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Spg008585 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008585
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description1-deoxy-D-xylulose 5-phosphate synthase family protein
Genome locationscaffold10:29809674..29813957
RNA-Seq ExpressionSpg008585
SyntenySpg008585
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4375842.1 hypothetical protein G4B88_026421 [Cannabis sativa]2.6e-0538.89Show/hide
Query:  MATTHDTTIPQKCVMLLYNIYKGLDLNLGRIIWNKILDCGHKNVGRLFFPSLITKLYRLAGVEPKAHEEKKV
        + T+HD+T+ ++ + +LY I KG  +N+G++I  +I +C H+  G+LFF  LIT+  R A V P  ++E  V
Subjt:  MATTHDTTIPQKCVMLLYNIYKGLDLNLGRIIWNKILDCGHKNVGRLFFPSLITKLYRLAGVEPKAHEEKKV

MBA0756372.1 hypothetical protein [Gossypium gossypioides]8.9e-0632.97Show/hide
Query:  MATTHDTTIPQKCVMLLYNIYKGLDLNLGRIIWNKILDCGHKNVGRLFFPSLITKLYRLAGVEPKAHEEKKVANTFIGSNLIRKLIANCRQ
        M  ++ +TI  K ++LLY I     +N+G+II  KI DC  K  G ++FPSL+T L   A V+ +A+ +      +I ++ +  L+ N  +
Subjt:  MATTHDTTIPQKCVMLLYNIYKGLDLNLGRIIWNKILDCGHKNVGRLFFPSLITKLYRLAGVEPKAHEEKKVANTFIGSNLIRKLIANCRQ

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]4.4e-0541.43Show/hide
Query:  MATTHDTTIPQKCVMLLYNIYKGLDLNLGRIIWNKILDCGHKNVGRLFFPSLITKLYRLAGVEPKAHEEK
        + TTH  T+ +  ++LLY++  G  +N+GR+I ++I  C  +  G LFFPSLIT+L R A      +EEK
Subjt:  MATTHDTTIPQKCVMLLYNIYKGLDLNLGRIIWNKILDCGHKNVGRLFFPSLITKLYRLAGVEPKAHEEK

PON65869.1 hypothetical protein PanWU01x14_113580, partial [Parasponia andersonii]1.0e-0642.86Show/hide
Query:  MATTHDTTIPQKCVMLLYNIYKGLDLNLGRIIWNKILDCGHKNVGRLFFPSLITKLYRLAGVEPKAHEEK
        + TTH   + ++CV+LLY++  G  +N+GRII  +I  C  +  G LFFPSLIT++ R A      +EEK
Subjt:  MATTHDTTIPQKCVMLLYNIYKGLDLNLGRIIWNKILDCGHKNVGRLFFPSLITKLYRLAGVEPKAHEEK

XP_015385578.1 drebrin-like [Citrus sinensis]4.4e-0543.66Show/hide
Query:  MATTHDTTIPQKCVMLLYNIYKGLDLNLGRIIWNKILDCGHKN--VGRLFFPSLITKLYRLAGVEPKAHEE
        M TTH TT+ Q+ +++LY I +GL +++G II  +I DC  KN     L FPSLIT +  ++GV   A +E
Subjt:  MATTHDTTIPQKCVMLLYNIYKGLDLNLGRIIWNKILDCGHKN--VGRLFFPSLITKLYRLAGVEPKAHEE

TrEMBL top hitse value%identityAlignment
A0A2P5CEY2 Uncharacterized protein2.1e-0541.43Show/hide
Query:  MATTHDTTIPQKCVMLLYNIYKGLDLNLGRIIWNKILDCGHKNVGRLFFPSLITKLYRLAGVEPKAHEEK
        + TTH  T+ +  ++LLY++  G  +N+GR+I ++I  C  +  G LFFPSLIT+L R A      +EEK
Subjt:  MATTHDTTIPQKCVMLLYNIYKGLDLNLGRIIWNKILDCGHKNVGRLFFPSLITKLYRLAGVEPKAHEEK

A0A2P5CXU3 Uncharacterized protein (Fragment)5.1e-0742.86Show/hide
Query:  MATTHDTTIPQKCVMLLYNIYKGLDLNLGRIIWNKILDCGHKNVGRLFFPSLITKLYRLAGVEPKAHEEK
        + TTH   + ++CV+LLY++  G  +N+GRII  +I  C  +  G LFFPSLIT++ R A      +EEK
Subjt:  MATTHDTTIPQKCVMLLYNIYKGLDLNLGRIIWNKILDCGHKNVGRLFFPSLITKLYRLAGVEPKAHEEK

A0A7J6FZ22 Uncharacterized protein1.3e-0538.89Show/hide
Query:  MATTHDTTIPQKCVMLLYNIYKGLDLNLGRIIWNKILDCGHKNVGRLFFPSLITKLYRLAGVEPKAHEEKKV
        + T+HD+T+ ++ + +LY I KG  +N+G++I  +I +C H+  G+LFF  LIT+  R A V P  ++E  V
Subjt:  MATTHDTTIPQKCVMLLYNIYKGLDLNLGRIIWNKILDCGHKNVGRLFFPSLITKLYRLAGVEPKAHEEKKV

A0A7J9D6N4 Uncharacterized protein4.3e-0632.97Show/hide
Query:  MATTHDTTIPQKCVMLLYNIYKGLDLNLGRIIWNKILDCGHKNVGRLFFPSLITKLYRLAGVEPKAHEEKKVANTFIGSNLIRKLIANCRQ
        M  ++ +TI  K ++LLY I     +N+G+II  KI DC  K  G ++FPSL+T L   A V+ +A+ +      +I ++ +  L+ N  +
Subjt:  MATTHDTTIPQKCVMLLYNIYKGLDLNLGRIIWNKILDCGHKNVGRLFFPSLITKLYRLAGVEPKAHEEKKVANTFIGSNLIRKLIANCRQ

A0A803Q715 Uncharacterized protein1.3e-0538.89Show/hide
Query:  MATTHDTTIPQKCVMLLYNIYKGLDLNLGRIIWNKILDCGHKNVGRLFFPSLITKLYRLAGVEPKAHEEKKV
        + T+HD+T+ ++ + +LY I KG  +N+G++I  +I +C H+  G+LFF  LIT+  R A V P  ++E  V
Subjt:  MATTHDTTIPQKCVMLLYNIYKGLDLNLGRIIWNKILDCGHKNVGRLFFPSLITKLYRLAGVEPKAHEEKKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACGACACATGACACCACCATCCCACAGAAGTGTGTCATGTTGTTGTACAACATATATAAGGGCCTGGATCTCAACCTTGGTCGGATAATTTGGAACAAGATCCT
TGACTGCGGACACAAAAACGTGGGGAGACTTTTCTTCCCTAGCTTGATCACGAAGCTCTATAGACTTGCAGGAGTTGAGCCCAAGGCTCATGAGGAGAAGAAGGTTGCCA
ATACTTTCATTGGTTCGAACTTGATTAGAAAGCTCATTGCGAACTGTAGGCAGAAGCGTCTCGACGCTGTCGACAGAATCTTTATAAATAGAAAGCGATTTACTACGACC
AAAGGGAGTCCATTTGATGCAATTTTAGCCCTAAATTCGACTAGAGACCTTATGTGGGAGCTGAAGCAAAGTGGAGGAGCAGGATTCAAGGCTAAGCTCGTGGAGATTGT
GACGGGGACGTGCATGAAATTCTCCACTCAAGCCAACTACATCGTTAAACAGGTGGGACTTCAATCTTCGGCTTTCGGTGTCATTCTTCAGGCCCGCTTCAACACAATTG
GGTCTCTTCACCTCCTCGCTGTCCAAGACATCGAGATGGCTCCAAAACTCCTTAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTACGACACATGACACCACCATCCCACAGAAGTGTGTCATGTTGTTGTACAACATATATAAGGGCCTGGATCTCAACCTTGGTCGGATAATTTGGAACAAGATCCT
TGACTGCGGACACAAAAACGTGGGGAGACTTTTCTTCCCTAGCTTGATCACGAAGCTCTATAGACTTGCAGGAGTTGAGCCCAAGGCTCATGAGGAGAAGAAGGTTGCCA
ATACTTTCATTGGTTCGAACTTGATTAGAAAGCTCATTGCGAACTGTAGGCAGAAGCGTCTCGACGCTGTCGACAGAATCTTTATAAATAGAAAGCGATTTACTACGACC
AAAGGGAGTCCATTTGATGCAATTTTAGCCCTAAATTCGACTAGAGACCTTATGTGGGAGCTGAAGCAAAGTGGAGGAGCAGGATTCAAGGCTAAGCTCGTGGAGATTGT
GACGGGGACGTGCATGAAATTCTCCACTCAAGCCAACTACATCGTTAAACAGGTGGGACTTCAATCTTCGGCTTTCGGTGTCATTCTTCAGGCCCGCTTCAACACAATTG
GGTCTCTTCACCTCCTCGCTGTCCAAGACATCGAGATGGCTCCAAAACTCCTTAATTAG
Protein sequenceShow/hide protein sequence
MATTHDTTIPQKCVMLLYNIYKGLDLNLGRIIWNKILDCGHKNVGRLFFPSLITKLYRLAGVEPKAHEEKKVANTFIGSNLIRKLIANCRQKRLDAVDRIFINRKRFTTT
KGSPFDAILALNSTRDLMWELKQSGGAGFKAKLVEIVTGTCMKFSTQANYIVKQVGLQSSAFGVILQARFNTIGSLHLLAVQDIEMAPKLLN