; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg008574 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008574
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationscaffold10:36297370..36303566
RNA-Seq ExpressionSpg008574
SyntenySpg008574
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.6e-3033.58Show/hide
Query:  WNPISREESDSLIRPF--SEEEVLQNLKSMGRNKSPNPDGNQKPRRLYRLHSQCLCFIVGMTIFSGSIVRMEPSQLPLPHFSSGLKIPPRLSTWNLRPFS
        WNP S +    + RP    EE +  N+K+      PN  G+ KP  L+ L+S          IF  + V+   ++ P+    S     P L       + 
Subjt:  WNPISREESDSLIRPF--SEEEVLQNLKSMGRNKSPNPDGNQKPRRLYRLHSQCLCFIVGMTIFSGSIVRMEPSQLPLPHFSSGLKIPPRLSTWNLRPFS

Query:  NLWGAAIPKKIKFFIWTVLHRRINTANILQAVFKNFAFSPSCCILCYSHSETLDHILIHCPLASNFW---QSLHGASGVHFPAQAMAHNFCEETFYRKGN
         LW    PKK KFFIWT++H  INTA+ LQ    N+  SP+ C +C    E ++H+ IHCP +   W   ++L   +      Q++  N C         
Subjt:  NLWGAAIPKKIKFFIWTVLHRRINTANILQAVFKNFAFSPSCCILCYSHSETLDHILIHCPLASNFW---QSLHGASGVHFPAQAMAHNFCEETFYRKGN

Query:  SQRSIIIQAISAAILWSLWTERNSRICKNLSRSTSQIWEDIIANASYWVSSSKLFANYDAFSIALNWKAFL
        +Q+ +I    +A ILW +W ERN+RI K   ++   +WED +A    W   SKLF+NYD  SIALN  AF+
Subjt:  SQRSIIIQAISAAILWSLWTERNSRICKNLSRSTSQIWEDIIANASYWVSSSKLFANYDAFSIALNWKAFL

KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]6.8e-2142.37Show/hide
Query:  ELRYLRQRCKNLWLKNGDENTSFFHKVCSARSRWSFISELVSANGLSLVSDMQIEREVIKYFSNIYKDNNSASRMVSNLDWNPISREESDSLIRPFSEEE
        E +   Q+CK +W+  GDEN+SFFHK+C+AR +   IS++++ +G + ++D  I    I++F +IY DN ++   + NLDW PIS   S+ L +PF+E E
Subjt:  ELRYLRQRCKNLWLKNGDENTSFFHKVCSARSRWSFISELVSANGLSLVSDMQIEREVIKYFSNIYKDNNSASRMVSNLDWNPISREESDSLIRPFSEEE

Query:  VLQNLKSMGRNKSPNPDG
        +   LKS  +NK+P PDG
Subjt:  VLQNLKSMGRNKSPNPDG

KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.1e-3029.01Show/hide
Query:  SARSRWSFISELVSANGLSLVSDMQIEREVIKYFSNIYKDNNSASRMVSNLDWNPISREESDSLIRPFSEEEVLQNLKSMGRNKSPNPDGNQKP--RRLY
        S+R +   IS++++ +G + ++D  I    I++F  IY DN ++   + NLDW PIS   S  L +PF+E E+   LKS  +NK+P PDG      ++ +
Subjt:  SARSRWSFISELVSANGLSLVSDMQIEREVIKYFSNIYKDNNSASRMVSNLDWNPISREESDSLIRPFSEEEVLQNLKSMGRNKSPNPDGNQKP--RRLY

Query:  RLHSQCLCFI-------------VGMTIFS--------GSIVRMEPSQLPLPHFSSGLK-IPPRL-----STWNLRPFSNLWGAAIPKKI-----KFFIW
            Q +C I             V  T+ +         ++    P  L    +    K +  RL      T +    + + G  I + I         W
Subjt:  RLHSQCLCFI-------------VGMTIFS--------GSIVRMEPSQLPLPHFSSGLK-IPPRL-----STWNLRPFSNLWGAAIPKKI-----KFFIW

Query:  TVLHRRINTANILQAVFKNFAFSPSCCILCYSHSETLDHILIHCPLASNFW---QSLHGASGVHFPAQAMAHNFCEETFYRKGNSQRSIIIQAISAAILW
             R++    LQ    N+A SP+   +C    E ++H+ IHCP +   W   ++L   +      Q++A N C         +Q+ +I    SA +LW
Subjt:  TVLHRRINTANILQAVFKNFAFSPSCCILCYSHSETLDHILIHCPLASNFW---QSLHGASGVHFPAQAMAHNFCEETFYRKGNSQRSIIIQAISAAILW

Query:  SLWTERNSRICKNLSRSTSQIWEDIIANASYWVSSSKLFANYDAFSIALNWKAFL
         +W ERN+RI K   + +  +WEDI+A    W   SKLF+NYD  SIALN  AF+
Subjt:  SLWTERNSRICKNLSRSTSQIWEDIIANASYWVSSSKLFANYDAFSIALNWKAFL

KAA0041397.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]9.8e-2040.48Show/hide
Query:  NLHHATSQELRYLRQRCKNLWLKNGDENTSFFHKVCSARSRWSFISELVSANGLSLVSDMQIEREVIKYFSNIYKDNNSASRMVSNLDWNPISREESDSL
        +L   T  E +   Q+CK +W+  GDEN+SFFHK+C+AR +   IS++++  G + ++D  I    I++F  IY DN ++   + NLDW PIS      L
Subjt:  NLHHATSQELRYLRQRCKNLWLKNGDENTSFFHKVCSARSRWSFISELVSANGLSLVSDMQIEREVIKYFSNIYKDNNSASRMVSNLDWNPISREESDSL

Query:  IRPFSEEEVLQNLKSMGRNKSPNPDG
         +PF+E E+   LKS  +NK+P PDG
Subjt:  IRPFSEEEVLQNLKSMGRNKSPNPDG

KAA0041397.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.1e-2639.77Show/hide
Query:  FSNLWGAAIPKKIKFFIWTVLHRRINTANILQAVFKNFAFSPSCCILCYSHSETLDHILIHCPLASNFWQSL--HGASGVHFPAQAMAHNFCEETFYRKG
        F NLW  +IPKK  FFIWT+L+  +NTA  L     N    PS C++C  + E   H+ I CP+A + W+S+  H +S V+          C      K 
Subjt:  FSNLWGAAIPKKIKFFIWTVLHRRINTANILQAVFKNFAFSPSCCILCYSHSETLDHILIHCPLASNFWQSL--HGASGVHFPAQAMAHNFCEETFYRKG

Query:  NSQRSIIIQAISAAILWSLWTERNSRICKNLSRSTSQIWEDIIANASYWVSSSKLFANYDAFSIALNWKAF
         +++++I+    A+ LW++W ERN+RI     ++ ++IWEDI A A  W S S LF+NY A SIALN  AF
Subjt:  NSQRSIIIQAISAAILWSLWTERNSRICKNLSRSTSQIWEDIIANASYWVSSSKLFANYDAFSIALNWKAF

KAA0044556.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.7e-2838.46Show/hide
Query:  STWNLRP--FSNLWGAAIPKKIKFFIWTVLHRRINTANILQAVFKNFAFSPSCCILCYSHSETLDHILIHCPLASNFW---QSLHGASGVHFPAQAMAHN
        S  N  P  +  LW    PKK KFFIWT++H  INTA+ LQ    N+  SP+ C +C    E ++H+ IHCP +   W   Q+L   +      +++A N
Subjt:  STWNLRP--FSNLWGAAIPKKIKFFIWTVLHRRINTANILQAVFKNFAFSPSCCILCYSHSETLDHILIHCPLASNFW---QSLHGASGVHFPAQAMAHN

Query:  FCEETFYRKGNSQRSIIIQAISAAILWSLWTERNSRICKNLSRSTSQIWEDIIANASYWVSSSKLFANYDAFSIALNWKAFL
         C         +Q+ +I     A +LW +W ERN+RI K   +    +WEDI+A    W   SKLF+NYD  SIALN  AF+
Subjt:  FCEETFYRKGNSQRSIIIQAISAAILWSLWTERNSRICKNLSRSTSQIWEDIIANASYWVSSSKLFANYDAFSIALNWKAFL

KAA0044556.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]4.1e-1838.1Show/hide
Query:  NLHHATSQELRYLRQRCKNLWLKNGDENTSFFHKVCSARSRWSFISELVSANGLSLVSDMQIEREVIKYFSNIYKDNNSASRMVSNLDWNPISREESDSL
        +L   T  + +   Q+CK +W+  GDEN+SFFHK+C+ R +   IS++++  G + ++D  I    I++F  IY DN ++   + N DW PIS      L
Subjt:  NLHHATSQELRYLRQRCKNLWLKNGDENTSFFHKVCSARSRWSFISELVSANGLSLVSDMQIEREVIKYFSNIYKDNNSASRMVSNLDWNPISREESDSL

Query:  IRPFSEEEVLQNLKSMGRNKSPNPDG
         +PF+E E+   LKS  +NK+P PDG
Subjt:  IRPFSEEEVLQNLKSMGRNKSPNPDG

KAA0044556.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.7e-2838.46Show/hide
Query:  STWNLRP--FSNLWGAAIPKKIKFFIWTVLHRRINTANILQAVFKNFAFSPSCCILCYSHSETLDHILIHCPLASNFW---QSLHGASGVHFPAQAMAHN
        S  N  P  +  LW    PKK KFFIWT++H  INTA+ LQ    N+  SP+ C +C    E ++H+ IHCP +   W   Q+L   +      +++A N
Subjt:  STWNLRP--FSNLWGAAIPKKIKFFIWTVLHRRINTANILQAVFKNFAFSPSCCILCYSHSETLDHILIHCPLASNFW---QSLHGASGVHFPAQAMAHN

Query:  FCEETFYRKGNSQRSIIIQAISAAILWSLWTERNSRICKNLSRSTSQIWEDIIANASYWVSSSKLFANYDAFSIALNWKAFL
         C         +Q+ +I     A +LW +W ERN+RI K   +    +WEDI+A    W   SKLF+NYD  SIALN  AF+
Subjt:  FCEETFYRKGNSQRSIIIQAISAAILWSLWTERNSRICKNLSRSTSQIWEDIIANASYWVSSSKLFANYDAFSIALNWKAFL

XP_016902461.1 PREDICTED: LINE-1 retrotransposable element ORF2 protein [Cucumis melo]1.2e-1741.67Show/hide
Query:  QELRYLRQRCKNLWLKNGDENTSFFHKVCSARSRWSFISELVSANGLSLVSDMQIEREVIKYFSNIYKDNNSASR-MVSNLDWNPISREESDSLIRPFSE
        +E +   Q+ K LW+  GDENTSFFHK+CSAR R S IS + S +G+   ++  I +  + +F +IYK     S  ++ NL+W+PIS  ++ +L   F+E
Subjt:  QELRYLRQRCKNLWLKNGDENTSFFHKVCSARSRWSFISELVSANGLSLVSDMQIEREVIKYFSNIYKDNNSASR-MVSNLDWNPISREESDSLIRPFSE

Query:  EEVLQNLKSMGRNKSPNPDG
        EE+ + L +   NKSP PDG
Subjt:  EEVLQNLKSMGRNKSPNPDG

TrEMBL top hitse value%identityAlignment
A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein7.8e-3133.58Show/hide
Query:  WNPISREESDSLIRPF--SEEEVLQNLKSMGRNKSPNPDGNQKPRRLYRLHSQCLCFIVGMTIFSGSIVRMEPSQLPLPHFSSGLKIPPRLSTWNLRPFS
        WNP S +    + RP    EE +  N+K+      PN  G+ KP  L+ L+S          IF  + V+   ++ P+    S     P L       + 
Subjt:  WNPISREESDSLIRPF--SEEEVLQNLKSMGRNKSPNPDGNQKPRRLYRLHSQCLCFIVGMTIFSGSIVRMEPSQLPLPHFSSGLKIPPRLSTWNLRPFS

Query:  NLWGAAIPKKIKFFIWTVLHRRINTANILQAVFKNFAFSPSCCILCYSHSETLDHILIHCPLASNFW---QSLHGASGVHFPAQAMAHNFCEETFYRKGN
         LW    PKK KFFIWT++H  INTA+ LQ    N+  SP+ C +C    E ++H+ IHCP +   W   ++L   +      Q++  N C         
Subjt:  NLWGAAIPKKIKFFIWTVLHRRINTANILQAVFKNFAFSPSCCILCYSHSETLDHILIHCPLASNFW---QSLHGASGVHFPAQAMAHNFCEETFYRKGN

Query:  SQRSIIIQAISAAILWSLWTERNSRICKNLSRSTSQIWEDIIANASYWVSSSKLFANYDAFSIALNWKAFL
        +Q+ +I    +A ILW +W ERN+RI K   ++   +WED +A    W   SKLF+NYD  SIALN  AF+
Subjt:  SQRSIIIQAISAAILWSLWTERNSRICKNLSRSTSQIWEDIIANASYWVSSSKLFANYDAFSIALNWKAFL

A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein3.3e-2142.37Show/hide
Query:  ELRYLRQRCKNLWLKNGDENTSFFHKVCSARSRWSFISELVSANGLSLVSDMQIEREVIKYFSNIYKDNNSASRMVSNLDWNPISREESDSLIRPFSEEE
        E +   Q+CK +W+  GDEN+SFFHK+C+AR +   IS++++ +G + ++D  I    I++F +IY DN ++   + NLDW PIS   S+ L +PF+E E
Subjt:  ELRYLRQRCKNLWLKNGDENTSFFHKVCSARSRWSFISELVSANGLSLVSDMQIEREVIKYFSNIYKDNNSASRMVSNLDWNPISREESDSLIRPFSEEE

Query:  VLQNLKSMGRNKSPNPDG
        +   LKS  +NK+P PDG
Subjt:  VLQNLKSMGRNKSPNPDG

A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein1.0e-3029.01Show/hide
Query:  SARSRWSFISELVSANGLSLVSDMQIEREVIKYFSNIYKDNNSASRMVSNLDWNPISREESDSLIRPFSEEEVLQNLKSMGRNKSPNPDGNQKP--RRLY
        S+R +   IS++++ +G + ++D  I    I++F  IY DN ++   + NLDW PIS   S  L +PF+E E+   LKS  +NK+P PDG      ++ +
Subjt:  SARSRWSFISELVSANGLSLVSDMQIEREVIKYFSNIYKDNNSASRMVSNLDWNPISREESDSLIRPFSEEEVLQNLKSMGRNKSPNPDGNQKP--RRLY

Query:  RLHSQCLCFI-------------VGMTIFS--------GSIVRMEPSQLPLPHFSSGLK-IPPRL-----STWNLRPFSNLWGAAIPKKI-----KFFIW
            Q +C I             V  T+ +         ++    P  L    +    K +  RL      T +    + + G  I + I         W
Subjt:  RLHSQCLCFI-------------VGMTIFS--------GSIVRMEPSQLPLPHFSSGLK-IPPRL-----STWNLRPFSNLWGAAIPKKI-----KFFIW

Query:  TVLHRRINTANILQAVFKNFAFSPSCCILCYSHSETLDHILIHCPLASNFW---QSLHGASGVHFPAQAMAHNFCEETFYRKGNSQRSIIIQAISAAILW
             R++    LQ    N+A SP+   +C    E ++H+ IHCP +   W   ++L   +      Q++A N C         +Q+ +I    SA +LW
Subjt:  TVLHRRINTANILQAVFKNFAFSPSCCILCYSHSETLDHILIHCPLASNFW---QSLHGASGVHFPAQAMAHNFCEETFYRKGNSQRSIIIQAISAAILW

Query:  SLWTERNSRICKNLSRSTSQIWEDIIANASYWVSSSKLFANYDAFSIALNWKAFL
         +W ERN+RI K   + +  +WEDI+A    W   SKLF+NYD  SIALN  AF+
Subjt:  SLWTERNSRICKNLSRSTSQIWEDIIANASYWVSSSKLFANYDAFSIALNWKAFL

A0A5A7TIB8 LINE-1 retrotransposable element ORF2 protein2.8e-2838.46Show/hide
Query:  STWNLRP--FSNLWGAAIPKKIKFFIWTVLHRRINTANILQAVFKNFAFSPSCCILCYSHSETLDHILIHCPLASNFW---QSLHGASGVHFPAQAMAHN
        S  N  P  +  LW    PKK KFFIWT++H  INTA+ LQ    N+  SP+ C +C    E ++H+ IHCP +   W   Q+L   +      +++A N
Subjt:  STWNLRP--FSNLWGAAIPKKIKFFIWTVLHRRINTANILQAVFKNFAFSPSCCILCYSHSETLDHILIHCPLASNFW---QSLHGASGVHFPAQAMAHN

Query:  FCEETFYRKGNSQRSIIIQAISAAILWSLWTERNSRICKNLSRSTSQIWEDIIANASYWVSSSKLFANYDAFSIALNWKAFL
         C         +Q+ +I     A +LW +W ERN+RI K   +    +WEDI+A    W   SKLF+NYD  SIALN  AF+
Subjt:  FCEETFYRKGNSQRSIIIQAISAAILWSLWTERNSRICKNLSRSTSQIWEDIIANASYWVSSSKLFANYDAFSIALNWKAFL

A0A5A7TIB8 LINE-1 retrotransposable element ORF2 protein4.8e-2040.48Show/hide
Query:  NLHHATSQELRYLRQRCKNLWLKNGDENTSFFHKVCSARSRWSFISELVSANGLSLVSDMQIEREVIKYFSNIYKDNNSASRMVSNLDWNPISREESDSL
        +L   T  E +   Q+CK +W+  GDEN+SFFHK+C+AR +   IS++++  G + ++D  I    I++F  IY DN ++   + NLDW PIS      L
Subjt:  NLHHATSQELRYLRQRCKNLWLKNGDENTSFFHKVCSARSRWSFISELVSANGLSLVSDMQIEREVIKYFSNIYKDNNSASRMVSNLDWNPISREESDSL

Query:  IRPFSEEEVLQNLKSMGRNKSPNPDG
         +PF+E E+   LKS  +NK+P PDG
Subjt:  IRPFSEEEVLQNLKSMGRNKSPNPDG

A0A5A7TIB8 LINE-1 retrotransposable element ORF2 protein2.8e-2838.46Show/hide
Query:  STWNLRP--FSNLWGAAIPKKIKFFIWTVLHRRINTANILQAVFKNFAFSPSCCILCYSHSETLDHILIHCPLASNFW---QSLHGASGVHFPAQAMAHN
        S  N  P  +  LW    PKK KFFIWT++H  INTA+ LQ    N+  SP+ C +C    E ++H+ IHCP +   W   Q+L   +      +++A N
Subjt:  STWNLRP--FSNLWGAAIPKKIKFFIWTVLHRRINTANILQAVFKNFAFSPSCCILCYSHSETLDHILIHCPLASNFW---QSLHGASGVHFPAQAMAHN

Query:  FCEETFYRKGNSQRSIIIQAISAAILWSLWTERNSRICKNLSRSTSQIWEDIIANASYWVSSSKLFANYDAFSIALNWKAFL
         C         +Q+ +I     A +LW +W ERN+RI K   +    +WEDI+A    W   SKLF+NYD  SIALN  AF+
Subjt:  FCEETFYRKGNSQRSIIIQAISAAILWSLWTERNSRICKNLSRSTSQIWEDIIANASYWVSSSKLFANYDAFSIALNWKAFL

A0A5A7TR15 LINE-1 retrotransposable element ORF2 protein2.0e-1838.1Show/hide
Query:  NLHHATSQELRYLRQRCKNLWLKNGDENTSFFHKVCSARSRWSFISELVSANGLSLVSDMQIEREVIKYFSNIYKDNNSASRMVSNLDWNPISREESDSL
        +L   T  + +   Q+CK +W+  GDEN+SFFHK+C+ R +   IS++++  G + ++D  I    I++F  IY DN ++   + N DW PIS      L
Subjt:  NLHHATSQELRYLRQRCKNLWLKNGDENTSFFHKVCSARSRWSFISELVSANGLSLVSDMQIEREVIKYFSNIYKDNNSASRMVSNLDWNPISREESDSL

Query:  IRPFSEEEVLQNLKSMGRNKSPNPDG
         +PF+E E+   LKS  +NK+P PDG
Subjt:  IRPFSEEEVLQNLKSMGRNKSPNPDG

A0A5A7TR15 LINE-1 retrotransposable element ORF2 protein1.5e-2639.77Show/hide
Query:  FSNLWGAAIPKKIKFFIWTVLHRRINTANILQAVFKNFAFSPSCCILCYSHSETLDHILIHCPLASNFWQSL--HGASGVHFPAQAMAHNFCEETFYRKG
        F NLW  +IPKK  FFIWT+L+  +NTA  L     N    PS C++C  + E   H+ I CP+A + W+S+  H +S V+          C      K 
Subjt:  FSNLWGAAIPKKIKFFIWTVLHRRINTANILQAVFKNFAFSPSCCILCYSHSETLDHILIHCPLASNFWQSL--HGASGVHFPAQAMAHNFCEETFYRKG

Query:  NSQRSIIIQAISAAILWSLWTERNSRICKNLSRSTSQIWEDIIANASYWVSSSKLFANYDAFSIALNWKAF
         +++++I+    A+ LW++W ERN+RI     ++ ++IWEDI A A  W S S LF+NY A SIALN  AF
Subjt:  NSQRSIIIQAISAAILWSLWTERNSRICKNLSRSTSQIWEDIIANASYWVSSSKLFANYDAFSIALNWKAF

A0A5D3DM72 LINE-1 retrotransposable element ORF2 protein5.8e-1841.67Show/hide
Query:  QELRYLRQRCKNLWLKNGDENTSFFHKVCSARSRWSFISELVSANGLSLVSDMQIEREVIKYFSNIYKDNNSASR-MVSNLDWNPISREESDSLIRPFSE
        +E +   Q+ K LW+  GDENTSFFHK+CSAR R S IS + S +G+   ++  I +  + +F +IYK     S  ++ NL+W+PIS  ++ +L   F+E
Subjt:  QELRYLRQRCKNLWLKNGDENTSFFHKVCSARSRWSFISELVSANGLSLVSDMQIEREVIKYFSNIYKDNNSASR-MVSNLDWNPISREESDSLIRPFSE

Query:  EEVLQNLKSMGRNKSPNPDG
        EE+ + L +   NKSP PDG
Subjt:  EEVLQNLKSMGRNKSPNPDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein1.6e-0426.05Show/hide
Query:  YLRQRCKNLWLKNGDENTSFFHKVCSARSRWSFISELVSANGLSLVSDMQIEREVIKYFSNIY---KDNNSASRMVSNLDWNPISREE--SDSLIRPFSE
        + RQ+ +  WL++GD NT FFHKV  A    + I  L   + + + +  Q++  ++ Y++++     D  +   +    D +P    +  +  L    S+
Subjt:  YLRQRCKNLWLKNGDENTSFFHKVCSARSRWSFISELVSANGLSLVSDMQIEREVIKYFSNIY---KDNNSASRMVSNLDWNPISREE--SDSLIRPFSE

Query:  EEVLQNLKSMGRNKSPNPD
        +E+   + +M RNK+P PD
Subjt:  EEVLQNLKSMGRNKSPNPD

AT4G04650.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein6.4e-0928.24Show/hide
Query:  KIKFFIWTVLHRRINTANILQAVFKNFAFS-PSCCILCYSHSETLDHILIHCPLASNFWQSLHGASGVHFPAQAMAHNFCEETFYRKGNSQR-SIIIQAI
        K  F  W V   R++T + LQ    N+  S P+ C+LC +H ++  H+   C  +   W+    ++ ++ PAQ M    C          +   +II+  
Subjt:  KIKFFIWTVLHRRINTANILQAVFKNFAFS-PSCCILCYSHSETLDHILIHCPLASNFWQSLHGASGVHFPAQAMAHNFCEETFYRKGNSQR-SIIIQAI

Query:  SAAILWSLWTERNSRICKNLSRSTSQIWEDI
          + ++++W ERN R+   +SRST  I +DI
Subjt:  SAAILWSLWTERNSRICKNLSRSTSQIWEDI

AT4G29090.1 Ribonuclease H-like superfamily protein4.3e-0524.84Show/hide
Query:  PPRLSTWNLRP-FSNLWGAAIPKKIKFFIWTVLHRRINTANILQAVFKNFAFSPSCCILCYSHSETLDHILIHCPLASNFWQSLHGASGVHFP-----AQ
        P  +S  +L P +  +W +    KI+ F+W  L   +  A  L   +++ +   S CI C S  ET++H+L  C  A   W      S +  P     A 
Subjt:  PPRLSTWNLRP-FSNLWGAAIPKKIKFFIWTVLHRRINTANILQAVFKNFAFSPSCCILCYSHSETLDHILIHCPLASNFWQSLHGASGVHFP-----AQ

Query:  AMAHNFCEETFYRKGNSQRSIIIQAISAAILWSLWTERNSRICKNLSRSTSQI
        ++  N         GN Q     Q +   +LW LW  RN  + +    +  ++
Subjt:  AMAHNFCEETFYRKGNSQRSIIIQAISAAILWSLWTERNSRICKNLSRSTSQI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGATATGCCTGAGAACCACCAGAATTACAATGTCCGACGAGCTCAACTGACACCACCATCGGCACCGCCATGTCCTTGGCGCTTTGCAGGATGGACTTACCGCAT
CGCCTTCCAGTATCTAGTTTATATCTTCCTCCTCAAATCCTCCGCAGTAGTCCACGCCGTTCAGATACCTACGCCAAAACGGAAGGAGAGCAAGAGAGCAAGGGGAGAAG
TCGAGAATGAAGTTCGGGATCCCTTCTTCAGTGATGAAGATGGGTTTAAATACCTGCTCATGCTCCTAGGGTTTTTAAGAATTCGGAGGCGATTCAGGCTGAACCGAGTG
AAACCGAGGCAGCCGAGGGCATCAGAGACCGAACGGAGGCGGAAGAGCTCGGCCGAGGTCCAAGGCCGAGGCCGAGCAGGGGGTCGGGCCAAAAGCCCGATCCCTTCGGC
TTTGGCCCGACCCTTTGGCCTGTTCTTCCTTCGGGTTCCGTTTCCTAGCTGTCTCCTTGGGCTGGTATCGTGCTGCCCTCATCAATTCCTTACATATCGGAATCTCCATC
ATGCAACCTCTCAAGAATTAAGATATCTCAGACAACGCTGTAAAAATCTATGGCTTAAGAATGGTGATGAAAATACTTCTTTTTTTCATAAAGTGTGCTCGGCTCGCAGT
AGATGGAGTTTTATATCTGAATTGGTCTCAGCGAATGGTCTCAGTTTAGTCTCGGATATGCAAATTGAGAGAGAAGTCATCAAGTACTTCTCCAACATCTATAAAGACAA
CAACTCGGCTTCAAGGATGGTTTCTAACCTTGATTGGAACCCAATTTCCAGGGAAGAATCGGATTCTTTAATCCGCCCTTTTTCAGAAGAAGAAGTTCTTCAGAATCTTA
AATCTATGGGTCGAAACAAATCTCCCAACCCTGATGGGAATCAGAAGCCTAGGAGGCTTTATCGGCTTCATTCCCAATGCCTATGCTTCATCGTGGGAATGACAATCTTC
AGTGGATCCATTGTGAGGATGGAGCCTTCACAATTGCCTCTGCCCCACTTTTCTTCTGGTCTGAAGATTCCCCCCCGGCTATCCACATGGAACCTCAGGCCCTTTTCAAA
CCTTTGGGGTGCTGCAATCCCAAAGAAAATCAAATTCTTCATTTGGACAGTCCTTCATCGGAGGATAAATACGGCAAACATACTACAAGCGGTCTTCAAGAACTTTGCCT
TTAGTCCGAGCTGCTGCATTTTGTGTTACAGCCATTCGGAGACCTTAGACCACATATTAATTCATTGTCCCCTTGCTTCAAACTTTTGGCAATCTCTTCATGGTGCTTCG
GGGGTCCATTTCCCGGCTCAGGCTATGGCTCATAATTTCTGCGAGGAGACCTTTTACCGGAAAGGCAATTCCCAGCGAAGCATTATTATTCAGGCAATATCTGCAGCTAT
TTTGTGGTCTTTATGGACGGAGCGAAACTCTCGGATTTGTAAAAATCTTTCCCGCTCAACCTCTCAAATCTGGGAAGATATCATTGCTAATGCATCTTACTGGGTTTCCT
CTTCTAAGCTTTTTGCTAATTATGATGCATTTTCAATAGCTTTGAACTGGAAAGCTTTTTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGGATATGCCTGAGAACCACCAGAATTACAATGTCCGACGAGCTCAACTGACACCACCATCGGCACCGCCATGTCCTTGGCGCTTTGCAGGATGGACTTACCGCAT
CGCCTTCCAGTATCTAGTTTATATCTTCCTCCTCAAATCCTCCGCAGTAGTCCACGCCGTTCAGATACCTACGCCAAAACGGAAGGAGAGCAAGAGAGCAAGGGGAGAAG
TCGAGAATGAAGTTCGGGATCCCTTCTTCAGTGATGAAGATGGGTTTAAATACCTGCTCATGCTCCTAGGGTTTTTAAGAATTCGGAGGCGATTCAGGCTGAACCGAGTG
AAACCGAGGCAGCCGAGGGCATCAGAGACCGAACGGAGGCGGAAGAGCTCGGCCGAGGTCCAAGGCCGAGGCCGAGCAGGGGGTCGGGCCAAAAGCCCGATCCCTTCGGC
TTTGGCCCGACCCTTTGGCCTGTTCTTCCTTCGGGTTCCGTTTCCTAGCTGTCTCCTTGGGCTGGTATCGTGCTGCCCTCATCAATTCCTTACATATCGGAATCTCCATC
ATGCAACCTCTCAAGAATTAAGATATCTCAGACAACGCTGTAAAAATCTATGGCTTAAGAATGGTGATGAAAATACTTCTTTTTTTCATAAAGTGTGCTCGGCTCGCAGT
AGATGGAGTTTTATATCTGAATTGGTCTCAGCGAATGGTCTCAGTTTAGTCTCGGATATGCAAATTGAGAGAGAAGTCATCAAGTACTTCTCCAACATCTATAAAGACAA
CAACTCGGCTTCAAGGATGGTTTCTAACCTTGATTGGAACCCAATTTCCAGGGAAGAATCGGATTCTTTAATCCGCCCTTTTTCAGAAGAAGAAGTTCTTCAGAATCTTA
AATCTATGGGTCGAAACAAATCTCCCAACCCTGATGGGAATCAGAAGCCTAGGAGGCTTTATCGGCTTCATTCCCAATGCCTATGCTTCATCGTGGGAATGACAATCTTC
AGTGGATCCATTGTGAGGATGGAGCCTTCACAATTGCCTCTGCCCCACTTTTCTTCTGGTCTGAAGATTCCCCCCCGGCTATCCACATGGAACCTCAGGCCCTTTTCAAA
CCTTTGGGGTGCTGCAATCCCAAAGAAAATCAAATTCTTCATTTGGACAGTCCTTCATCGGAGGATAAATACGGCAAACATACTACAAGCGGTCTTCAAGAACTTTGCCT
TTAGTCCGAGCTGCTGCATTTTGTGTTACAGCCATTCGGAGACCTTAGACCACATATTAATTCATTGTCCCCTTGCTTCAAACTTTTGGCAATCTCTTCATGGTGCTTCG
GGGGTCCATTTCCCGGCTCAGGCTATGGCTCATAATTTCTGCGAGGAGACCTTTTACCGGAAAGGCAATTCCCAGCGAAGCATTATTATTCAGGCAATATCTGCAGCTAT
TTTGTGGTCTTTATGGACGGAGCGAAACTCTCGGATTTGTAAAAATCTTTCCCGCTCAACCTCTCAAATCTGGGAAGATATCATTGCTAATGCATCTTACTGGGTTTCCT
CTTCTAAGCTTTTTGCTAATTATGATGCATTTTCAATAGCTTTGAACTGGAAAGCTTTTTTGTAG
Protein sequenceShow/hide protein sequence
MMDMPENHQNYNVRRAQLTPPSAPPCPWRFAGWTYRIAFQYLVYIFLLKSSAVVHAVQIPTPKRKESKRARGEVENEVRDPFFSDEDGFKYLLMLLGFLRIRRRFRLNRV
KPRQPRASETERRRKSSAEVQGRGRAGGRAKSPIPSALARPFGLFFLRVPFPSCLLGLVSCCPHQFLTYRNLHHATSQELRYLRQRCKNLWLKNGDENTSFFHKVCSARS
RWSFISELVSANGLSLVSDMQIEREVIKYFSNIYKDNNSASRMVSNLDWNPISREESDSLIRPFSEEEVLQNLKSMGRNKSPNPDGNQKPRRLYRLHSQCLCFIVGMTIF
SGSIVRMEPSQLPLPHFSSGLKIPPRLSTWNLRPFSNLWGAAIPKKIKFFIWTVLHRRINTANILQAVFKNFAFSPSCCILCYSHSETLDHILIHCPLASNFWQSLHGAS
GVHFPAQAMAHNFCEETFYRKGNSQRSIIIQAISAAILWSLWTERNSRICKNLSRSTSQIWEDIIANASYWVSSSKLFANYDAFSIALNWKAFL