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Spg008525 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008525
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTranslocase subunit seca
Genome locationscaffold10:29776281..29778176
RNA-Seq ExpressionSpg008525
SyntenySpg008525
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601783.1 hypothetical protein SDJN03_07016, partial [Cucurbita argyrosperma subsp. sororia]8.5e-6376.44Show/hide
Query:  MKQVAVQQNAFSVCEEMLSAAATDRRERLVCPKPRRLGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSRVS
        M QVAVQ+N FSV EEM+ AA TDRRERLVCPKPRRLGL+N  VND NPFRHRFDS+AANDALDLLF KGG   ENFNSS T  ASSPPY CG+PPSRV+
Subjt:  MKQVAVQQNAFSVCEEMLSAAATDRRERLVCPKPRRLGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSRVS

Query:  NPLIQDARFGDEKPKLLPLFS-----PPSSPPTSAGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNR-IPALA
        NPLIQDARFG+EKPK+LP+FS     PP SPP S  R GG VR NFG+ PAVRIEGFDCRLDRE RNR IPALA
Subjt:  NPLIQDARFGDEKPKLLPLFS-----PPSSPPTSAGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNR-IPALA

KAG7032498.1 hypothetical protein SDJN02_06547 [Cucurbita argyrosperma subsp. argyrosperma]1.7e-6377.01Show/hide
Query:  MKQVAVQQNAFSVCEEMLSAAATDRRERLVCPKPRRLGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSRVS
        M QVAVQ+N FSV EEM+ AA TDRRERLVCPKPRRLGL+N  VND NPFRHRFDS+AANDALDLLF KGG   ENFNSSST  ASSPPY CG+PPSRV+
Subjt:  MKQVAVQQNAFSVCEEMLSAAATDRRERLVCPKPRRLGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSRVS

Query:  NPLIQDARFGDEKPKLLPLFS-----PPSSPPTSAGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNR-IPALA
        NPLIQDARFG+EKPK+LP+FS     PP SPP S  R GG VR NFG+ PAVRIEGFDCRLDRE RNR IPALA
Subjt:  NPLIQDARFGDEKPKLLPLFS-----PPSSPPTSAGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNR-IPALA

XP_022923501.1 uncharacterized protein LOC111431174 [Cucurbita moschata]7.7e-6477.59Show/hide
Query:  MKQVAVQQNAFSVCEEMLSAAATDRRERLVCPKPRRLGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSRVS
        M QVAVQ+N FSV EEM  AA TDRRERLVCPKPRRLGL+N  VND NPFRHRFDS+AANDALDLLFFKGG   ENFNSSST  ASSPPY CG+PPSRV+
Subjt:  MKQVAVQQNAFSVCEEMLSAAATDRRERLVCPKPRRLGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSRVS

Query:  NPLIQDARFGDEKPKLLPLFS-----PPSSPPTSAGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNR-IPALA
        NPLIQDARFG+EKPK+LP+FS     PP SPP S  R GG VR NFG+ PAVRIEGFDCRLDRE RNR IPALA
Subjt:  NPLIQDARFGDEKPKLLPLFS-----PPSSPPTSAGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNR-IPALA

XP_022971782.1 uncharacterized protein LOC111470460 [Cucurbita maxima]1.3e-6377.59Show/hide
Query:  MKQVAVQQNAFSVCEEMLSAAATDRRERLVCPKPRRLGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSRVS
        M QVAVQ+N FSV EEM+ AA TDRRERLVCPKPRRLGL+NA  ND NPFRHRFDSIAANDALDLLFFKGG   ENF SSST  ASSPPY CG+PPSRV+
Subjt:  MKQVAVQQNAFSVCEEMLSAAATDRRERLVCPKPRRLGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSRVS

Query:  NPLIQDARFGDEKPKLLPLFS-----PPSSPPTSAGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNR-IPALA
        NPLIQDARFG+EKPK+LP+FS     PP SPP S  R GG VR NFG+ PAVRIEGFDCRLDRE RNR IPALA
Subjt:  NPLIQDARFGDEKPKLLPLFS-----PPSSPPTSAGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNR-IPALA

XP_038906747.1 uncharacterized protein LOC120092671 [Benincasa hispida]1.1e-6282.61Show/hide
Query:  VCEEMLSAAATDRRERLVCPKPRRLGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSRVSNPLIQDARFGDE
        VCEEM++AA  DRRERLVCPKPRRLGL+N   ND NPFRHRFDS    DALDLLFFKGG G ENFNSSST  ASSPPYFCGSPPSRV+NPLIQDARFGDE
Subjt:  VCEEMLSAAATDRRERLVCPKPRRLGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSRVSNPLIQDARFGDE

Query:  KPKLLPLF----SPPSSPPTSAGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNR-IPALA
        KPKLLPLF    SPPSSPP SAGRKGGCVR+NFG+NPAVRIEGFDCRLDRE RNR +PALA
Subjt:  KPKLLPLF----SPPSSPPTSAGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNR-IPALA

TrEMBL top hitse value%identityAlignment
A0A0A0KRF1 Uncharacterized protein3.0e-6181.37Show/hide
Query:  VCEEMLSAAATDRRERLVCPKPRRLGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSRVSNPLIQDARFGDE
        VCEEM   AATDRRER+VCPKPRRLGL+N   ND NPFRHRFDS    DALDLLF KGG G ENFNSS+   ASSPPYFCGSPPSRV+NPLIQDARFGDE
Subjt:  VCEEMLSAAATDRRERLVCPKPRRLGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSRVSNPLIQDARFGDE

Query:  KPKLLPLF----SPPSSPPTSAGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNR-IPALA
        KPKLLPLF    SPP SPP SAGRKGGCVRVNFG NPAVRIEGFDCRLDRE RNR IPALA
Subjt:  KPKLLPLF----SPPSSPPTSAGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNR-IPALA

A0A1S3CR46 uncharacterized protein LOC1035033851.9e-6080.75Show/hide
Query:  VCEEMLSAAATDRRERLVCPKPRRLGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSRVSNPLIQDARFGDE
        VCEEM S AATDRRER+VCPKPRRLGL+N   ND NPFRHRFDS    DA+DLLF KGG G E FNSS+T  ASS PYFCGSPPSRV+NPLIQDARFGDE
Subjt:  VCEEMLSAAATDRRERLVCPKPRRLGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSRVSNPLIQDARFGDE

Query:  KPKLLPLF----SPPSSPPTSAGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNR-IPALA
        KPKLLPLF    SPP SPP SAGRKGGCVRVNFG+NPAVRIEGFDCRLDRE RNR IPALA
Subjt:  KPKLLPLF----SPPSSPPTSAGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNR-IPALA

A0A5D3C147 Uncharacterized protein1.1e-5879.49Show/hide
Query:  LSAAATDRRERLVCPKPRRLGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSRVSNPLIQDARFGDEKPKLL
        + +AATDRRER+VCPKPRRLGL+N   ND NPFRHRFDS    DA+DLLF KGG G E FNSS+T  ASS PYFCGSPPSRV+NPLIQDARFGDEKPKLL
Subjt:  LSAAATDRRERLVCPKPRRLGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSRVSNPLIQDARFGDEKPKLL

Query:  PLF----SPPSSPPTSAGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNR-IPALA
        PLF    SPP SPP SAGRKGGCVRVNFG+NPAVRIEGFDCRLDRE RNR IPALA
Subjt:  PLF----SPPSSPPTSAGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNR-IPALA

A0A6J1E6Z2 uncharacterized protein LOC1114311743.7e-6477.59Show/hide
Query:  MKQVAVQQNAFSVCEEMLSAAATDRRERLVCPKPRRLGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSRVS
        M QVAVQ+N FSV EEM  AA TDRRERLVCPKPRRLGL+N  VND NPFRHRFDS+AANDALDLLFFKGG   ENFNSSST  ASSPPY CG+PPSRV+
Subjt:  MKQVAVQQNAFSVCEEMLSAAATDRRERLVCPKPRRLGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSRVS

Query:  NPLIQDARFGDEKPKLLPLFS-----PPSSPPTSAGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNR-IPALA
        NPLIQDARFG+EKPK+LP+FS     PP SPP S  R GG VR NFG+ PAVRIEGFDCRLDRE RNR IPALA
Subjt:  NPLIQDARFGDEKPKLLPLFS-----PPSSPPTSAGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNR-IPALA

A0A6J1I2X1 uncharacterized protein LOC1114704606.4e-6477.59Show/hide
Query:  MKQVAVQQNAFSVCEEMLSAAATDRRERLVCPKPRRLGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSRVS
        M QVAVQ+N FSV EEM+ AA TDRRERLVCPKPRRLGL+NA  ND NPFRHRFDSIAANDALDLLFFKGG   ENF SSST  ASSPPY CG+PPSRV+
Subjt:  MKQVAVQQNAFSVCEEMLSAAATDRRERLVCPKPRRLGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSST--ASSPPYFCGSPPSRVS

Query:  NPLIQDARFGDEKPKLLPLFS-----PPSSPPTSAGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNR-IPALA
        NPLIQDARFG+EKPK+LP+FS     PP SPP S  R GG VR NFG+ PAVRIEGFDCRLDRE RNR IPALA
Subjt:  NPLIQDARFGDEKPKLLPLFS-----PPSSPPTSAGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNR-IPALA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13390.1 unknown protein2.6e-2542.37Show/hide
Query:  MMKQVAVQQNAFSVCEEMLSAAATDRRERLVCPKPRRLGLVNAPVN-----DHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSSTASSPP-YFCGSP
        MM    +QQNAF   E   +AA +DRR+ ++CPKPRR+G +N   +       N      +S + ++ LD +  KGG G    + + T  +PP +F GSP
Subjt:  MMKQVAVQQNAFSVCEEMLSAAATDRRERLVCPKPRRLGLVNAPVN-----DHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSSTASSPP-YFCGSP

Query:  PSRVSNPLIQDARFGDEKPKLLPLFSP-PSSP------PTSAGRKGGCV--RVNFGDNPAVRIEGFDCRLDRESRNR
        PSRVSNPL +D+ F +E   LL + SP PS+P      P S+ R G CV    +FG+NP VR+ GFDC  DR S NR
Subjt:  PSRVSNPLIQDARFGDEKPKLLPLFSP-PSSP------PTSAGRKGGCV--RVNFGDNPAVRIEGFDCRLDRESRNR

AT1G13390.2 unknown protein2.6e-2542.37Show/hide
Query:  MMKQVAVQQNAFSVCEEMLSAAATDRRERLVCPKPRRLGLVNAPVN-----DHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSSTASSPP-YFCGSP
        MM    +QQNAF   E   +AA +DRR+ ++CPKPRR+G +N   +       N      +S + ++ LD +  KGG G    + + T  +PP +F GSP
Subjt:  MMKQVAVQQNAFSVCEEMLSAAATDRRERLVCPKPRRLGLVNAPVN-----DHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSSTASSPP-YFCGSP

Query:  PSRVSNPLIQDARFGDEKPKLLPLFSP-PSSP------PTSAGRKGGCV--RVNFGDNPAVRIEGFDCRLDRESRNR
        PSRVSNPL +D+ F +E   LL + SP PS+P      P S+ R G CV    +FG+NP VR+ GFDC  DR S NR
Subjt:  PSRVSNPLIQDARFGDEKPKLLPLFSP-PSSP------PTSAGRKGGCV--RVNFGDNPAVRIEGFDCRLDRESRNR

AT1G68490.1 unknown protein1.2e-3348.95Show/hide
Query:  MKQVAVQQNAFSVCEEMLSAAAT---DRRERLVCPKPRRLGLVNAPVNDHNP-------FRHRF---DSIAANDALDLLFFKGGYGSENFNSSSTASSPP
        M   AVQ NAF+   ++ S++ +     +  +VCPKPRR+GL N   N H+P       F H+    +S A  D LD++  K GYG+E  N     S  P
Subjt:  MKQVAVQQNAFSVCEEMLSAAAT---DRRERLVCPKPRRLGLVNAPVNDHNP-------FRHRF---DSIAANDALDLLFFKGGYGSENFNSSSTASSPP

Query:  YFCGSPPSRVSNPLIQDARFGDE--------KPKL-LPLFSPPSSPPTSAGRKGGC-VRVNFGDNPAVRIEGFDCRLDRESRN-RIPALA
        + CGSPPSRV+NPL QDARF DE         P+L LP   P SSP +S+GRKGGC VR NFG++P VR+EGFDC LDR+SRN  IPALA
Subjt:  YFCGSPPSRVSNPLIQDARFGDE--------KPKL-LPLFSPPSSPPTSAGRKGGC-VRVNFGDNPAVRIEGFDCRLDRESRN-RIPALA

AT3G02555.1 unknown protein7.8e-2241.52Show/hide
Query:  MKQVAVQQNAFSVCEEMLSAAA--TDRRERLVCPKPRRLGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSSTASSPPYFCGSPPSRVS
        M   ++QQNAF   EE        +   + +VCPKPRR        N   PFR  F    A+D  D    +          S ++ SPP+F GSPPSR +
Subjt:  MKQVAVQQNAFSVCEEMLSAAA--TDRRERLVCPKPRRLGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSSTASSPPYFCGSPPSRVS

Query:  NPLIQDARFGDEKPKLLPLFSPPSSP--PTSAGRKGGCVRVNFGDNPA-VRIEGFDCRLDRESRNRIPALA
        NPL QDARFGDEK   L   SP  SP  P+++  K GC R+ FG  PA VR+EGFDC       + IPA+A
Subjt:  NPLIQDARFGDEKPKLLPLFSPPSSP--PTSAGRKGGCVRVNFGDNPA-VRIEGFDCRLDRESRNRIPALA

AT5G16110.1 unknown protein3.7e-2444.09Show/hide
Query:  MKQVAVQQNAFSVCEEMLSAAATDRRERLVCPKPRRLGL----VNAPVNDH--NPFRHRFDSIAANDALDLLFFKGGYGSENFNSSSTASSPPYFCGSPP
        M    +QQNAF   EEM+     DR++ +VCPKPRR+GL    V  P+  H         DS A  + L+++  K   G+        +SSPPYF GSPP
Subjt:  MKQVAVQQNAFSVCEEMLSAAATDRRERLVCPKPRRLGL----VNAPVNDH--NPFRHRFDSIAANDALDLLFFKGGYGSENFNSSSTASSPPYFCGSPP

Query:  SRVSNPLIQDARFGDEK--------PKLLPL----FSPPSSPPTSAGRKGGCVRVNFG-DNPAVRIEGFDCRLDRESRN-RIPALA
        SR +NPL QDARF DEK        P L P     F  PSS  +S+  + GCVR+ FG ++PAVR+EGFDC L+R+ +N  IPA+A
Subjt:  SRVSNPLIQDARFGDEK--------PKLLPL----FSPPSSPPTSAGRKGGCVRVNFG-DNPAVRIEGFDCRLDRESRN-RIPALA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAGCAGGTGGCGGTTCAACAGAACGCGTTTTCAGTTTGTGAAGAGATGCTGAGCGCCGCCGCCACCGACCGCCGTGAACGGCTGGTTTGCCCAAAACCCCGCCG
TCTCGGACTCGTTAACGCCCCCGTCAACGACCACAACCCATTTAGACACCGTTTTGATTCCATAGCTGCCAACGATGCTCTGGATCTCCTCTTCTTTAAGGGTGGTTATG
GATCGGAGAATTTTAACAGTAGTAGTACAGCCTCGTCGCCGCCGTATTTTTGTGGGTCGCCGCCGAGCAGAGTATCTAACCCATTAATCCAAGACGCTCGATTTGGGGAC
GAGAAGCCCAAGCTGCTCCCCCTCTTCTCCCCTCCGTCGTCACCACCGACCTCCGCCGGTCGGAAGGGAGGCTGTGTTCGGGTGAATTTTGGTGACAATCCCGCCGTGAG
GATCGAGGGTTTCGATTGCCGCCTGGACAGGGAGAGTCGAAACCGTATCCCTGCCCTGGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGAAGCAGGTGGCGGTTCAACAGAACGCGTTTTCAGTTTGTGAAGAGATGCTGAGCGCCGCCGCCACCGACCGCCGTGAACGGCTGGTTTGCCCAAAACCCCGCCG
TCTCGGACTCGTTAACGCCCCCGTCAACGACCACAACCCATTTAGACACCGTTTTGATTCCATAGCTGCCAACGATGCTCTGGATCTCCTCTTCTTTAAGGGTGGTTATG
GATCGGAGAATTTTAACAGTAGTAGTACAGCCTCGTCGCCGCCGTATTTTTGTGGGTCGCCGCCGAGCAGAGTATCTAACCCATTAATCCAAGACGCTCGATTTGGGGAC
GAGAAGCCCAAGCTGCTCCCCCTCTTCTCCCCTCCGTCGTCACCACCGACCTCCGCCGGTCGGAAGGGAGGCTGTGTTCGGGTGAATTTTGGTGACAATCCCGCCGTGAG
GATCGAGGGTTTCGATTGCCGCCTGGACAGGGAGAGTCGAAACCGTATCCCTGCCCTGGCTTAG
Protein sequenceShow/hide protein sequence
MMKQVAVQQNAFSVCEEMLSAAATDRRERLVCPKPRRLGLVNAPVNDHNPFRHRFDSIAANDALDLLFFKGGYGSENFNSSSTASSPPYFCGSPPSRVSNPLIQDARFGD
EKPKLLPLFSPPSSPPTSAGRKGGCVRVNFGDNPAVRIEGFDCRLDRESRNRIPALA