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Spg008511 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008511
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionconserved peptide upstream open reading frame 53
Genome locationscaffold10:30257562..30259708
RNA-Seq ExpressionSpg008511
SyntenySpg008511
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2664121.1 hypothetical protein I3760_16G064500 [Carya illinoinensis]7.9e-2069.32Show/hide
Query:  MSAGFHLAVIGALLQLSLSSSSSSSSYLAL-SCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT
        MSAGF L +IGALL+L L S+++ S+  A+  CCM+LC F+Q LNLV+ SVSMRLRPKRTCSGVKCFGAFHIKRF F L LF RGG T
Subjt:  MSAGFHLAVIGALLQLSLSSSSSSSSYLAL-SCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT

KAG6579195.1 hypothetical protein SDJN03_23643, partial [Cucurbita argyrosperma subsp. sororia]7.2e-2987.5Show/hide
Query:  MSAGFHLAVIGALLQLSLSSSSSSSSYLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRF-SFLLLLFRRGGFT
        MSAGF LAVIGALLQL  SSSSSS   L LSCCMILC FKQSLNLVFPSVSMR RPKRTCSGVKCFGAFHIKRF SF+LLLFRRGGFT
Subjt:  MSAGFHLAVIGALLQLSLSSSSSSSSYLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRF-SFLLLLFRRGGFT

KAG6672509.1 hypothetical protein I3842_16G060900 [Carya illinoinensis]1.8e-1969.32Show/hide
Query:  MSAGFHLAVIGALLQLSLSSSSSSSSYLAL-SCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT
        MSAGF L +IGALL+L L S ++ S+  A+  CCM+LC F+Q LNLV+ SVSMRLRPKRTCSGVKCFGAFHIKRF F L LF RGG T
Subjt:  MSAGFHLAVIGALLQLSLSSSSSSSSYLAL-SCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT

KGN45959.1 hypothetical protein Csa_005610 [Cucumis sativus]2.2e-2275.86Show/hide
Query:  MSAGFHLAVIGALLQLSLSSSSSSSSYLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT
        MSAGF LAVIGALLQL  S           S  +IL SFKQSLNL+F SVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFR+GGFT
Subjt:  MSAGFHLAVIGALLQLSLSSSSSSSSYLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT

PQP95864.1 hypothetical protein Pyn_11113 [Prunus yedoensis var. nudiflora]1.4e-1667.82Show/hide
Query:  MSAGFHLAVIGALLQLSLSSSSSSSSYLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT
        MSA F LAVIGALL+L + +SSS S+YLA+ C M+LC F Q LN V  SVSM LRPKRTCSG++ FGAFHIKRFSF L LF RG  T
Subjt:  MSAGFHLAVIGALLQLSLSSSSSSSSYLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT

TrEMBL top hitse value%identityAlignment
A0A0A0KAV1 Uncharacterized protein1.1e-2275.86Show/hide
Query:  MSAGFHLAVIGALLQLSLSSSSSSSSYLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT
        MSAGF LAVIGALLQL  S           S  +IL SFKQSLNL+F SVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFR+GGFT
Subjt:  MSAGFHLAVIGALLQLSLSSSSSSSSYLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT

A0A314XMT5 Uncharacterized protein6.8e-1767.82Show/hide
Query:  MSAGFHLAVIGALLQLSLSSSSSSSSYLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT
        MSA F LAVIGALL+L + +SSS S+YLA+ C M+LC F Q LN V  SVSM LRPKRTCSG++ FGAFHIKRFSF L LF RG  T
Subjt:  MSAGFHLAVIGALLQLSLSSSSSSSSYLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT

A0A314YXV8 Uncharacterized protein6.8e-1767.82Show/hide
Query:  MSAGFHLAVIGALLQLSLSSSSSSSSYLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT
        MSA F LAVIGALL+L + +SSS S+YLA+ C M+LC F Q LN V  SVSM LRPKRTCSG++ FGAFHIKRFSF L LF RG  T
Subjt:  MSAGFHLAVIGALLQLSLSSSSSSSSYLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT

A0A7J8T161 Uncharacterized protein6.8e-1760.92Show/hide
Query:  MSAGFHLAVIGALLQLSLSSSSSSSSYLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT
        MS  F LA+IGA LQL  SSS+   S+L +   + LC ++Q LNLV PSVSMRLRPK+TCSGV CFG FHIK+  F LLLF RG +T
Subjt:  MSAGFHLAVIGALLQLSLSSSSSSSSYLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT

A0A7J8VXR7 Uncharacterized protein6.8e-1760.92Show/hide
Query:  MSAGFHLAVIGALLQLSLSSSSSSSSYLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT
        MS  F LA+IGA LQL  SSS+   S+L +   + LC ++Q LNLV PSVSMRLRPK+TCSGV CFG FHIK+  F LLLF RG +T
Subjt:  MSAGFHLAVIGALLQLSLSSSSSSSSYLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G25472.1 conserved peptide upstream open reading frame 549.1e-0649.4Show/hide
Query:  MSAGFHLAVIGALLQLSL---SSSSSSSS--YLALSCCMIL-----CSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKR
        MSA    A I +L  +S    SSSSSSSS  +  LS   +L     CS +Q L L  PS+SM LR KRTCSGV+ FG FH K+
Subjt:  MSAGFHLAVIGALLQLSL---SSSSSSSS--YLALSCCMIL-----CSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKR

AT1G68552.1 conserved peptide upstream open reading frame 532.5e-1153.49Show/hide
Query:  MSAGFHLAVIGALLQLS--LSSSSSSSSYLALSC---CMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIK--RFSFLLL
        MSAGF   VI +L+ +S  +SSSSS SS    SC    +  C  KQ L L  PS+SMRLRPKRTCS V+ FG FHIK  +FSF ++
Subjt:  MSAGFHLAVIGALLQLS--LSSSSSSSSYLALSC---CMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIK--RFSFLLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCTGGGTTTCACTTGGCTGTGATTGGGGCTCTGTTGCAGCTCTCTCTTTCTTCTTCTTCTTCTTCCTCCTCCTACTTGGCTCTCTCTTGCTGTATGATTCTCTG
CTCTTTCAAGCAGAGCCTCAATCTGGTGTTCCCATCTGTTTCGATGCGTTTGAGACCGAAGAGGACTTGTTCTGGAGTGAAGTGCTTTGGAGCTTTTCATATAAAACGAT
TCTCATTCCTTCTTTTGCTCTTCAGAAGAGGGGGTTTCACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGCTGGGTTTCACTTGGCTGTGATTGGGGCTCTGTTGCAGCTCTCTCTTTCTTCTTCTTCTTCTTCCTCCTCCTACTTGGCTCTCTCTTGCTGTATGATTCTCTG
CTCTTTCAAGCAGAGCCTCAATCTGGTGTTCCCATCTGTTTCGATGCGTTTGAGACCGAAGAGGACTTGTTCTGGAGTGAAGTGCTTTGGAGCTTTTCATATAAAACGAT
TCTCATTCCTTCTTTTGCTCTTCAGAAGAGGGGGTTTCACTTAA
Protein sequenceShow/hide protein sequence
MSAGFHLAVIGALLQLSLSSSSSSSSYLALSCCMILCSFKQSLNLVFPSVSMRLRPKRTCSGVKCFGAFHIKRFSFLLLLFRRGGFT