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Spg008539 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008539
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold10:34945706..34949559
RNA-Seq ExpressionSpg008539
SyntenySpg008539
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGTCTTCTTGTTTCTATACGTGGAGATCGAGTCTGATGCTGAGGAGATTGTCAAGCTGATCAATGGCGATTCTATAGATATTTCGGATATTTCGGGATTAATCGA
TGAAATTAGGGAGTTGGCGATGAAGATCAGCATTGTGAAGATCGCCTTCAGCCCGAGATCGTCGAACTTTTTGGCGCACTCTCTTGCGCGCGCTGTTGCTAAAAATAGTG
ATTTTGTTTTTTTCCCTTTTGATCCTTCTCTGTGCTTGAGAATGGATGAGTCGTTGGTGGAGGCTCGTGATAGCCCCAGTTGGTTTTTCCCTTTTTTGGGAGGACAACTC
GACGCGAGCCTAGAAATAGGACCGAAGGATCACCCTGGAGGCGAAACGGGCCAAGGGGTCGGGCCAAGGCCAAAGGGATCGGGCTTTTGGCCCGACCCCATGCTCGACCC
GCTTGCGCGGGCCGAGTTTCTCCGACTCCGTTCGGTCCCTACTGCCTCTGGCCGCCCCGGTTCCGCCTGGTTCGTCCCGAAACGCCTCCGAATTCCTAAAAATCCTAGGA
GCATGAACAGCATCGGAGGCGGTGTGGCAAGCACCACACCGGTGTGCAGGTTTACTGTCTTGCAGGCCACGTCTTCCCCCCTCTCAAACAAATTTACCGTTGGTGCACGT
GAAGGTCAGGTTGATGCGTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGTCTTCTTGTTTCTATACGTGGAGATCGAGTCTGATGCTGAGGAGATTGTCAAGCTGATCAATGGCGATTCTATAGATATTTCGGATATTTCGGGATTAATCGA
TGAAATTAGGGAGTTGGCGATGAAGATCAGCATTGTGAAGATCGCCTTCAGCCCGAGATCGTCGAACTTTTTGGCGCACTCTCTTGCGCGCGCTGTTGCTAAAAATAGTG
ATTTTGTTTTTTTCCCTTTTGATCCTTCTCTGTGCTTGAGAATGGATGAGTCGTTGGTGGAGGCTCGTGATAGCCCCAGTTGGTTTTTCCCTTTTTTGGGAGGACAACTC
GACGCGAGCCTAGAAATAGGACCGAAGGATCACCCTGGAGGCGAAACGGGCCAAGGGGTCGGGCCAAGGCCAAAGGGATCGGGCTTTTGGCCCGACCCCATGCTCGACCC
GCTTGCGCGGGCCGAGTTTCTCCGACTCCGTTCGGTCCCTACTGCCTCTGGCCGCCCCGGTTCCGCCTGGTTCGTCCCGAAACGCCTCCGAATTCCTAAAAATCCTAGGA
GCATGAACAGCATCGGAGGCGGTGTGGCAAGCACCACACCGGTGTGCAGGTTTACTGTCTTGCAGGCCACGTCTTCCCCCCTCTCAAACAAATTTACCGTTGGTGCACGT
GAAGGTCAGGTTGATGCGTTCTAA
Protein sequenceShow/hide protein sequence
MLVFLFLYVEIESDAEEIVKLINGDSIDISDISGLIDEIRELAMKISIVKIAFSPRSSNFLAHSLARAVAKNSDFVFFPFDPSLCLRMDESLVEARDSPSWFFPFLGGQL
DASLEIGPKDHPGGETGQGVGPRPKGSGFWPDPMLDPLARAEFLRLRSVPTASGRPGSAWFVPKRLRIPKNPRSMNSIGGGVASTTPVCRFTVLQATSSPLSNKFTVGAR
EGQVDAF