Subjt:  PRPAALKITKDSHKIKKPPLP------PPPHRPIIIYTVSPKIIHTDPTEFKDLVQRLTGRGPSSD

AT3G18690.1 MAP kinase substrate 12.2e-1636.77Show/hide
Query:  ERKELQLQGPRPAALKITKDSHKIKKP---PLPPP---------PHRPIIIYTVSPKIIHTDPTEFKDLVQRLTGRG-----PSSDGPQVPP--------
        ++++LQ+ GPRP+ L + KDSHKIKKP   P PPP         P  P++IY VSPK++H   +EF ++VQRLTG        S  G  V P        
Subjt:  ERKELQLQGPRPAALKITKDSHKIKKP---PLPPP---------PHRPIIIYTVSPKIIHTDPTEFKDLVQRLTGRG-----PSSDGPQVPP--------

Query:  --------ETMSMSMSMPMSSSNTEGVDRVGHFPAGILSPTPGSLPPISPNIFTP
                E  +   ++ ++++  E  +  G+ P GILSP+P  LP  S  IF+P
Subjt:  --------ETMSMSMSMPMSSSNTEGVDRVGHFPAGILSPTPGSLPPISPNIFTP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAAAGAAAAGAGCTTCAACTCCAAGGCCCCCGCCCCGCCGCCCTCAAGATCACCAAAGACTCCCACAAGATCAAAAAGCCGCCCCTCCCGCCGCCGCCACACCG
CCCCATCATCATCTACACCGTCTCCCCCAAGATCATCCACACCGATCCGACCGAGTTCAAGGACTTGGTCCAACGTCTCACCGGACGCGGACCCTCCTCTGATGGTCCTC
AAGTCCCACCAGAGACTATGTCGATGTCGATGTCGATGCCGATGAGTAGTAGTAATACAGAAGGAGTGGATAGAGTGGGTCATTTCCCAGCAGGGATATTATCGCCGACG
CCGGGGTCGTTACCGCCGATTTCGCCGAATATTTTCACTCCGCCGCCACAGATGGCGGCTGCAGCTGATCTCAGCCCTCTTACCCACTTCTTCCAAGACCTTAGCCCCAT
AGCTCCCAATAACTTCCCATCGTCGCTAGATTTCTTCCAAAACTTCCCTGATTTCCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAAAGAAAAGAGCTTCAACTCCAAGGCCCCCGCCCCGCCGCCCTCAAGATCACCAAAGACTCCCACAAGATCAAAAAGCCGCCCCTCCCGCCGCCGCCACACCG
CCCCATCATCATCTACACCGTCTCCCCCAAGATCATCCACACCGATCCGACCGAGTTCAAGGACTTGGTCCAACGTCTCACCGGACGCGGACCCTCCTCTGATGGTCCTC
AAGTCCCACCAGAGACTATGTCGATGTCGATGTCGATGCCGATGAGTAGTAGTAATACAGAAGGAGTGGATAGAGTGGGTCATTTCCCAGCAGGGATATTATCGCCGACG
CCGGGGTCGTTACCGCCGATTTCGCCGAATATTTTCACTCCGCCGCCACAGATGGCGGCTGCAGCTGATCTCAGCCCTCTTACCCACTTCTTCCAAGACCTTAGCCCCAT
AGCTCCCAATAACTTCCCATCGTCGCTAGATTTCTTCCAAAACTTCCCTGATTTCCATTAA
Protein sequenceShow/hide protein sequence
MAERKELQLQGPRPAALKITKDSHKIKKPPLPPPPHRPIIIYTVSPKIIHTDPTEFKDLVQRLTGRGPSSDGPQVPPETMSMSMSMPMSSSNTEGVDRVGHFPAGILSPT
PGSLPPISPNIFTPPPQMAAAADLSPLTHFFQDLSPIAPNNFPSSLDFFQNFPDFH