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Spg008593 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008593
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptioncentromere protein V-like
Genome locationscaffold10:34088145..34091154
RNA-Seq ExpressionSpg008593
SyntenySpg008593
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
GO:0051907 - S-(hydroxymethyl)glutathione synthase activity (molecular function)
InterPro domainsIPR006913 - CENP-V/GFA domain
IPR011057 - Mss4-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062377.1 centromere protein V isoform X5 [Cucumis melo var. makuwa]1.5e-4180.41Show/hide
Query:  SDEMVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS
        +D+MVVH+GGCHCKRIRWEV+A +SV AWDCNCS+C MR NTHFTVP + F LLG+S  F+STYTFGTH AKHTFCKVCGITSFYHSRSTPDGVSVS
Subjt:  SDEMVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS

KAE8648420.1 hypothetical protein Csa_007866 [Cucumis sativus]8.1e-4382.47Show/hide
Query:  SDEMVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS
        +DEMVVH+GGCHCKRIRWEV+A +SV AWDCNCS+C MR NTHFTVP + FKLLG+S+ F+STYTFGTH AKHTFCKVCGITSFYHSRSTPDGVSVS
Subjt:  SDEMVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS

KAG6602043.1 Centromere protein V, partial [Cucurbita argyrosperma subsp. sororia]2.3e-4284.21Show/hide
Query:  EMVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS
        +MV+H GGCHCKRIRWEV+A ASVTAW+CNCSDC MR NTHFTVP   FKLLG+S+KFVSTYTFGTHIA HTFCKVCGITSFYHSRSTPDGVSV+
Subjt:  EMVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS

KAG7032737.1 Centromere protein V, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-4284.21Show/hide
Query:  EMVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS
        +MV+H GGCHCKRIRWEV+A ASVTAW+CNCSDC MR NTHFTVP   FKLLG+S+KFVSTYTFGTHIA HTFCKVCGITSFYHSRSTPDGVSV+
Subjt:  EMVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS

XP_022999779.1 centromere protein V-like [Cucurbita maxima]1.3e-4077.89Show/hide
Query:  EMVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS
        E+VVHNGGCHCK++RW V+APASV AWDCNCSDC+MRANTHF VP   FKLLG+S+ F+STYTFGTH AKHTFCKVCGITSFYH RS PDGV+++
Subjt:  EMVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS

TrEMBL top hitse value%identityAlignment
A0A0A0KN47 CENP-V/GFA domain-containing protein3.9e-4382.47Show/hide
Query:  SDEMVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS
        +DEMVVH+GGCHCKRIRWEV+A +SV AWDCNCS+C MR NTHFTVP + FKLLG+S+ F+STYTFGTH AKHTFCKVCGITSFYHSRSTPDGVSVS
Subjt:  SDEMVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS

A0A5A7V607 Centromere protein V isoform X57.4e-4280.41Show/hide
Query:  SDEMVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS
        +D+MVVH+GGCHCKRIRWEV+A +SV AWDCNCS+C MR NTHFTVP + F LLG+S  F+STYTFGTH AKHTFCKVCGITSFYHSRSTPDGVSVS
Subjt:  SDEMVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS

A0A6J1G4E1 centromere protein V-like3.1e-4076.84Show/hide
Query:  EMVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS
        E+VVHNGGCHCK +RW V+AP SV AWDCNCSDC+MRANTHF VP   FKLLG+S+ F+STYTFGTH AKHTFCKVCGITSFYH RS PDGV+++
Subjt:  EMVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS

A0A6J1KE30 centromere protein V-like6.2e-4177.89Show/hide
Query:  EMVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS
        E+VVHNGGCHCK++RW V+APASV AWDCNCSDC+MRANTHF VP   FKLLG+S+ F+STYTFGTH AKHTFCKVCGITSFYH RS PDGV+++
Subjt:  EMVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS

I3SET8 CENP-V/GFA domain-containing protein2.6e-3973.47Show/hide
Query:  ASDEMVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS
        A  E VVHNGGCHCK +RW+V AP+SV AWDCNCS+CYMRAN HF VP  +F+LLG+S KF++TYTFGTH AKHTFCK+CGITSFY+ RS PDGV+VS
Subjt:  ASDEMVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS

SwissProt top hitse value%identityAlignment
A0A0U1RR11 Centromere protein V-like protein 13.3e-1537.8Show/hide
Query:  MVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS-HVFPS
        +V H GGCHC  +R+ V APA +   DC+C  C  + + HF VP   F LL  +E  V TY   TH A H+FC  CG+ SF+ + S P    V+ H    
Subjt:  MVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS-HVFPS

Query:  STNLPLVAREGQTNRPRGQGRGEDYDA
         T   +V  E     P G+   E++ A
Subjt:  STNLPLVAREGQTNRPRGQGRGEDYDA

A0A0U1RRI6 Centromere protein V-like protein 33.3e-1537.8Show/hide
Query:  MVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS-HVFPS
        +V H GGCHC  +R+ V APA +   DC+C  C  + + HF VP   F LL  +E  V TY   TH A H+FC  CG+ SF+ + S P    V+ H    
Subjt:  MVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS-HVFPS

Query:  STNLPLVAREGQTNRPRGQGRGEDYDA
         T   +V  E     P G+   E++ A
Subjt:  STNLPLVAREGQTNRPRGQGRGEDYDA

P0DPI3 Centromere protein V-like protein 23.3e-1537.8Show/hide
Query:  MVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS-HVFPS
        +V H GGCHC  +R+ V APA +   DC+C  C  + + HF VP   F LL  +E  V TY   TH A H+FC  CG+ SF+ + S P    V+ H    
Subjt:  MVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS-HVFPS

Query:  STNLPLVAREGQTNRPRGQGRGEDYDA
         T   +V  E     P G+   E++ A
Subjt:  STNLPLVAREGQTNRPRGQGRGEDYDA

Q7Z7K6 Centromere protein V1.9e-2348.18Show/hide
Query:  MVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS-HVFPS
        +V H GGCHC  +R+EV A A +  +DCNCS C  + N HF VP   FKLL  +E  ++TYTF TH A+HTFCK CG+ SFY  RS P G  ++ H    
Subjt:  MVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS-HVFPS

Query:  STNLPLVARE
         T   +V  E
Subjt:  STNLPLVARE

Q9CXS4 Centromere protein V1.5e-2348.18Show/hide
Query:  MVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS-HVFPS
        +V H GGCHC  +R+EV A A +  +DCNCS C  + N HF VP   FKLL  +E  ++TYTF TH A+HTFCK CG+ SFY  RS P G  ++ H    
Subjt:  MVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS-HVFPS

Query:  STNLPLVARE
         T   +V  E
Subjt:  STNLPLVARE

Arabidopsis top hitse value%identityAlignment
AT5G16940.1 carbon-sulfur lyases6.0e-3665.26Show/hide
Query:  EMVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS
        E++ H GGCHC +I+W V+A  SV AW CNCSDC MR N HF VP  +F+LL +S+ F++TYTFGTH AKHTFCKVCGITSFY  RS PDGV+V+
Subjt:  EMVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS

AT5G16940.2 carbon-sulfur lyases6.0e-3665.26Show/hide
Query:  EMVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS
        E++ H GGCHC +I+W V+A  SV AW CNCSDC MR N HF VP  +F+LL +S+ F++TYTFGTH AKHTFCKVCGITSFY  RS PDGV+V+
Subjt:  EMVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTGATGAGATGGTAGTGCACAATGGTGGATGTCACTGCAAGAGAATAAGATGGGAAGTGCAAGCACCAGCGAGTGTCACAGCTTGGGATTGCAACTGTTCAGA
CTGCTACATGAGAGCCAATACGCATTTCACTGTGCCTGGTCGAGATTTTAAGCTTCTAGGAAACTCAGAAAAGTTCGTTTCCACCTACACTTTTGGGACTCACATTGCAA
AGCACACATTTTGCAAAGTTTGTGGGATCACTTCGTTTTACCATTCACGATCCACCCCAGATGGGGTTTCAGTCAGTCACGTCTTCCCCTCATCTACAAATTTACCATTA
GTGGCACGTGAAGGTCAGACGAATAGGCCGAGGGGCCAAGGCCGAGGAGAGGATTATGATGCCAAAATTGCCGCCCTTGAGGATAAGGTGAAGGGAATGAATCAGAGTTT
GTCCAGAATACTCCAAATCCTGGATAAACCCGGCCCTAGCACCAAACTCCATGAGGGGGGCTTGATTAGAGACCCAAAGAAAGGGAAGGAGCCAGTCGAGTACGTGGATG
AATCAGAGACAGAATCGAAAGGAAAGAAGACCAACAGCGCAACCAGCAAGGTCAGGGGGCTGAAGCATGCAGAGCGCACAGTACTGAGGAGCCCAGAGCCAAGTACCAGC
CGTAGAACAGACCTGAGAAATCTGATCGAGGAAAAACGCAAAATGGCCAAAACTGCCGAGTCCGAGGCCAGAGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGC
CAAGAAAGACAATCTCTCTTGGAAGACCGAGCTTCTAAACACACTAAAAGAGCTTGGAAATCCACAGGGAGACCTGCAGAACGCAGAGGAGTTGCTCAAGTCAAAGAGGT
CAGAACGTGAACACAAGAGACCTTCTTCATCTGACCACGACAGTAGGAAAGACAAAAAGCAGCGGACCGACGAGGGAGGCAGAGGCCGACCAGACTATGACAGAGGCCGA
CCAGATCATGGCCGAGGCCGACCAGACCAAGGAGACTACTTGAAGAAGTTTGAAAGGAACTGCATTCAGCTAAAAGACGAGATTGAAGCGCTGATTCGGAACGGATATCT
GAAGGAGTTCACCACAAAGGCCGAGGCAGACCAGAGATGGCCGAGGTCGACCAGAGATGGCCCAGGCAAAGATGATGGTGGACCTCCTCTAGAAATCCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTGATGAGATGGTAGTGCACAATGGTGGATGTCACTGCAAGAGAATAAGATGGGAAGTGCAAGCACCAGCGAGTGTCACAGCTTGGGATTGCAACTGTTCAGA
CTGCTACATGAGAGCCAATACGCATTTCACTGTGCCTGGTCGAGATTTTAAGCTTCTAGGAAACTCAGAAAAGTTCGTTTCCACCTACACTTTTGGGACTCACATTGCAA
AGCACACATTTTGCAAAGTTTGTGGGATCACTTCGTTTTACCATTCACGATCCACCCCAGATGGGGTTTCAGTCAGTCACGTCTTCCCCTCATCTACAAATTTACCATTA
GTGGCACGTGAAGGTCAGACGAATAGGCCGAGGGGCCAAGGCCGAGGAGAGGATTATGATGCCAAAATTGCCGCCCTTGAGGATAAGGTGAAGGGAATGAATCAGAGTTT
GTCCAGAATACTCCAAATCCTGGATAAACCCGGCCCTAGCACCAAACTCCATGAGGGGGGCTTGATTAGAGACCCAAAGAAAGGGAAGGAGCCAGTCGAGTACGTGGATG
AATCAGAGACAGAATCGAAAGGAAAGAAGACCAACAGCGCAACCAGCAAGGTCAGGGGGCTGAAGCATGCAGAGCGCACAGTACTGAGGAGCCCAGAGCCAAGTACCAGC
CGTAGAACAGACCTGAGAAATCTGATCGAGGAAAAACGCAAAATGGCCAAAACTGCCGAGTCCGAGGCCAGAGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGC
CAAGAAAGACAATCTCTCTTGGAAGACCGAGCTTCTAAACACACTAAAAGAGCTTGGAAATCCACAGGGAGACCTGCAGAACGCAGAGGAGTTGCTCAAGTCAAAGAGGT
CAGAACGTGAACACAAGAGACCTTCTTCATCTGACCACGACAGTAGGAAAGACAAAAAGCAGCGGACCGACGAGGGAGGCAGAGGCCGACCAGACTATGACAGAGGCCGA
CCAGATCATGGCCGAGGCCGACCAGACCAAGGAGACTACTTGAAGAAGTTTGAAAGGAACTGCATTCAGCTAAAAGACGAGATTGAAGCGCTGATTCGGAACGGATATCT
GAAGGAGTTCACCACAAAGGCCGAGGCAGACCAGAGATGGCCGAGGTCGACCAGAGATGGCCCAGGCAAAGATGATGGTGGACCTCCTCTAGAAATCCATTGA
Protein sequenceShow/hide protein sequence
MASDEMVVHNGGCHCKRIRWEVQAPASVTAWDCNCSDCYMRANTHFTVPGRDFKLLGNSEKFVSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSHVFPSSTNLPL
VAREGQTNRPRGQGRGEDYDAKIAALEDKVKGMNQSLSRILQILDKPGPSTKLHEGGLIRDPKKGKEPVEYVDESETESKGKKTNSATSKVRGLKHAERTVLRSPEPSTS
RRTDLRNLIEEKRKMAKTAESEARAAEAEARAAEAEAKKDNLSWKTELLNTLKELGNPQGDLQNAEELLKSKRSEREHKRPSSSDHDSRKDKKQRTDEGGRGRPDYDRGR
PDHGRGRPDQGDYLKKFERNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRSTRDGPGKDDGGPPLEIH