CuGenDBv2

Gene ID	Spg008492
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	mediator of RNA polymerase II transcription subunit 23 isoform X1
Genome location	scaffold10:37588733..37600724
RNA-Seq Expression	Spg008492
Synteny	Spg008492
Gene Ontology terms	GO:0005634 - nucleus (cellular component)
InterPro domains	IPR021629 - Mediator complex, subunit Med23

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7016782.1 Mediator of RNA polymerase II transcription subunit 23 [Cucurbita argyrosperma subsp. argyrosperma]

0.0e+00

89.3

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Query:  DRERFLRNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAE
        D  R   NKAQKRV AINRELPPRNEQFLLDFEQIQNQFAD+DQL AVTESVLISLVVQCSGHVPRAEF+LFALRSLCSIGYINWDTFLPSLLSS+SSAE
Subjt:  DRERFLRNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAE

Query:  VSVGQGSQAAP-TVSSTNLSQSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLR
        VS+GQGSQAAP TVS+TNLSQSGVLPSSNPVPN+STFQSSNPASPLPSVHGISSPAQSS+DP+SCT LSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLR
Subjt:  VSVGQGSQAAP-TVSSTNLSQSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLR

Query:  QLCCKIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYL
        QLCCKIILSGLKF+LKP THADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEE+KCRVPFYELLRSGLQFIDNIPDDE L
Subjt:  QLCCKIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYL

Query:  FTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPD
        FTLILEIHRRRDMMAMHMQMLDQHLH PTFGTQRIFSQTMQNISGE VAS R+SPITYPSVLGEPLHGE+IAS IQRGTRDWERAMRCIRHALRTTPSP+
Subjt:  FTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPD

Query:  WWKRVLLVAPCYRSPAQGPTPGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEWLVFSDIFFFLMKSGCID
        WWKRVLLVAP YRSPAQG +PGAVFTSEMICEATIDRIFELLKLTNS                            +IHCWQEWLVFSDIF+FLMKSGCID
Subjt:  WWKRVLLVAPCYRSPAQGPTPGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEWLVFSDIFFFLMKSGCID

Query:  FADFVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNE
        FADFVAKL+SRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKS DPNNPQSILL+FISSCQNLRIWSLNT TREYLNNE
Subjt:  FADFVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNE

Query:  QLQKGKQIDEWWRQASK
        QLQKGKQIDEWWRQA K
Subjt:  QLQKGKQIDEWWRQASK

XP_008467111.1 PREDICTED: mediator of RNA polymerase II transcription subunit 23 isoform X1 [Cucumis melo]

0.0e+00

89.77

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Query:  DRERFLRNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAE
        D  R   NKAQKRV AINRELPPRNEQFLLDFEQIQNQF+DHDQLRAVTESVLISLVVQCSGHVPRAEF+LFALRSLCSI YINWDTFLPSLLSS+SSAE
Subjt:  DRERFLRNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAE

Query:  VSVGQGSQAAPTVSSTNLSQSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQ
        VS+GQGSQAAPTVS+TNLSQSGVLPSSNPVPN+STFQSSNPASPLPSVHGISSPAQSS+DPSSCT LSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQ
Subjt:  VSVGQGSQAAPTVSSTNLSQSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQ

Query:  LCCKIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYLF
        LCCKIILSGLKF+LKP THADIFSHMLNWMVNWDQRQQG+EESENMKSWRPDKALIEWLHSCLDVVWLLVEE+KCRVPFYELLRSGLQFIDNIPDDE LF
Subjt:  LCCKIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYLF

Query:  TLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPDW
        TLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGE VASLRYSPITYPSVLGEPLHGE+IAS IQRGTRDWERAMRCIRHALRTTPSPDW
Subjt:  TLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPDW

Query:  WKRVLLVAPCYRSPAQGPTPGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEWLVFSDIFFFLMKSGCIDF
        WKRVLLVAP YRS AQG +PGAVFTSEMICEATIDRIFELLKLTNS                            +IHCWQEWLVFSDIFFFLMKSGCIDF
Subjt:  WKRVLLVAPCYRSPAQGPTPGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEWLVFSDIFFFLMKSGCIDF

Query:  ADFVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNEQ
        ADFVAKL+SRVTEGG HVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKI+SFHREDK+ DPNNPQSILL+FISSCQNLRIWSLNTTTREYLN+EQ
Subjt:  ADFVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNEQ

Query:  LQKGKQIDEWWRQASK
        LQKGKQIDEWWRQASK
Subjt:  LQKGKQIDEWWRQASK

XP_016898808.1 PREDICTED: mediator of RNA polymerase II transcription subunit 23 isoform X2 [Cucumis melo]

0.0e+00

90.49

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Query:  RNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEVSVGQG
        RNKAQKRV AINRELPPRNEQFLLDFEQIQNQF+DHDQLRAVTESVLISLVVQCSGHVPRAEF+LFALRSLCSI YINWDTFLPSLLSS+SSAEVS+GQG
Subjt:  RNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEVSVGQG

Query:  SQAAPTVSSTNLSQSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKII
        SQAAPTVS+TNLSQSGVLPSSNPVPN+STFQSSNPASPLPSVHGISSPAQSS+DPSSCT LSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKII
Subjt:  SQAAPTVSSTNLSQSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKII

Query:  LSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYLFTLILEI
        LSGLKF+LKP THADIFSHMLNWMVNWDQRQQG+EESENMKSWRPDKALIEWLHSCLDVVWLLVEE+KCRVPFYELLRSGLQFIDNIPDDE LFTLILEI
Subjt:  LSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYLFTLILEI

Query:  HRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLL
        HRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGE VASLRYSPITYPSVLGEPLHGE+IAS IQRGTRDWERAMRCIRHALRTTPSPDWWKRVLL
Subjt:  HRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLL

Query:  VAPCYRSPAQGPTPGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEWLVFSDIFFFLMKSGCIDFADFVAK
        VAP YRS AQG +PGAVFTSEMICEATIDRIFELLKLTNS                            +IHCWQEWLVFSDIFFFLMKSGCIDFADFVAK
Subjt:  VAPCYRSPAQGPTPGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEWLVFSDIFFFLMKSGCIDFADFVAK

Query:  LYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNEQLQKGKQ
        L+SRVTEGG HVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKI+SFHREDK+ DPNNPQSILL+FISSCQNLRIWSLNTTTREYLN+EQLQKGKQ
Subjt:  LYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNEQLQKGKQ

Query:  IDEWWRQASK
        IDEWWRQASK
Subjt:  IDEWWRQASK

XP_022973546.1 mediator of RNA polymerase II transcription subunit 23 [Cucurbita maxima]

0.0e+00

89.3

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Query:  DRERFLRNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAE
        D  R   NKAQKRV AINRELPPRNEQFLLDFEQIQNQFAD+DQL AVTESVLISLVVQCSGHVPRAEF+LFALRSLCSIGYINWDTFLPSLLSS+SSAE
Subjt:  DRERFLRNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAE

Query:  VSVGQGSQAAP-TVSSTNLSQSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLR
        VS+GQGSQAAP TVS+TNLSQSGVLPSSNPVPN+STFQSSNPASPLPS+HGISSPAQSS+DP+SCT LSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLR
Subjt:  VSVGQGSQAAP-TVSSTNLSQSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLR

Query:  QLCCKIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYL
        QLCCKIILSGLKF+LKP T ADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEE+KCRVPFYELLRSGLQFIDNIPDDE L
Subjt:  QLCCKIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYL

Query:  FTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPD
        FTLILEIHRRRDMMAMHMQMLDQHLH PTFGTQRIFSQTMQNISGE VAS R+SPITYPSVLGEPLHGE+IAS IQRGTRDWERAMRCIRHALRTTPSP+
Subjt:  FTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPD

Query:  WWKRVLLVAPCYRSPAQGPTPGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEWLVFSDIFFFLMKSGCID
        WWKRVLLVAP YRSPAQG +PGAVFTSEMICEATIDRIFELLKLTNS                            +IHCWQEWLVFSDIF+FLMKSGCID
Subjt:  WWKRVLLVAPCYRSPAQGPTPGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEWLVFSDIFFFLMKSGCID

Query:  FADFVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNE
        FADFVAKL+SRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKS DPNNPQSILL+FISSCQNLRIWSLNTTTREYLNNE
Subjt:  FADFVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNE

Query:  QLQKGKQIDEWWRQASK
        QLQKGKQIDEWWRQASK
Subjt:  QLQKGKQIDEWWRQASK

XP_038875594.1 mediator of RNA polymerase II transcription subunit 23 [Benincasa hispida]

0.0e+00

90.26

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Query:  DRERFLRNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAE
        D  R   NKAQKRV AINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRAEF+LFALRSLCSIGYINWDTFLPSLLSSVSSAE
Subjt:  DRERFLRNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAE

Query:  VSVGQGSQAAPTVSSTNLSQSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQ
        VSVGQGSQAA TVS+TNLSQSGVLPSSNPVPN+STFQSSNPASP PSVHGISSPAQSS+DPSSCT LSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQ
Subjt:  VSVGQGSQAAPTVSSTNLSQSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQ

Query:  LCCKIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYLF
        LCCKIILSGLKF+LKP THADIFSHMLNWMVNWDQRQQG+EESENMKSWRPDKALIEWLHSCLDVVWLLVEE+KCRVPFYELLRSGLQFIDNIPDDE LF
Subjt:  LCCKIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYLF

Query:  TLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPDW
        TLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGE VASLRYSPITYPSVLGEPLHGE+IAS IQRGTRDWERAMRCIRHALRTTPSPDW
Subjt:  TLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPDW

Query:  WKRVLLVAPCYRSPAQGPTPGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEWLVFSDIFFFLMKSGCIDF
        WKRVLLVAP YRSPAQG +PGAVFTSEMICEATIDRIFELLKLTNS                            +IHCWQEWLVFSDIFFFLMKSGCIDF
Subjt:  WKRVLLVAPCYRSPAQGPTPGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEWLVFSDIFFFLMKSGCIDF

Query:  ADFVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNEQ
        ADFVAKL+SRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKI+SFHREDKS DPNNPQSILL+FISSCQNLR+WSLNTTTREYLN+EQ
Subjt:  ADFVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNEQ

Query:  LQKGKQIDEWWRQASK
        LQKGKQIDEWWR ASK
Subjt:  LQKGKQIDEWWRQASK

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CSR7 mediator of RNA polymerase II transcription subunit 23 isoform X1

0.0e+00

89.77

Show/hide

Query:  DRERFLRNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAE
        D  R   NKAQKRV AINRELPPRNEQFLLDFEQIQNQF+DHDQLRAVTESVLISLVVQCSGHVPRAEF+LFALRSLCSI YINWDTFLPSLLSS+SSAE
Subjt:  DRERFLRNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAE

Query:  VSVGQGSQAAPTVSSTNLSQSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQ
        VS+GQGSQAAPTVS+TNLSQSGVLPSSNPVPN+STFQSSNPASPLPSVHGISSPAQSS+DPSSCT LSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQ
Subjt:  VSVGQGSQAAPTVSSTNLSQSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQ

Query:  LCCKIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYLF
        LCCKIILSGLKF+LKP THADIFSHMLNWMVNWDQRQQG+EESENMKSWRPDKALIEWLHSCLDVVWLLVEE+KCRVPFYELLRSGLQFIDNIPDDE LF
Subjt:  LCCKIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYLF

Query:  TLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPDW
        TLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGE VASLRYSPITYPSVLGEPLHGE+IAS IQRGTRDWERAMRCIRHALRTTPSPDW
Subjt:  TLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPDW

Query:  WKRVLLVAPCYRSPAQGPTPGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEWLVFSDIFFFLMKSGCIDF
        WKRVLLVAP YRS AQG +PGAVFTSEMICEATIDRIFELLKLTNS                            +IHCWQEWLVFSDIFFFLMKSGCIDF
Subjt:  WKRVLLVAPCYRSPAQGPTPGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEWLVFSDIFFFLMKSGCIDF

Query:  ADFVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNEQ
        ADFVAKL+SRVTEGG HVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKI+SFHREDK+ DPNNPQSILL+FISSCQNLRIWSLNTTTREYLN+EQ
Subjt:  ADFVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNEQ

Query:  LQKGKQIDEWWRQASK
        LQKGKQIDEWWRQASK
Subjt:  LQKGKQIDEWWRQASK

A0A1S4DS63 mediator of RNA polymerase II transcription subunit 23 isoform X2

0.0e+00

90.49

Show/hide

Query:  RNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEVSVGQG
        RNKAQKRV AINRELPPRNEQFLLDFEQIQNQF+DHDQLRAVTESVLISLVVQCSGHVPRAEF+LFALRSLCSI YINWDTFLPSLLSS+SSAEVS+GQG
Subjt:  RNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEVSVGQG

Query:  SQAAPTVSSTNLSQSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKII
        SQAAPTVS+TNLSQSGVLPSSNPVPN+STFQSSNPASPLPSVHGISSPAQSS+DPSSCT LSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKII
Subjt:  SQAAPTVSSTNLSQSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKII

Query:  LSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYLFTLILEI
        LSGLKF+LKP THADIFSHMLNWMVNWDQRQQG+EESENMKSWRPDKALIEWLHSCLDVVWLLVEE+KCRVPFYELLRSGLQFIDNIPDDE LFTLILEI
Subjt:  LSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYLFTLILEI

Query:  HRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLL
        HRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGE VASLRYSPITYPSVLGEPLHGE+IAS IQRGTRDWERAMRCIRHALRTTPSPDWWKRVLL
Subjt:  HRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLL

Query:  VAPCYRSPAQGPTPGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEWLVFSDIFFFLMKSGCIDFADFVAK
        VAP YRS AQG +PGAVFTSEMICEATIDRIFELLKLTNS                            +IHCWQEWLVFSDIFFFLMKSGCIDFADFVAK
Subjt:  VAPCYRSPAQGPTPGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEWLVFSDIFFFLMKSGCIDFADFVAK

Query:  LYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNEQLQKGKQ
        L+SRVTEGG HVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKI+SFHREDK+ DPNNPQSILL+FISSCQNLRIWSLNTTTREYLN+EQLQKGKQ
Subjt:  LYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNEQLQKGKQ

Query:  IDEWWRQASK
        IDEWWRQASK
Subjt:  IDEWWRQASK

A0A5A7TSF1 Mediator of RNA polymerase II transcription subunit 23 isoform X1

0.0e+00

89.77

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Query:  DRERFLRNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAE
        D  R   NKAQKRV AINRELPPRNEQFLLDFEQIQNQF+DHDQLRAVTESVLISLVVQCSGHVPRAEF+LFALRSLCSI YINWDTFLPSLLSS+SSAE
Subjt:  DRERFLRNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAE

Query:  VSVGQGSQAAPTVSSTNLSQSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQ
        VS+GQGSQAAPTVS+TNLSQSGVLPSSNPVPN+STFQSSNPASPLPSVHGISSPAQSS+DPSSCT LSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQ
Subjt:  VSVGQGSQAAPTVSSTNLSQSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQ

Query:  LCCKIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYLF
        LCCKIILSGLKF+LKP THADIFSHMLNWMVNWDQRQQG+EESENMKSWRPDKALIEWLHSCLDVVWLLVEE+KCRVPFYELLRSGLQFIDNIPDDE LF
Subjt:  LCCKIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYLF

Query:  TLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPDW
        TLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGE VASLRYSPITYPSVLGEPLHGE+IAS IQRGTRDWERAMRCIRHALRTTPSPDW
Subjt:  TLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPDW

Query:  WKRVLLVAPCYRSPAQGPTPGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEWLVFSDIFFFLMKSGCIDF
        WKRVLLVAP YRS AQG +PGAVFTSEMICEATIDRIFELLKLTNS                            +IHCWQEWLVFSDIFFFLMKSGCIDF
Subjt:  WKRVLLVAPCYRSPAQGPTPGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEWLVFSDIFFFLMKSGCIDF

Query:  ADFVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNEQ
        ADFVAKL+SRVTEGG HVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKI+SFHREDK+ DPNNPQSILL+FISSCQNLRIWSLNTTTREYLN+EQ
Subjt:  ADFVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNEQ

Query:  LQKGKQIDEWWRQASK
        LQKGKQIDEWWRQASK
Subjt:  LQKGKQIDEWWRQASK

A0A6J1CXU7 mediator of RNA polymerase II transcription subunit 23

0.0e+00

85.83

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Query:  SLLELKEMFEESLLHPMFRDRERFLRNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRAEFILFALRSLCSIG
        +++ L +++      P   D  R   NKAQKRV AINRELPPRNEQFLLDFEQ+QNQFADHDQLRAVTESVLISLVVQCSGHVPRAEF+LF+LRSLCSI 
Subjt:  SLLELKEMFEESLLHPMFRDRERFLRNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRAEFILFALRSLCSIG

Query:  YINWDTFLPSLLSSVSSAEVSVGQGSQAAPTVSSTNLSQSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTGLP
        YINWDTFLPSLLSSVSSAEVSVGQG+QA PTVSSTNLSQS VLP SNPVPN+STFQSSNPASPLPSVHGISSPAQSS+DPSSCT LSPIKSSDLSG GL 
Subjt:  YINWDTFLPSLLSSVSSAEVSVGQGSQAAPTVSSTNLSQSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTGLP

Query:  SAVRVNSFLRNNAISSLRQLCCKIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYE
        SAVR+NSF RNNAISSLRQLCCKIILSGL+FNLKPATHADIFSHMLNWMVNWDQRQQGIEESE+M SWRPDKALIEWLHSCLDVVWLLVEE+KCRVPFYE
Subjt:  SAVRVNSFLRNNAISSLRQLCCKIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYE

Query:  LLRSGLQFIDNIPDDEYLFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGEPLHGEEIASGIQRGTRDW
        LLRSGLQFIDNIPDDE LFTLILEIHRRRDMMAMHMQMLDQHLH PTFGTQRIFSQTM NISGE VASLRYSPITYPSVLGEPLHGE++AS IQRGTRDW
Subjt:  LLRSGLQFIDNIPDDEYLFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGEPLHGEEIASGIQRGTRDW

Query:  ERAMRCIRHALRTTPSPDWWKRVLLVAPCYRSPAQGPTPGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQE
        ERAMRCIRHALRTTPSPDWWKRVLLVAPCYRSP+QGPTPGAVFTSEMICEATIDRIFELLKLTNS                            +IHCWQE
Subjt:  ERAMRCIRHALRTTPSPDWWKRVLLVAPCYRSPAQGPTPGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQE

Query:  WLVFSDIFFFLMKSGCIDFADFVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQ
        WLVFSDIF+FLMKSGCIDF DFVAKL+SRV EGGHHVLRTNHVTWLFAQIIRVE+V++ALNSDARKVETTRK+LSFHREDKS DPNNPQSILL+FISSCQ
Subjt:  WLVFSDIFFFLMKSGCIDFADFVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQ

Query:  NLRIWSLNTTTREYLNNEQLQKGKQIDEWWRQASK
        NLRIWSLNT TREYLNNEQLQKGKQIDEWWRQASK
Subjt:  NLRIWSLNTTTREYLNNEQLQKGKQIDEWWRQASK

A0A6J1I8Y2 mediator of RNA polymerase II transcription subunit 23

0.0e+00

89.3

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Query:  DRERFLRNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAE
        D  R   NKAQKRV AINRELPPRNEQFLLDFEQIQNQFAD+DQL AVTESVLISLVVQCSGHVPRAEF+LFALRSLCSIGYINWDTFLPSLLSS+SSAE
Subjt:  DRERFLRNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAE

Query:  VSVGQGSQAAP-TVSSTNLSQSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLR
        VS+GQGSQAAP TVS+TNLSQSGVLPSSNPVPN+STFQSSNPASPLPS+HGISSPAQSS+DP+SCT LSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLR
Subjt:  VSVGQGSQAAP-TVSSTNLSQSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLR

Query:  QLCCKIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYL
        QLCCKIILSGLKF+LKP T ADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEE+KCRVPFYELLRSGLQFIDNIPDDE L
Subjt:  QLCCKIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYL

Query:  FTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPD
        FTLILEIHRRRDMMAMHMQMLDQHLH PTFGTQRIFSQTMQNISGE VAS R+SPITYPSVLGEPLHGE+IAS IQRGTRDWERAMRCIRHALRTTPSP+
Subjt:  FTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPD

Query:  WWKRVLLVAPCYRSPAQGPTPGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEWLVFSDIFFFLMKSGCID
        WWKRVLLVAP YRSPAQG +PGAVFTSEMICEATIDRIFELLKLTNS                            +IHCWQEWLVFSDIF+FLMKSGCID
Subjt:  WWKRVLLVAPCYRSPAQGPTPGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEWLVFSDIFFFLMKSGCID

Query:  FADFVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNE
        FADFVAKL+SRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKS DPNNPQSILL+FISSCQNLRIWSLNTTTREYLNNE
Subjt:  FADFVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNE

Query:  QLQKGKQIDEWWRQASK
        QLQKGKQIDEWWRQASK
Subjt:  QLQKGKQIDEWWRQASK

SwissProt top hits

e value

%identity

Alignment

F4I4P3 Mediator of RNA polymerase II transcription subunit 23

5.1e-220

65.41

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Query:  NKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEVSVGQGS
        NK+QKRV A NR+LPPRNEQFLLDFE +Q+QF D +QLR +TESVLISLVVQCS H PRAEF+LFALR+LC I YINWDTFLPSLLSSVS+AE S+ QG 
Subjt:  NKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEVSVGQGS

Query:  Q-AAPTVSSTNLSQSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTG---LPSAVRVNSFLRNNAISSLRQLCC
        Q AA T  S+  S   V+P            S NP S LPS HGI SP+ S +        S      ++  G     +A+R +  +R  A++SLRQL C
Subjt:  Q-AAPTVSSTNLSQSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTG---LPSAVRVNSFLRNNAISSLRQLCC

Query:  KIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYLFTLI
        KIIL G++ +LKP THA+IF +M+NW+VNWD+R  G E+S   KSWR +K L EWL SCLDV+WLLVEE + R+PFYELLRSGLQFI+NIPDDE LFTLI
Subjt:  KIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYLFTLI

Query:  LEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPDWWKR
        +EIHRRRD MAMHM MLDQHLH P+FGT RI SQ   N+  E V  LR+SPITYPSVLGEPL+GE++A  I +G+ DWERA+RCIRHA+RTTPSPDWWKR
Subjt:  LEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPDWWKR

Query:  VLLVAPCYRSPAQ-GPTPGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEWLVFSDIFFFLMKSGCIDFAD
        VL+VAPCYR   Q GP PGAVFTS+MICEA IDRI ELLKLTNSGN    I L         ++     +    +CWQEWLVFSDIFFFL+KSGC DF D
Subjt:  VLLVAPCYRSPAQ-GPTPGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEWLVFSDIFFFLMKSGCIDFAD

Query:  FVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNEQLQ
        F+ KL  R+    +H+LRTNHVTWL AQIIRVELVM+ALNSDA+KVETTRKILSFHRED++ DPNNPQS+LL+F+SSCQNLRIWSL+TTTR YLNNEQL 
Subjt:  FVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNEQLQ

Query:  KGKQIDEWWR
        KGKQIDEWWR
Subjt:  KGKQIDEWWR

Q55BN0 Putative mediator of RNA polymerase II transcription subunit 23

7.1e-04

23.98

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Query:  MICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEWLVFSDIFFFLMKSGCIDFADFVAKLYSRVTEGGHHVLRTNHVTWL
        +I EATI +  +LL       Y N I+ +   +                + W+EWL+FS+ F+FL ++G +D   F+  L  +    G  + + N V  L
Subjt:  MICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEWLVFSDIFFFLMKSGCIDFADFVAKLYSRVTEGGHHVLRTNHVTWL

Query:  FAQIIRVELVMSALNSDARKVETTR------KILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTT---------REYLNNEQLQ--KGKQIDEW
         ++ I ++ V +      + V +         +LSF   D S  P   Q+I L F        +  +NT T         ++ L+N   Q    +Q   W
Subjt:  FAQIIRVELVMSALNSDARKVETTR------KILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTT---------REYLNNEQLQ--KGKQIDEW

Query:  WRQASKVSAAQSLYETLKTAT
        W ++ KV      + T++  T
Subjt:  WRQASKVSAAQSLYETLKTAT

Arabidopsis top hits

e value

%identity

Alignment

AT1G23230.1 CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629); Has 187 Blast hits to 184 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

3.6e-221

65.41

Show/hide

Query:  NKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEVSVGQGS
        NK+QKRV A NR+LPPRNEQFLLDFE +Q+QF D +QLR +TESVLISLVVQCS H PRAEF+LFALR+LC I YINWDTFLPSLLSSVS+AE S+ QG 
Subjt:  NKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEVSVGQGS

Query:  Q-AAPTVSSTNLSQSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTG---LPSAVRVNSFLRNNAISSLRQLCC
        Q AA T  S+  S   V+P            S NP S LPS HGI SP+ S +        S      ++  G     +A+R +  +R  A++SLRQL C
Subjt:  Q-AAPTVSSTNLSQSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTG---LPSAVRVNSFLRNNAISSLRQLCC

Query:  KIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYLFTLI
        KIIL G++ +LKP THA+IF +M+NW+VNWD+R  G E+S   KSWR +K L EWL SCLDV+WLLVEE + R+PFYELLRSGLQFI+NIPDDE LFTLI
Subjt:  KIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYLFTLI

Query:  LEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPDWWKR
        +EIHRRRD MAMHM MLDQHLH P+FGT RI SQ   N+  E V  LR+SPITYPSVLGEPL+GE++A  I +G+ DWERA+RCIRHA+RTTPSPDWWKR
Subjt:  LEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPDWWKR

Query:  VLLVAPCYRSPAQ-GPTPGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEWLVFSDIFFFLMKSGCIDFAD
        VL+VAPCYR   Q GP PGAVFTS+MICEA IDRI ELLKLTNSGN    I L         ++     +    +CWQEWLVFSDIFFFL+KSGC DF D
Subjt:  VLLVAPCYRSPAQ-GPTPGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEWLVFSDIFFFLMKSGCIDFAD

Query:  FVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNEQLQ
        F+ KL  R+    +H+LRTNHVTWL AQIIRVELVM+ALNSDA+KVETTRKILSFHRED++ DPNNPQS+LL+F+SSCQNLRIWSL+TTTR YLNNEQL 
Subjt:  FVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNEQLQ

Query:  KGKQIDEWWR
        KGKQIDEWWR
Subjt:  KGKQIDEWWR

AT1G23230.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629).

1.3e-218

64.75

Show/hide

Query:  NKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEVSVGQGS
        NK+QKRV A NR+LPPRNEQFLLDFE +Q+QF D +QLR +TESVLISLVVQCS H PRAEF+LFALR+LC I YINWDTFLPSLLSSVS+AE S+ QG 
Subjt:  NKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEVSVGQGS

Query:  Q-AAPTVSSTNLSQSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTG---LPSAVRVNSFLRNNAISSLRQLCC
        Q AA T  S+  S   V+P            S NP S LPS HGI SP+ S +        S      ++  G     +A+R +  +R  A++SLRQL C
Subjt:  Q-AAPTVSSTNLSQSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTG---LPSAVRVNSFLRNNAISSLRQLCC

Query:  KIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYLFTLI
        KIIL G++ +LKP THA+IF +M+NW+VNWD+R  G E+S   KSWR +K L EWL SCLDV+WLLVEE + R+PFYELLRSGLQFI+NIPDDE LFTLI
Subjt:  KIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYLFTLI

Query:  LEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPDWWKR
        +EIHRRRD MAMHM MLDQHLH P+FGT RI SQ   N+  E V  LR+SPITYPSVLGEPL+GE++A  I +G+ DWERA+RCIRHA+RTTPSPDWWKR
Subjt:  LEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPDWWKR

Query:  VLLVAPCYRSPAQ-GPTPGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEWLVFSDIFFFLMKSGCIDFAD
        VL+VAPCYR   Q GP PGAVFTS+MICEA IDRI ELLKLTNS                              +CWQEWLVFSDIFFFL+KSGC DF D
Subjt:  VLLVAPCYRSPAQ-GPTPGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEWLVFSDIFFFLMKSGCIDFAD

Query:  FVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNEQLQ
        F+ KL  R+    +H+LRTNHVTWL AQIIRVELVM+ALNSDA+KVETTRKILSFHRED++ DPNNPQS+LL+F+SSCQNLRIWSL+TTTR YLNNEQL 
Subjt:  FVAKLYSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNEQLQ

Query:  KGKQIDEWWR
        KGKQIDEWWR
Subjt:  KGKQIDEWWR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTTGGAAGCCACACCGATAAAGCAAACCAATAATATTTGGAGCTCGGGGGTAGAGGCAGGGGAGAAGAGGCAGGCCTGTGAGACGGATAATAGTTCCGCAGGGAGCTC
CCCTTCGCCTTTGTTTGGGTTCAATCGCGCTTTGTCCGATAGGGAAGCGATGGATGTTACGACTCTTCTTTCTTTGATTGAAGAGTTTGAGTTTAGGTTGGGGAGGAGAG
ATAATCGTTGTTGGAGCCCTAAGCCTTCCGAGGGGTTCTTGTGTAAATCTTTCTTTTGTTCGTTGTTGAATCCCTCTCCCCATAGTGATACTATATTCTCCATTTTGTGG
AAGATGACGAGTTTGTTGGAGCTCAAGGAGATGTTTGAGGAGTCCCTCCTCCATCCAATGTTCCGTGATAGAGAAAGATTTTTACGGAACAAGGCCCAAAAGCGTGTTCA
AGCTATTAACAGAGAGCTTCCTCCTCGAAATGAGCAGTTCCTTTTAGACTTTGAGCAAATTCAGAATCAGTTTGCAGACCATGATCAGTTGCGTGCTGTGACCGAGTCAG
TTCTTATCTCCCTAGTTGTGCAGTGCAGTGGTCATGTACCAAGGGCAGAATTTATTCTCTTTGCTCTACGGAGTTTGTGCAGTATAGGTTACATCAATTGGGACACTTTT
TTACCCTCCCTTCTTTCTTCAGTCTCATCTGCAGAAGTTTCCGTGGGTCAGGGAAGTCAAGCTGCTCCTACTGTCTCATCAACAAATTTATCGCAGTCTGGAGTGCTTCC
ATCCTCAAACCCAGTCCCTAATAATTCTACTTTTCAGTCTTCCAATCCTGCCTCTCCATTACCATCAGTTCATGGAATCAGTTCACCAGCTCAATCTAGTATGGATCCAT
CTTCTTGTACAACATTATCACCAATCAAATCCTCTGATCTTTCTGGGACTGGATTACCGTCTGCAGTTAGGGTCAATTCATTTTTGAGGAATAATGCAATAAGCAGTCTA
CGTCAGCTTTGTTGCAAGATTATCTTAAGTGGTCTTAAGTTTAATTTGAAACCAGCGACGCATGCTGATATTTTTTCCCATATGCTTAATTGGATGGTTAATTGGGACCA
ACGGCAACAAGGGATTGAGGAATCTGAGAATATGAAATCCTGGAGGCCTGACAAGGCTCTCATTGAGTGGCTACATAGCTGTTTGGATGTGGTCTGGCTTTTGGTTGAGG
AGAGTAAATGTCGGGTGCCTTTCTATGAATTACTACGTAGTGGCTTGCAATTCATAGATAACATTCCTGATGATGAATACTTATTTACACTCATCTTGGAGATCCATAGG
AGGCGAGATATGATGGCAATGCACATGCAGATGTTAGATCAACACCTTCACAGCCCTACATTTGGGACCCAGCGGATTTTTTCTCAAACAATGCAGAACATATCTGGTGA
AACAGTAGCAAGCTTGCGCTATTCACCAATAACATATCCAAGTGTACTGGGTGAACCTTTGCATGGAGAGGAAATTGCATCTGGTATTCAGAGAGGAACTCGAGACTGGG
AAAGAGCTATGCGTTGTATAAGGCATGCTCTTCGCACAACTCCATCCCCTGACTGGTGGAAGCGTGTGCTTCTTGTGGCTCCTTGCTATAGGTCTCCTGCACAAGGACCC
ACTCCTGGTGCTGTTTTTACATCTGAGATGATATGTGAAGCGACAATTGATAGAATCTTTGAGCTTTTGAAGTTGACGAATTCAGGCAACTACAGTAATAGTATCCTTTT
GTCTACATATGCTTCTGTTGATGTGTGCATTGCCCATTTCATTAGTTCTGTAAGTCCCAAGATACATTGCTGGCAAGAGTGGCTTGTCTTCTCAGATATATTCTTTTTTC
TTATGAAAAGTGGATGTATTGATTTTGCGGACTTTGTGGCTAAGCTGTACTCTCGTGTAACAGAGGGAGGTCACCATGTTTTAAGGACAAATCATGTAACTTGGCTGTTT
GCACAAATCATTCGGGTTGAACTTGTGATGAGTGCTTTGAATTCAGATGCAAGGAAGGTGGAGACGACAAGAAAAATATTATCATTTCATAGAGAAGATAAAAGTGGTGA
TCCGAATAATCCTCAAAGCATCCTTCTTGAATTTATTAGTAGTTGTCAAAACTTGCGTATTTGGTCACTGAACACAACAACCAGAGAATATTTGAATAATGAGCAGCTAC
AGAAAGGAAAACAAATTGATGAATGGTGGAGGCAAGCCAGTAAAGTAAGTGCCGCACAGTCGCTTTACGAGACCCTAAAGACCGCGACTGTGACAGTTGGTATCAGAGCC
CAGTTGGCTCCTGAGATAGAAGTCCGAAATCATGTCGGCAGTAAAACAGTTGGGCAAGACCCATGTGGAACGATTGGTAGAGATCGAAGAGCAGATGCTCTACCTGAGGG
AAGTCCCCGATTCGGTTCGCTTCCTAGAATCTCGTCTTGA

mRNA sequence

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Protein sequence

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MLEATPIKQTNNIWSSGVEAGEKRQACETDNSSAGSSPSPLFGFNRALSDREAMDVTTLLSLIEEFEFRLGRRDNRCWSPKPSEGFLCKSFFCSLLNPSPHSDTIFSILW
KMTSLLELKEMFEESLLHPMFRDRERFLRNKAQKRVQAINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRAEFILFALRSLCSIGYINWDTF
LPSLLSSVSSAEVSVGQGSQAAPTVSSTNLSQSGVLPSSNPVPNNSTFQSSNPASPLPSVHGISSPAQSSMDPSSCTTLSPIKSSDLSGTGLPSAVRVNSFLRNNAISSL
RQLCCKIILSGLKFNLKPATHADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALIEWLHSCLDVVWLLVEESKCRVPFYELLRSGLQFIDNIPDDEYLFTLILEIHR
RRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGETVASLRYSPITYPSVLGEPLHGEEIASGIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPCYRSPAQGP
TPGAVFTSEMICEATIDRIFELLKLTNSGNYSNSILLSTYASVDVCIAHFISSVSPKIHCWQEWLVFSDIFFFLMKSGCIDFADFVAKLYSRVTEGGHHVLRTNHVTWLF
AQIIRVELVMSALNSDARKVETTRKILSFHREDKSGDPNNPQSILLEFISSCQNLRIWSLNTTTREYLNNEQLQKGKQIDEWWRQASKVSAAQSLYETLKTATVTVGIRA
QLAPEIEVRNHVGSKTVGQDPCGTIGRDRRADALPEGSPRFGSLPRISS

Spg008492 (gene) of Sponge gourd (cylindrica) v1 genome