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Spg008515 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008515
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCore-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Genome locationscaffold10:35437845..35440355
RNA-Seq ExpressionSpg008515
SyntenySpg008515
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647260.1 hypothetical protein Csa_018328, partial [Cucumis sativus]3.0e-0569.23Show/hide
Query:  RIGDGKMKSVIPKRRKLVKTMMYHCIKDFVRSLFRPSPE
        R+G  K+KSVIPK+RKLVKTM+YH +KDF+ SLFRPS +
Subjt:  RIGDGKMKSVIPKRRKLVKTMMYHCIKDFVRSLFRPSPE

KAG6602131.1 hypothetical protein SDJN03_07364, partial [Cucurbita argyrosperma subsp. sororia]7.2e-0774.36Show/hide
Query:  RIGDGKMKSVIPKRRKLVKTMMYHCIKDFVRSLFRPSPE
        R G GK+KSVIPK+RKLVKTMMYHCIK+F++SLFR  P+
Subjt:  RIGDGKMKSVIPKRRKLVKTMMYHCIKDFVRSLFRPSPE

KAG6602132.1 hypothetical protein SDJN03_07365, partial [Cucurbita argyrosperma subsp. sororia]5.9e-0940.83Show/hide
Query:  ILMDPIITPHNNPIHLQGTVVAILSPPTVATVTPARRNLEKTTEFRVL--------------LIPYPAAVVDGTLL-LNSCRIGDGKMKSVIPKRRKLVK
        ++ DP  TPH+ P      +  I  P +V  + PA       +   V+              LI   A    GTL   +  R+G GK KSVIPKRRKLVK
Subjt:  ILMDPIITPHNNPIHLQGTVVAILSPPTVATVTPARRNLEKTTEFRVL--------------LIPYPAAVVDGTLL-LNSCRIGDGKMKSVIPKRRKLVK

Query:  TMMYHCIKDFVRSLFRPSPE
        TMMYHCIK+F++SLFR  PE
Subjt:  TMMYHCIKDFVRSLFRPSPE

KAG6602134.1 hypothetical protein SDJN03_07367, partial [Cucurbita argyrosperma subsp. sororia]2.9e-0879.49Show/hide
Query:  RIGDGKMKSVIPKRRKLVKTMMYHCIKDFVRSLFRPSPE
        R G GK+KSVIPK+RKLVKTMMYHCIKDF++SLFRP P+
Subjt:  RIGDGKMKSVIPKRRKLVKTMMYHCIKDFVRSLFRPSPE

TYK18680.1 hypothetical protein E5676_scaffold481G00190 [Cucumis melo var. makuwa]3.6e-0671.79Show/hide
Query:  GDGKMKSVIPKRRKLVKTMMYHCIKDFVRSLFRPSPEGR
        G G MKSVIPK+RKLVK MMY CIK++++SLFRP+PE R
Subjt:  GDGKMKSVIPKRRKLVKTMMYHCIKDFVRSLFRPSPEGR

TrEMBL top hitse value%identityAlignment
A0A0A0KDQ7 Uncharacterized protein1.5e-0569.23Show/hide
Query:  RIGDGKMKSVIPKRRKLVKTMMYHCIKDFVRSLFRPSPE
        R+G  K+KSVIPK+RKLVKTM+YH +KDF+ SLFRPS +
Subjt:  RIGDGKMKSVIPKRRKLVKTMMYHCIKDFVRSLFRPSPE

A0A0A0KFQ1 Uncharacterized protein4.7e-0462.16Show/hide
Query:  GDGKMKSVIPKRRKLVKTMMYHCIKDFVRSLFRPSPE
        G G +KSVIPK+R+LVK MMY CIK++++SLF P+P+
Subjt:  GDGKMKSVIPKRRKLVKTMMYHCIKDFVRSLFRPSPE

A0A5D3D590 Uncharacterized protein1.7e-0671.79Show/hide
Query:  GDGKMKSVIPKRRKLVKTMMYHCIKDFVRSLFRPSPEGR
        G G MKSVIPK+RKLVK MMY CIK++++SLFRP+PE R
Subjt:  GDGKMKSVIPKRRKLVKTMMYHCIKDFVRSLFRPSPEGR

A0A6J1CJW3 uncharacterized protein LOC1110119631.2e-0450.67Show/hide
Query:  RVLLIPYPAAVVDGTLLL--NSCRIGD--------------GKMKSVIPKRRKLVKTMMYHCIKDFVRSLFRPSP
        RVLL P P  + DGT L   N   I +              GK+KSVIPKRR LVKTM+Y+ IKDF+ SLFRP P
Subjt:  RVLLIPYPAAVVDGTLLL--NSCRIGD--------------GKMKSVIPKRRKLVKTMMYHCIKDFVRSLFRPSP

SwissProt top hitse value%identityAlignment
Q9LFQ0 Beta-glucuronosyltransferase GlcAT14B7.8e-0461.54Show/hide
Query:  QRNESMAVIAKANLVTYRGSTMVANTLHSAAV-RSSGGD
        QR +++ +I KAN VTYRG TMVANTLH+AA+    GGD
Subjt:  QRNESMAVIAKANLVTYRGSTMVANTLHSAAV-RSSGGD

Arabidopsis top hitse value%identityAlignment
AT5G15050.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein5.5e-0561.54Show/hide
Query:  QRNESMAVIAKANLVTYRGSTMVANTLHSAAV-RSSGGD
        QR +++ +I KAN VTYRG TMVANTLH+AA+    GGD
Subjt:  QRNESMAVIAKANLVTYRGSTMVANTLHSAAV-RSSGGD

AT5G39990.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein3.6e-0465.62Show/hide
Query:  QRNESMAVIAKANLVTYRGSTMVANTLHSAAV
        +R  ++ +I KANLVTYRG TMVANTLH+AA+
Subjt:  QRNESMAVIAKANLVTYRGSTMVANTLHSAAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGAACCCCTGCAGGGCCGGAACAGAGCATCTCTTCCCGAGTCTGGAGACAGAGCCGGCCACCTGGTTCAAGTCATGGACTTTCTCGGTCAGGACCAGTCGCATGA
GATGATGGTTGTAATTCCCTTGGCGGTGAGAATTTGGCTGTGGAGACTGGAGAATTGGAGGTGTTTGAGGTGTTGTGGAGGTGGATGGCTCGGGAAATTACATTGGCGAT
TTGAAAGGAAAGAATGTGATTGTGGCGGTGGGATTTGGAGGCTTGTGGGGAAGATTGGAACTTGGGCTGCTCCACATTTTGAGAGTTCTCAAAGGAATGAATCCATGGCA
GTCATTGCTAAGGCTAATCTTGTTACCTACCGTGGCTCGACTATGGTGGCCAACACATTGCACTCAGCAGCGGTGAGGAGCTCCGGCGGCGACGGGGAGGAGATCCGGCG
GCGGGGAGAAGAAGAAAGAGAAGCCGAGAAGCTTCTCAGAAACCTGAATCCGGTCAGGGTCAATGGTGGCTCCCATCAAAAGCTTTCACACATCTATAAATATAAACCCC
CAACAAAACCTTCCTTGCACCGCCGCGAAACCCAAACTGAAAACAAATTCGGTGAGATTCTCATGGATCCAATCATTACCCCACATAACAATCCGATCCACTTGCAGGGC
ACCGTCGTCGCAATTCTGAGTCCGCCGACGGTTGCCACTGTAACTCCGGCGAGAAGAAACTTGGAGAAGACGACGGAATTCCGAGTGCTGCTCATTCCATACCCAGCCGC
CGTCGTCGACGGGACTCTGCTACTCAACTCCTGCAGAATCGGCGACGGGAAAATGAAATCTGTGATTCCGAAGAGGAGGAAGTTAGTGAAGACGATGATGTACCACTGTA
TTAAGGATTTCGTCAGATCTCTCTTTCGTCCCTCGCCGGAAGGCCGACACCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCGAACCCCTGCAGGGCCGGAACAGAGCATCTCTTCCCGAGTCTGGAGACAGAGCCGGCCACCTGGTTCAAGTCATGGACTTTCTCGGTCAGGACCAGTCGCATGA
GATGATGGTTGTAATTCCCTTGGCGGTGAGAATTTGGCTGTGGAGACTGGAGAATTGGAGGTGTTTGAGGTGTTGTGGAGGTGGATGGCTCGGGAAATTACATTGGCGAT
TTGAAAGGAAAGAATGTGATTGTGGCGGTGGGATTTGGAGGCTTGTGGGGAAGATTGGAACTTGGGCTGCTCCACATTTTGAGAGTTCTCAAAGGAATGAATCCATGGCA
GTCATTGCTAAGGCTAATCTTGTTACCTACCGTGGCTCGACTATGGTGGCCAACACATTGCACTCAGCAGCGGTGAGGAGCTCCGGCGGCGACGGGGAGGAGATCCGGCG
GCGGGGAGAAGAAGAAAGAGAAGCCGAGAAGCTTCTCAGAAACCTGAATCCGGTCAGGGTCAATGGTGGCTCCCATCAAAAGCTTTCACACATCTATAAATATAAACCCC
CAACAAAACCTTCCTTGCACCGCCGCGAAACCCAAACTGAAAACAAATTCGGTGAGATTCTCATGGATCCAATCATTACCCCACATAACAATCCGATCCACTTGCAGGGC
ACCGTCGTCGCAATTCTGAGTCCGCCGACGGTTGCCACTGTAACTCCGGCGAGAAGAAACTTGGAGAAGACGACGGAATTCCGAGTGCTGCTCATTCCATACCCAGCCGC
CGTCGTCGACGGGACTCTGCTACTCAACTCCTGCAGAATCGGCGACGGGAAAATGAAATCTGTGATTCCGAAGAGGAGGAAGTTAGTGAAGACGATGATGTACCACTGTA
TTAAGGATTTCGTCAGATCTCTCTTTCGTCCCTCGCCGGAAGGCCGACACCCATGA
Protein sequenceShow/hide protein sequence
MLEPLQGRNRASLPESGDRAGHLVQVMDFLGQDQSHEMMVVIPLAVRIWLWRLENWRCLRCCGGGWLGKLHWRFERKECDCGGGIWRLVGKIGTWAAPHFESSQRNESMA
VIAKANLVTYRGSTMVANTLHSAAVRSSGGDGEEIRRRGEEEREAEKLLRNLNPVRVNGGSHQKLSHIYKYKPPTKPSLHRRETQTENKFGEILMDPIITPHNNPIHLQG
TVVAILSPPTVATVTPARRNLEKTTEFRVLLIPYPAAVVDGTLLLNSCRIGDGKMKSVIPKRRKLVKTMMYHCIKDFVRSLFRPSPEGRHP