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Spg008541 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008541
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold10:37144669..37146069
RNA-Seq ExpressionSpg008541
SyntenySpg008541
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146365.1 putative B3 domain-containing protein At2g27410 [Momordica charantia]7.5e-0540.62Show/hide
Query:  MGMGKQKFDVGSRLGIDFPDL-NELYIPRRRRS----------------PTAENSPPMSALKAATVLLAMAYSVTDIQTFCNRKLKKFSNTQKRKK
        MGMG        ++GI F DL N + IP+RRR+                P++  + PMS ++AA VLLAMAYS TD++ FC  +L+K  N++KRK+
Subjt:  MGMGKQKFDVGSRLGIDFPDL-NELYIPRRRRS----------------PTAENSPPMSALKAATVLLAMAYSVTDIQTFCNRKLKKFSNTQKRKK

XP_038875653.1 B3 domain-containing protein At1g05920-like [Benincasa hispida]4.2e-0850Show/hide
Query:  VGSRLGIDFPDLNELYIPRRRRSPTA---------ENSPPMSALKAATVLLAMAYSVTDIQTFCNRKLKKFSNTQKRK
        +G  LG+  PDLN+L IPRRR S  A          + PP+S L+AA VL+A+A SV+D+++FCN +LKK+ NT KRK
Subjt:  VGSRLGIDFPDLNELYIPRRRRSPTA---------ENSPPMSALKAATVLLAMAYSVTDIQTFCNRKLKKFSNTQKRK

XP_038876237.1 putative B3 domain-containing protein At3g24850 [Benincasa hispida]1.7e-0440.7Show/hide
Query:  MGKQKFDVGSRLGIDFPDLNELYIPRRRR---------SPTAENSPPMSALKAATVLLAMAYSVTDIQTFCNRKLKKFSNTQKRKK
        MG  K     R+G+D PDLNE+YIPRRRR          P  E   P++ L+AA +L+ MA  V+D++        +  NT KRKK
Subjt:  MGKQKFDVGSRLGIDFPDLNELYIPRRRR---------SPTAENSPPMSALKAATVLLAMAYSVTDIQTFCNRKLKKFSNTQKRKK

XP_038907053.1 B3 domain-containing protein At2g31420-like [Benincasa hispida]2.8e-0441.56Show/hide
Query:  RLGIDFPDLNELYIPRRRR--------SPTAENSPPMSALKAATVLLAMAYSVTDIQTFCNRKLKKFSNTQKRKKTL
        R+G D PDL+ +YIPR+RR         P  E+  P++ L+AAT+L+ M  SV+D+        +K SNT KRK  L
Subjt:  RLGIDFPDLNELYIPRRRR--------SPTAENSPPMSALKAATVLLAMAYSVTDIQTFCNRKLKKFSNTQKRKKTL

TrEMBL top hitse value%identityAlignment
A0A6J1CX35 putative B3 domain-containing protein At2g274103.6e-0540.62Show/hide
Query:  MGMGKQKFDVGSRLGIDFPDL-NELYIPRRRRS----------------PTAENSPPMSALKAATVLLAMAYSVTDIQTFCNRKLKKFSNTQKRKK
        MGMG        ++GI F DL N + IP+RRR+                P++  + PMS ++AA VLLAMAYS TD++ FC  +L+K  N++KRK+
Subjt:  MGMGKQKFDVGSRLGIDFPDL-NELYIPRRRRS----------------PTAENSPPMSALKAATVLLAMAYSVTDIQTFCNRKLKKFSNTQKRKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATGGGGAAACAAAAATTTGATGTAGGCTCCAGATTGGGGATTGATTTTCCAGATTTAAATGAACTCTACATCCCTCGAAGAAGAAGATCTCCCACTGCTGAAAA
CAGCCCTCCAATGTCTGCATTGAAGGCCGCCACTGTTCTGTTGGCGATGGCCTACTCTGTTACCGATATTCAAACCTTCTGCAATCGCAAATTGAAGAAATTTAGCAACA
CCCAGAAAAGGAAGAAGACTCTGAGAAATCTGAGAGAGAAGAATTTGTTTGAAGAAGTGGAAGATTGGAAGCAACGATGTGTACTGCTTGATGACGCAGTGGAATTCGTT
GGTGGAAGAAAATGCGTTAGAAATTTTATTTTGATTAAATTATGGTTATCCACTTTGGCGTTCTTTGATGCTATGTCAAACCATGGCAATGCTGAAGAACATGGAGTGAT
TGATGCTCGAGATTGCAAGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATGGGGAAACAAAAATTTGATGTAGGCTCCAGATTGGGGATTGATTTTCCAGATTTAAATGAACTCTACATCCCTCGAAGAAGAAGATCTCCCACTGCTGAAAA
CAGCCCTCCAATGTCTGCATTGAAGGCCGCCACTGTTCTGTTGGCGATGGCCTACTCTGTTACCGATATTCAAACCTTCTGCAATCGCAAATTGAAGAAATTTAGCAACA
CCCAGAAAAGGAAGAAGACTCTGAGAAATCTGAGAGAGAAGAATTTGTTTGAAGAAGTGGAAGATTGGAAGCAACGATGTGTACTGCTTGATGACGCAGTGGAATTCGTT
GGTGGAAGAAAATGCGTTAGAAATTTTATTTTGATTAAATTATGGTTATCCACTTTGGCGTTCTTTGATGCTATGTCAAACCATGGCAATGCTGAAGAACATGGAGTGAT
TGATGCTCGAGATTGCAAGAAGTAA
Protein sequenceShow/hide protein sequence
MGMGKQKFDVGSRLGIDFPDLNELYIPRRRRSPTAENSPPMSALKAATVLLAMAYSVTDIQTFCNRKLKKFSNTQKRKKTLRNLREKNLFEEVEDWKQRCVLLDDAVEFV
GGRKCVRNFILIKLWLSTLAFFDAMSNHGNAEEHGVIDARDCKK