; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg008562 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008562
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTranscription factor, TCP
Genome locationscaffold10:32925040..32925831
RNA-Seq ExpressionSpg008562
SyntenySpg008562
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR005333 - Transcription factor, TCP
IPR017887 - Transcription factor TCP subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149871.1 transcription factor TCP21 [Cucumis sativus]1.2e-10681.82Show/hide
Query:  MSASDAA-TNNAAIID--HPQHRHTQQQQHQPNQTSNNGA--LAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPS
        MSASD    NN AIID  H QHRH    Q Q NQ+SNN A  L VKKPPSKDRHSKVDGRGRRIRMPI+CAARVFQLTRELGHKSDGQTIEWLLRQAEPS
Subjt:  MSASDAA-TNNAAIID--HPQHRHTQQQQHQPNQTSNNGA--LAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPS

Query:  IIAATGTGTTPASFSTISASLRGGPTAAASSSSSPSLDHKPLLAPAPFILGKRVRTDDDGGSKD---GGGGGISVGPSVGSIMGPAAAGGYWAIPARPDF
        IIAATGTGTTPASFSTISASLR  P A+ S       DHKPLL PAPFILGKRVRTDDDG +KD   G G GISVGPS+GSIMGPA AGGYWAIPAR DF
Subjt:  IIAATGTGTTPASFSTISASLRGGPTAAASSSSSPSLDHKPLLAPAPFILGKRVRTDDDGGSKD---GGGGGISVGPSVGSIMGPAAAGGYWAIPARPDF

Query:  GQLWSF----AAAAAPEMVIQPAAVSHQASLFVQQQSIGEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDHR
        GQ+WSF    AAAAAPEMVIQP AVSHQASLFVQQQS+GEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDHR
Subjt:  GQLWSF----AAAAAPEMVIQPAAVSHQASLFVQQQSIGEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDHR

XP_022141345.1 transcription factor TCP21-like [Momordica charantia]4.7e-10885.61Show/hide
Query:  MSASDAATNNAAIIDHPQHRHTQQQQHQPNQTSNNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAAT
        MSA++ + NN +IID  +H H QQQ  Q  Q + NG LAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAAT
Subjt:  MSASDAATNNAAIIDHPQHRHTQQQQHQPNQTSNNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAAT

Query:  GTGTTPASFSTISASLRGGPTAAASSSSSPSLDHKPLLAPAPFILGKRVRTDDDGGSKD--GGGGGISVGPSVGSIMGPAAAGGYWAIPARPDFGQLWSF
        GTGTTPASFSTIS SLRG    + S SSS SLDHKPLLAPAPFILGKRVRTDDDGGSKD  GGGGGISVGP+VGSIMGPAAAGGYWAIPARPDFGQ+WSF
Subjt:  GTGTTPASFSTISASLRGGPTAAASSSSSPSLDHKPLLAPAPFILGKRVRTDDDGGSKD--GGGGGISVGPSVGSIMGPAAAGGYWAIPARPDFGQLWSF

Query:  ---AAAAAPEMVIQPAAVSHQASLFVQQQSIGEASAAKVGNYLPGHLNLLASLSGGPGSSGRRD
           AAAAAPEMV+QPAAVSHQASLFVQQQSIGEASAAKVGNYLPGHLNLLASLS GPGSSGRRD
Subjt:  ---AAAAAPEMVIQPAAVSHQASLFVQQQSIGEASAAKVGNYLPGHLNLLASLSGGPGSSGRRD

XP_022938451.1 transcription factor TCP21-like [Cucurbita moschata]1.5e-10680.88Show/hide
Query:  MSASDAAT-NNAAIIDHPQHRHTQQQQHQPNQTSNNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAA
        MS SD    NN AIIDH             +QT+NNG LAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAA
Subjt:  MSASDAAT-NNAAIIDHPQHRHTQQQQHQPNQTSNNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAA

Query:  TGTGTTPASFSTISASLRGGPTAAASSSSSPSLDHKPLLAPAPFILGKRVRTDDDGGSKD------GGGGGISVGPSVGSIMGPAAAGGYWAIPARPDFG
        TGTGTTPASFSTISASLRGG  AA+      SLDHKPLLAPAPFILGKRVRTDDDG +KD      GGGGG+SVG +V S MG AAAGGYWAIP RPDFG
Subjt:  TGTGTTPASFSTISASLRGGPTAAASSSSSPSLDHKPLLAPAPFILGKRVRTDDDGGSKD------GGGGGISVGPSVGSIMGPAAAGGYWAIPARPDFG

Query:  QLWSF--AAAAAPEMVIQPAAVSHQASLFVQQQSIGEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDHR
        Q+WSF  AAAAAPEMVIQP AVSH ASLFVQQQS+GEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDHR
Subjt:  QLWSF--AAAAAPEMVIQPAAVSHQASLFVQQQSIGEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDHR

XP_022990893.1 transcription factor TCP21-like [Cucurbita maxima]1.8e-10781.39Show/hide
Query:  MSASD-AATNNAAIIDHPQHRHTQQQQHQPNQTSNNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAA
        MS SD  A NN AII H Q         Q NQT+NNGAL +KKPP+KDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAA
Subjt:  MSASD-AATNNAAIIDHPQHRHTQQQQHQPNQTSNNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAA

Query:  TGTGTTPASFSTISASLRGGPTAAASSSSSPSLDHKPLLAPAPFILGKRVRTDDDGGSKD----------GGGGGISVGPSVGSIMGPAAAGGYWAIPAR
        TGTGTTPASFSTI ASLRG P A  SSSS  SLDHKPLL PAPFILGKRVR DDD G KD          GGGG ISVGPSVGSIMG AAAGGYWA PAR
Subjt:  TGTGTTPASFSTISASLRGGPTAAASSSSSPSLDHKPLLAPAPFILGKRVRTDDDGGSKD----------GGGGGISVGPSVGSIMGPAAAGGYWAIPAR

Query:  PDFGQLWSFAAAAAPEMVIQPAAVSHQASLFVQQQSIGEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDHR
         DFGQ+WSFAAAAAPEMVIQP A+SHQASLF QQQSIGEASAAKVGNYLPGHLNLLASLSGG GSSGRRDNDHR
Subjt:  PDFGQLWSFAAAAAPEMVIQPAAVSHQASLFVQQQSIGEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDHR

XP_038876310.1 transcription factor TCP21-like [Benincasa hispida]1.3e-11385.98Show/hide
Query:  MSASDAA-TNNAAIIDHPQHRHTQQQQHQPNQTSNNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAA
        MS SD    NN AIIDH Q +   Q Q Q NQ++NNGAL V+KPPSKDRHSKVDGRGRRIRMPI+CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAA
Subjt:  MSASDAA-TNNAAIIDHPQHRHTQQQQHQPNQTSNNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAA

Query:  TGTGTTPASFSTISASLRGGPTAAASSSSSPSLDHKPLLAPAPFILGKRVRTDDDGGSK-DGGGGGISVGPSVGSIMGPAAAGGYWAIPARPDFGQLWSF
        TGTGTTPASFSTISASLRG P  A+SSSS  SLDHKPLLAPAPFILGKRVRTDDDG +K D GGGGISVGP++GSIMGPAA GGYWAIPAR DFGQ+WSF
Subjt:  TGTGTTPASFSTISASLRGGPTAAASSSSSPSLDHKPLLAPAPFILGKRVRTDDDGGSK-DGGGGGISVGPSVGSIMGPAAAGGYWAIPARPDFGQLWSF

Query:  AAAAAPEMVIQPAAVSHQASLFVQQQSIGEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDH
        AAAAAPEMVIQP AVSHQASLFVQQQS+GEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDH
Subjt:  AAAAAPEMVIQPAAVSHQASLFVQQQSIGEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDH

TrEMBL top hitse value%identityAlignment
A0A0A0KMY3 TCP domain-containing protein5.6e-10781.82Show/hide
Query:  MSASDAA-TNNAAIID--HPQHRHTQQQQHQPNQTSNNGA--LAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPS
        MSASD    NN AIID  H QHRH    Q Q NQ+SNN A  L VKKPPSKDRHSKVDGRGRRIRMPI+CAARVFQLTRELGHKSDGQTIEWLLRQAEPS
Subjt:  MSASDAA-TNNAAIID--HPQHRHTQQQQHQPNQTSNNGA--LAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPS

Query:  IIAATGTGTTPASFSTISASLRGGPTAAASSSSSPSLDHKPLLAPAPFILGKRVRTDDDGGSKD---GGGGGISVGPSVGSIMGPAAAGGYWAIPARPDF
        IIAATGTGTTPASFSTISASLR  P A+ S       DHKPLL PAPFILGKRVRTDDDG +KD   G G GISVGPS+GSIMGPA AGGYWAIPAR DF
Subjt:  IIAATGTGTTPASFSTISASLRGGPTAAASSSSSPSLDHKPLLAPAPFILGKRVRTDDDGGSKD---GGGGGISVGPSVGSIMGPAAAGGYWAIPARPDF

Query:  GQLWSF----AAAAAPEMVIQPAAVSHQASLFVQQQSIGEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDHR
        GQ+WSF    AAAAAPEMVIQP AVSHQASLFVQQQS+GEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDHR
Subjt:  GQLWSF----AAAAAPEMVIQPAAVSHQASLFVQQQSIGEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDHR

A0A6J1CHT6 transcription factor TCP21-like2.3e-10885.61Show/hide
Query:  MSASDAATNNAAIIDHPQHRHTQQQQHQPNQTSNNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAAT
        MSA++ + NN +IID  +H H QQQ  Q  Q + NG LAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAAT
Subjt:  MSASDAATNNAAIIDHPQHRHTQQQQHQPNQTSNNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAAT

Query:  GTGTTPASFSTISASLRGGPTAAASSSSSPSLDHKPLLAPAPFILGKRVRTDDDGGSKD--GGGGGISVGPSVGSIMGPAAAGGYWAIPARPDFGQLWSF
        GTGTTPASFSTIS SLRG    + S SSS SLDHKPLLAPAPFILGKRVRTDDDGGSKD  GGGGGISVGP+VGSIMGPAAAGGYWAIPARPDFGQ+WSF
Subjt:  GTGTTPASFSTISASLRGGPTAAASSSSSPSLDHKPLLAPAPFILGKRVRTDDDGGSKD--GGGGGISVGPSVGSIMGPAAAGGYWAIPARPDFGQLWSF

Query:  ---AAAAAPEMVIQPAAVSHQASLFVQQQSIGEASAAKVGNYLPGHLNLLASLSGGPGSSGRRD
           AAAAAPEMV+QPAAVSHQASLFVQQQSIGEASAAKVGNYLPGHLNLLASLS GPGSSGRRD
Subjt:  ---AAAAAPEMVIQPAAVSHQASLFVQQQSIGEASAAKVGNYLPGHLNLLASLSGGPGSSGRRD

A0A6J1E5Y0 transcription factor TCP21-like3.6e-10679.64Show/hide
Query:  MSASDAAT-NNAAIIDHPQHRHTQQQQHQPNQTSNNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAA
        MS SD  + NN AII H         Q     T+NNGAL +KKPP+KDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAA
Subjt:  MSASDAAT-NNAAIIDHPQHRHTQQQQHQPNQTSNNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAA

Query:  TGTGTTPASFSTISASLRGGPTAAASSSSSPSLDHKPLLAPAPFILGKRVRTDDDGGSKD-----------GGGGGISVGPSVGSIMGPAAAGGYWAIPA
        TGTGTTPASFSTI ASLRG P   A+ SSS SLDHKPLL PAPFILGKRVR DDD G KD           GGGG ISVGPSVGSIMG AAAGGYWA PA
Subjt:  TGTGTTPASFSTISASLRGGPTAAASSSSSPSLDHKPLLAPAPFILGKRVRTDDDGGSKD-----------GGGGGISVGPSVGSIMGPAAAGGYWAIPA

Query:  RPDFGQLWSFAAAAAPEMVIQPAAVSHQASLFVQQQSIGEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDHR
        RPDFGQ+WSFAAAAAPEMVIQP A+SHQASLF QQQSIGEASAAKVGNYLPGHLNLLASLSGG GSSGRRDNDHR
Subjt:  RPDFGQLWSFAAAAAPEMVIQPAAVSHQASLFVQQQSIGEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDHR

A0A6J1FD69 transcription factor TCP21-like7.3e-10780.88Show/hide
Query:  MSASDAAT-NNAAIIDHPQHRHTQQQQHQPNQTSNNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAA
        MS SD    NN AIIDH             +QT+NNG LAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAA
Subjt:  MSASDAAT-NNAAIIDHPQHRHTQQQQHQPNQTSNNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAA

Query:  TGTGTTPASFSTISASLRGGPTAAASSSSSPSLDHKPLLAPAPFILGKRVRTDDDGGSKD------GGGGGISVGPSVGSIMGPAAAGGYWAIPARPDFG
        TGTGTTPASFSTISASLRGG  AA+      SLDHKPLLAPAPFILGKRVRTDDDG +KD      GGGGG+SVG +V S MG AAAGGYWAIP RPDFG
Subjt:  TGTGTTPASFSTISASLRGGPTAAASSSSSPSLDHKPLLAPAPFILGKRVRTDDDGGSKD------GGGGGISVGPSVGSIMGPAAAGGYWAIPARPDFG

Query:  QLWSF--AAAAAPEMVIQPAAVSHQASLFVQQQSIGEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDHR
        Q+WSF  AAAAAPEMVIQP AVSH ASLFVQQQS+GEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDHR
Subjt:  QLWSF--AAAAAPEMVIQPAAVSHQASLFVQQQSIGEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDHR

A0A6J1JUL9 transcription factor TCP21-like8.7e-10881.39Show/hide
Query:  MSASD-AATNNAAIIDHPQHRHTQQQQHQPNQTSNNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAA
        MS SD  A NN AII H Q         Q NQT+NNGAL +KKPP+KDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAA
Subjt:  MSASD-AATNNAAIIDHPQHRHTQQQQHQPNQTSNNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAA

Query:  TGTGTTPASFSTISASLRGGPTAAASSSSSPSLDHKPLLAPAPFILGKRVRTDDDGGSKD----------GGGGGISVGPSVGSIMGPAAAGGYWAIPAR
        TGTGTTPASFSTI ASLRG P A  SSSS  SLDHKPLL PAPFILGKRVR DDD G KD          GGGG ISVGPSVGSIMG AAAGGYWA PAR
Subjt:  TGTGTTPASFSTISASLRGGPTAAASSSSSPSLDHKPLLAPAPFILGKRVRTDDDGGSKD----------GGGGGISVGPSVGSIMGPAAAGGYWAIPAR

Query:  PDFGQLWSFAAAAAPEMVIQPAAVSHQASLFVQQQSIGEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDHR
         DFGQ+WSFAAAAAPEMVIQP A+SHQASLF QQQSIGEASAAKVGNYLPGHLNLLASLSGG GSSGRRDNDHR
Subjt:  PDFGQLWSFAAAAAPEMVIQPAAVSHQASLFVQQQSIGEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDHR

SwissProt top hitse value%identityAlignment
Q93Z00 Transcription factor TCP141.6e-2956.3Show/hide
Query:  HRHTQQQQHQPNQTS-----------------NNGALAVKKPP-----SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSI
        H+H Q  Q QP   S                  +  +A KKPP     +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QAEPS+
Subjt:  HRHTQQQQHQPNQTS-----------------NNGALAVKKPP-----SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSI

Query:  IAATGTGTTPASFSTISASLRGGPTAAASSSSSPS
        IAATGTGT PA+F++++ SLR    ++ SS S PS
Subjt:  IAATGTGTTPASFSTISASLRGGPTAAASSSSSPS

Q9C518 Transcription factor TCP84.5e-2963.16Show/hide
Query:  RHTQQQQHQPNQTSNNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLR-G
        R T  +      TS+       K  +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QAEP+I+AATGTGT PA+FST+S SLR  
Subjt:  RHTQQQQHQPNQTSNNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLR-G

Query:  GPTAAASSSSSPSL
        G T +A  S S  L
Subjt:  GPTAAASSSSSPSL

Q9C7G4 Transcription factor TCP222.8e-3157.04Show/hide
Query:  SASDAATNNAAIIDHPQHRHTQQQQHQPNQTSNNGALAV----KKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSII
        S    +  +   I   QH +          TS+  ALAV     K P+KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QAEP+II
Subjt:  SASDAATNNAAIIDHPQHRHTQQQQHQPNQTSNNGALAV----KKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSII

Query:  AATGTGTTPASFSTISASLRGGP-----TAAASSSSSPSLDH
        A+TGTGT PA+FST++ASLR G      + A+ SSSSP   H
Subjt:  AATGTGTTPASFSTISASLRGGP-----TAAASSSSSPSLDH

Q9FMX2 Transcription factor TCP75.8e-6963.82Show/hide
Query:  SNNGAL-------AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGPTAAAS
        S+NGAL        VKKPP+KDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFST S S+RG       
Subjt:  SNNGAL-------AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGPTAAAS

Query:  SSSSPSLDHKP---LLAPAPFILGKRVRTDDDGGSKDGGGGGISVGPSVGSIMGPAAAGGYWAIPARPDFGQLWSFAAAAAPEMVIQPAAVSHQASLFVQ
        +++S SLDHKP   L   +PFILGKRVR D+D  +        SVG        PA   G+WA+PARPDFGQ+WSF  A AP+ +       HQ  LFV 
Subjt:  SSSSPSLDHKP---LLAPAPFILGKRVRTDDDGGSKDGGGGGISVGPSVGSIMGPAAAGGYWAIPARPDFGQLWSFAAAAAPEMVIQPAAVSHQASLFVQ

Query:  QQ-----SIGEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDHR
        QQ     ++GEASAA+VGNYLPGHLNLLASLSGG   S RR+ D R
Subjt:  QQ-----SIGEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDHR

Q9FTA2 Transcription factor TCP212.1e-7159.06Show/hide
Query:  MSASDAATNNAAIIDHPQHRHTQQQQHQPNQTSNNGAL-AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAA
        M+ +D A +N  I++               QTSN G L AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAA
Subjt:  MSASDAATNNAAIIDHPQHRHTQQQQHQPNQTSNNGAL-AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAA

Query:  TGTGTTPASFSTISASLRGGPTAAASSSSSPSLDHKPLLAPAPFILGKRVRTDDDGGSKDGGGGGISVGPSVG-SIMGPAAAGGYWAIPARPDFGQLWSF
        TGTGTTPASFST S S                         +PF LGKRV   ++G S  GGGGG++VG ++G S+MG   +GG+WA+PARPDFGQ+WSF
Subjt:  TGTGTTPASFSTISASLRGGPTAAASSSSSPSLDHKPLLAPAPFILGKRVRTDDDGGSKDGGGGGISVGPSVG-SIMGPAAAGGYWAIPARPDFGQLWSF

Query:  AAAAAPEMVIQPAAVSHQASLFVQQQ-----------SIGEASAAKVGNYLPG-HLNLLASLSGGPGSSGRRDNDH
        A  A PEMV   A     A+LFV+ Q           ++GEASAA+VGNYLPG HLNLLASLSGG   SGRR++DH
Subjt:  AAAAAPEMVIQPAAVSHQASLFVQQQ-----------SIGEASAAKVGNYLPG-HLNLLASLSGGPGSSGRRDNDH

Arabidopsis top hitse value%identityAlignment
AT1G58100.1 TCP family transcription factor3.2e-3063.16Show/hide
Query:  RHTQQQQHQPNQTSNNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLR-G
        R T  +      TS+       K  +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QAEP+I+AATGTGT PA+FST+S SLR  
Subjt:  RHTQQQQHQPNQTSNNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLR-G

Query:  GPTAAASSSSSPSL
        G T +A  S S  L
Subjt:  GPTAAASSSSSPSL

AT1G72010.1 TCP family transcription factor2.0e-3257.04Show/hide
Query:  SASDAATNNAAIIDHPQHRHTQQQQHQPNQTSNNGALAV----KKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSII
        S    +  +   I   QH +          TS+  ALAV     K P+KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QAEP+II
Subjt:  SASDAATNNAAIIDHPQHRHTQQQQHQPNQTSNNGALAV----KKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSII

Query:  AATGTGTTPASFSTISASLRGGP-----TAAASSSSSPSLDH
        A+TGTGT PA+FST++ASLR G      + A+ SSSSP   H
Subjt:  AATGTGTTPASFSTISASLRGGP-----TAAASSSSSPSLDH

AT3G47620.1 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 141.1e-3056.3Show/hide
Query:  HRHTQQQQHQPNQTS-----------------NNGALAVKKPP-----SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSI
        H+H Q  Q QP   S                  +  +A KKPP     +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QAEPS+
Subjt:  HRHTQQQQHQPNQTS-----------------NNGALAVKKPP-----SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSI

Query:  IAATGTGTTPASFSTISASLRGGPTAAASSSSSPS
        IAATGTGT PA+F++++ SLR    ++ SS S PS
Subjt:  IAATGTGTTPASFSTISASLRGGPTAAASSSSSPS

AT5G08330.1 TCP family transcription factor1.5e-7259.06Show/hide
Query:  MSASDAATNNAAIIDHPQHRHTQQQQHQPNQTSNNGAL-AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAA
        M+ +D A +N  I++               QTSN G L AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAA
Subjt:  MSASDAATNNAAIIDHPQHRHTQQQQHQPNQTSNNGAL-AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAA

Query:  TGTGTTPASFSTISASLRGGPTAAASSSSSPSLDHKPLLAPAPFILGKRVRTDDDGGSKDGGGGGISVGPSVG-SIMGPAAAGGYWAIPARPDFGQLWSF
        TGTGTTPASFST S S                         +PF LGKRV   ++G S  GGGGG++VG ++G S+MG   +GG+WA+PARPDFGQ+WSF
Subjt:  TGTGTTPASFSTISASLRGGPTAAASSSSSPSLDHKPLLAPAPFILGKRVRTDDDGGSKDGGGGGISVGPSVG-SIMGPAAAGGYWAIPARPDFGQLWSF

Query:  AAAAAPEMVIQPAAVSHQASLFVQQQ-----------SIGEASAAKVGNYLPG-HLNLLASLSGGPGSSGRRDNDH
        A  A PEMV   A     A+LFV+ Q           ++GEASAA+VGNYLPG HLNLLASLSGG   SGRR++DH
Subjt:  AAAAAPEMVIQPAAVSHQASLFVQQQ-----------SIGEASAAKVGNYLPG-HLNLLASLSGGPGSSGRRDNDH

AT5G23280.1 TCP family transcription factor4.2e-7063.82Show/hide
Query:  SNNGAL-------AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGPTAAAS
        S+NGAL        VKKPP+KDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFST S S+RG       
Subjt:  SNNGAL-------AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGPTAAAS

Query:  SSSSPSLDHKP---LLAPAPFILGKRVRTDDDGGSKDGGGGGISVGPSVGSIMGPAAAGGYWAIPARPDFGQLWSFAAAAAPEMVIQPAAVSHQASLFVQ
        +++S SLDHKP   L   +PFILGKRVR D+D  +        SVG        PA   G+WA+PARPDFGQ+WSF  A AP+ +       HQ  LFV 
Subjt:  SSSSPSLDHKP---LLAPAPFILGKRVRTDDDGGSKDGGGGGISVGPSVGSIMGPAAAGGYWAIPARPDFGQLWSFAAAAAPEMVIQPAAVSHQASLFVQ

Query:  QQ-----SIGEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDHR
        QQ     ++GEASAA+VGNYLPGHLNLLASLSGG   S RR+ D R
Subjt:  QQ-----SIGEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDHR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGCCTCCGACGCCGCCACCAACAATGCCGCCATAATCGACCATCCCCAACACAGACATACCCAACAACAACAGCACCAACCAAATCAGACTTCCAACAATGGCGC
TTTGGCCGTCAAGAAACCCCCCTCCAAGGACCGCCACAGCAAGGTCGACGGCCGCGGCCGCCGTATTCGTATGCCCATCATCTGCGCCGCTCGCGTCTTCCAACTCACCC
GCGAGTTGGGCCACAAATCCGACGGCCAGACCATCGAGTGGCTCCTCCGTCAAGCCGAGCCCTCCATCATCGCCGCCACTGGCACCGGCACCACTCCCGCTAGCTTCTCC
ACTATCTCCGCCTCCCTCCGCGGCGGTCCCACTGCCGCCGCTTCCTCTTCTTCCTCCCCTTCTCTCGACCACAAGCCGCTTCTCGCTCCGGCGCCCTTCATTCTCGGCAA
GCGCGTCAGGACCGACGACGATGGAGGTAGTAAAGACGGCGGTGGCGGTGGCATTTCGGTTGGACCCTCTGTCGGTTCGATTATGGGTCCGGCTGCCGCGGGTGGGTACT
GGGCGATTCCTGCGAGGCCTGATTTCGGACAGTTGTGGAGCTTCGCCGCCGCCGCGGCTCCCGAGATGGTGATTCAGCCGGCGGCGGTTTCTCATCAGGCGTCGCTGTTC
GTTCAACAGCAATCGATCGGAGAGGCGTCGGCGGCGAAAGTGGGAAATTACCTCCCGGGGCATCTGAATTTGCTCGCTTCTTTATCGGGTGGACCGGGAAGTTCCGGCCG
GAGAGATAACGACCACCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCGCCTCCGACGCCGCCACCAACAATGCCGCCATAATCGACCATCCCCAACACAGACATACCCAACAACAACAGCACCAACCAAATCAGACTTCCAACAATGGCGC
TTTGGCCGTCAAGAAACCCCCCTCCAAGGACCGCCACAGCAAGGTCGACGGCCGCGGCCGCCGTATTCGTATGCCCATCATCTGCGCCGCTCGCGTCTTCCAACTCACCC
GCGAGTTGGGCCACAAATCCGACGGCCAGACCATCGAGTGGCTCCTCCGTCAAGCCGAGCCCTCCATCATCGCCGCCACTGGCACCGGCACCACTCCCGCTAGCTTCTCC
ACTATCTCCGCCTCCCTCCGCGGCGGTCCCACTGCCGCCGCTTCCTCTTCTTCCTCCCCTTCTCTCGACCACAAGCCGCTTCTCGCTCCGGCGCCCTTCATTCTCGGCAA
GCGCGTCAGGACCGACGACGATGGAGGTAGTAAAGACGGCGGTGGCGGTGGCATTTCGGTTGGACCCTCTGTCGGTTCGATTATGGGTCCGGCTGCCGCGGGTGGGTACT
GGGCGATTCCTGCGAGGCCTGATTTCGGACAGTTGTGGAGCTTCGCCGCCGCCGCGGCTCCCGAGATGGTGATTCAGCCGGCGGCGGTTTCTCATCAGGCGTCGCTGTTC
GTTCAACAGCAATCGATCGGAGAGGCGTCGGCGGCGAAAGTGGGAAATTACCTCCCGGGGCATCTGAATTTGCTCGCTTCTTTATCGGGTGGACCGGGAAGTTCCGGCCG
GAGAGATAACGACCACCGTTGA
Protein sequenceShow/hide protein sequence
MSASDAATNNAAIIDHPQHRHTQQQQHQPNQTSNNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFS
TISASLRGGPTAAASSSSSPSLDHKPLLAPAPFILGKRVRTDDDGGSKDGGGGGISVGPSVGSIMGPAAAGGYWAIPARPDFGQLWSFAAAAAPEMVIQPAAVSHQASLF
VQQQSIGEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDHR