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Spg008595 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008595
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionFanconi-associated nuclease
Genome locationscaffold10:30184486..30186023
RNA-Seq ExpressionSpg008595
SyntenySpg008595
Gene Ontology termsGO:0009987 - cellular process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]4.6e-0725.74Show/hide
Query:  RKFASKPEPEVANIVKEFYVNFLDNGLWMTKVRGQLVHWSPTVINEYYDVPDF--PYAIFNSMEIAPSNDQLQAALITCAMDGECWKMSKNRNRSLLSAY
        R+F   P   +  +V+EFY N LD       V+   V ++   IN  + + +    Y  F S     +++QL+  L   A++G  W++S     + +   
Subjt:  RKFASKPEPEVANIVKEFYVNFLDNGLWMTKVRGQLVHWSPTVINEYYDVPDF--PYAIFNSMEIAPSNDQLQAALITCAMDGECWKMSKNRNRSLLSAY

Query:  VTLEANIWLW------------------------------------IIAREIASC-ALKKSGKLFFPNLITDLCLKANVQLTEEDEVVMDKGIIDTTTIT
        +   A IW                                      I  +EI +C A +K G L+FP+LIT L LKANV   +++ +V + G I T +I+
Subjt:  VTLEANIWLW------------------------------------IIAREIASC-ALKKSGKLFFPNLITDLCLKANVQLTEEDEVVMDKGIIDTTTIT

Query:  RL
        R+
Subjt:  RL

PIN01433.1 hypothetical protein CDL12_26059 [Handroanthus impetiginosus]9.9e-1026.73Show/hide
Query:  RKFASKPEPEVANIVKEFYVNFLDNGLWMTKVRGQLVHWSPTVINEYYDVPDFPYAIFNSMEIAPSNDQLQAALITCAMDGECWKMSKNRNRSLLSAYVT
        + F + PE  V  +V+EFY N  ++      VRG+ V +    INE Y++P      F +     +    +    T    G  WKM+K    S  S  + 
Subjt:  RKFASKPEPEVANIVKEFYVNFLDNGLWMTKVRGQLVHWSPTVINEYYDVPDFPYAIFNSMEIAPSNDQLQAALITCAMDGECWKMSKNRNRSLLSAYVT

Query:  LEANIWLW------------------------------------IIAREIASCALKKSGKLFFPNLITDLCLKANVQLTEEDEVVMDKGIIDTTTITRLM
          A IWLW                                    II+  I   A      L+FP+LIT LC +A V+  E++E++  +  ID TT+ R++
Subjt:  LEANIWLW------------------------------------IIAREIASCALKKSGKLFFPNLITDLCLKANVQLTEEDEVVMDKGIIDTTTITRLM

Query:  GA
         A
Subjt:  GA

PIN07564.1 hypothetical protein CDL12_19862 [Handroanthus impetiginosus]1.3e-0926.24Show/hide
Query:  RKFASKPEPEVANIVKEFYVNFLDNGLWMTKVRGQLVHWSPTVINEYYDVPDFPYAIFNSMEIAPSNDQLQAALITCAMDGECWKMSKNRNRSLLSAYVT
        + F ++PE  V  + +EFY N  ++  +   VRG+ V +    INE Y++P  P  +        +    +    T    G  WKM+K    S  S  + 
Subjt:  RKFASKPEPEVANIVKEFYVNFLDNGLWMTKVRGQLVHWSPTVINEYYDVPDFPYAIFNSMEIAPSNDQLQAALITCAMDGECWKMSKNRNRSLLSAYVT

Query:  LEANIWLW------------------------------------IIAREIASCALKKSGKLFFPNLITDLCLKANVQLTEEDEVVMDKGIIDTTTITRLM
          A IWLW                                    II+  I   A      L+FP+LIT LC +A V+  E++E++  +  ID TT+ R++
Subjt:  LEANIWLW------------------------------------IIAREIASCALKKSGKLFFPNLITDLCLKANVQLTEEDEVVMDKGIIDTTTITRLM

Query:  GA
         A
Subjt:  GA

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]6.0e-0720.98Show/hide
Query:  MGPRSIAKKIFRLKVLGDEGVSARVK---EKQPAQKEFSMVQPSSPPRRKASKDKGKEPMSS---SREEARKFASKPEPEVANIVKEFYVNFLDNGLWMT
        MG + +A+K  +      E  + R +   + +P   E   V  +       S+  G+ P  +   ++   ++F + PE  +  +V+EFY N  D      
Subjt:  MGPRSIAKKIFRLKVLGDEGVSARVK---EKQPAQKEFSMVQPSSPPRRKASKDKGKEPMSS---SREEARKFASKPEPEVANIVKEFYVNFLDNGLWMT

Query:  KVRGQLVHWSPTVINEYYDVPDFPYAIFNSMEIAPSNDQLQAALITCAMDGECWKMSKNRNRSLLSAYVTLEANIWLW----------------------
         VRG  V WS   IN  + + D P    +      +   L   L T A  G  W +S     + + + +T  A +W                        
Subjt:  KVRGQLVHWSPTVINEYYDVPDFPYAIFNSMEIAPSNDQLQAALITCAMDGECWKMSKNRNRSLLSAYVTLEANIWLW----------------------

Query:  --------------IIAREIASCALKKSGKLFFPNLITDLCLKANVQLTEEDEVVMDKGIIDTTTITRL-------------------------------
                      +I  EI +CA +K+G LFFP+LIT LC  A       +E + + G ID   + R+                               
Subjt:  --------------IIAREIASCALKKSGKLFFPNLITDLCLKANVQLTEEDEVVMDKGIIDTTTITRL-------------------------------

Query:  -------------------------MGAQQRLYWEYALKRDEMVEKAFNSDPEEVLPPFPPFPEGVLNPWCPPSSVEDDYEDGADD
                                    QQ+ +W Y+ +RD  ++KA  ++    +P FP FP+ +L         E D +DG+++
Subjt:  -------------------------MGAQQRLYWEYALKRDEMVEKAFNSDPEEVLPPFPPFPEGVLNPWCPPSSVEDDYEDGADD

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]2.3e-0622.95Show/hide
Query:  IVKEFYVNFLDNGLWMTKVRGQLVHWSPTVINEYYDVPDFPYAIFNSMEIAPSNDQLQAALITCAMDGECWKMSKNRNRSLLSAYVTLEANIWLW-----
        +V+EFY N  D       VRG  V WS   IN  + + D P    +      +  +L   L T A  G  W +S     + + + +T  A +W       
Subjt:  IVKEFYVNFLDNGLWMTKVRGQLVHWSPTVINEYYDVPDFPYAIFNSMEIAPSNDQLQAALITCAMDGECWKMSKNRNRSLLSAYVTLEANIWLW-----

Query:  -------------------------------IIAREIASCALKKSGKLFFPNLITDLCLKANVQLTEEDEVVMDKGIIDTTTITRL--------------
                                       +I  EI +CA +K+G LFFP+LIT LC  A   + EE   + + G ID   + R+              
Subjt:  -------------------------------IIAREIASCALKKSGKLFFPNLITDLCLKANVQLTEEDEVVMDKGIIDTTTITRL--------------

Query:  -------------------------------MGAQQRLYWEYALKRDEMVEKAFNSDPEEVLPPFPPFPEGVLNPWCPPSSVEDDYEDGADD
                                          QQ+ +W Y+ +RD  ++KA  ++    +P FP FP+ +L         E D +DG+++
Subjt:  -------------------------------MGAQQRLYWEYALKRDEMVEKAFNSDPEEVLPPFPPFPEGVLNPWCPPSSVEDDYEDGADD

TrEMBL top hitse value%identityAlignment
A0A2G9G807 Uncharacterized protein4.8e-1026.73Show/hide
Query:  RKFASKPEPEVANIVKEFYVNFLDNGLWMTKVRGQLVHWSPTVINEYYDVPDFPYAIFNSMEIAPSNDQLQAALITCAMDGECWKMSKNRNRSLLSAYVT
        + F + PE  V  +V+EFY N  ++      VRG+ V +    INE Y++P      F +     +    +    T    G  WKM+K    S  S  + 
Subjt:  RKFASKPEPEVANIVKEFYVNFLDNGLWMTKVRGQLVHWSPTVINEYYDVPDFPYAIFNSMEIAPSNDQLQAALITCAMDGECWKMSKNRNRSLLSAYVT

Query:  LEANIWLW------------------------------------IIAREIASCALKKSGKLFFPNLITDLCLKANVQLTEEDEVVMDKGIIDTTTITRLM
          A IWLW                                    II+  I   A      L+FP+LIT LC +A V+  E++E++  +  ID TT+ R++
Subjt:  LEANIWLW------------------------------------IIAREIASCALKKSGKLFFPNLITDLCLKANVQLTEEDEVVMDKGIIDTTTITRLM

Query:  GA
         A
Subjt:  GA

A0A2G9GQI5 Uncharacterized protein6.3e-1026.24Show/hide
Query:  RKFASKPEPEVANIVKEFYVNFLDNGLWMTKVRGQLVHWSPTVINEYYDVPDFPYAIFNSMEIAPSNDQLQAALITCAMDGECWKMSKNRNRSLLSAYVT
        + F ++PE  V  + +EFY N  ++  +   VRG+ V +    INE Y++P  P  +        +    +    T    G  WKM+K    S  S  + 
Subjt:  RKFASKPEPEVANIVKEFYVNFLDNGLWMTKVRGQLVHWSPTVINEYYDVPDFPYAIFNSMEIAPSNDQLQAALITCAMDGECWKMSKNRNRSLLSAYVT

Query:  LEANIWLW------------------------------------IIAREIASCALKKSGKLFFPNLITDLCLKANVQLTEEDEVVMDKGIIDTTTITRLM
          A IWLW                                    II+  I   A      L+FP+LIT LC +A V+  E++E++  +  ID TT+ R++
Subjt:  LEANIWLW------------------------------------IIAREIASCALKKSGKLFFPNLITDLCLKANVQLTEEDEVVMDKGIIDTTTITRLM

Query:  GA
         A
Subjt:  GA

A0A2P5BCG4 Uncharacterized protein (Fragment)2.9e-0720.98Show/hide
Query:  MGPRSIAKKIFRLKVLGDEGVSARVK---EKQPAQKEFSMVQPSSPPRRKASKDKGKEPMSS---SREEARKFASKPEPEVANIVKEFYVNFLDNGLWMT
        MG + +A+K  +      E  + R +   + +P   E   V  +       S+  G+ P  +   ++   ++F + PE  +  +V+EFY N  D      
Subjt:  MGPRSIAKKIFRLKVLGDEGVSARVK---EKQPAQKEFSMVQPSSPPRRKASKDKGKEPMSS---SREEARKFASKPEPEVANIVKEFYVNFLDNGLWMT

Query:  KVRGQLVHWSPTVINEYYDVPDFPYAIFNSMEIAPSNDQLQAALITCAMDGECWKMSKNRNRSLLSAYVTLEANIWLW----------------------
         VRG  V WS   IN  + + D P    +      +   L   L T A  G  W +S     + + + +T  A +W                        
Subjt:  KVRGQLVHWSPTVINEYYDVPDFPYAIFNSMEIAPSNDQLQAALITCAMDGECWKMSKNRNRSLLSAYVTLEANIWLW----------------------

Query:  --------------IIAREIASCALKKSGKLFFPNLITDLCLKANVQLTEEDEVVMDKGIIDTTTITRL-------------------------------
                      +I  EI +CA +K+G LFFP+LIT LC  A       +E + + G ID   + R+                               
Subjt:  --------------IIAREIASCALKKSGKLFFPNLITDLCLKANVQLTEEDEVVMDKGIIDTTTITRL-------------------------------

Query:  -------------------------MGAQQRLYWEYALKRDEMVEKAFNSDPEEVLPPFPPFPEGVLNPWCPPSSVEDDYEDGADD
                                    QQ+ +W Y+ +RD  ++KA  ++    +P FP FP+ +L         E D +DG+++
Subjt:  -------------------------MGAQQRLYWEYALKRDEMVEKAFNSDPEEVLPPFPPFPEGVLNPWCPPSSVEDDYEDGADD

A0A2P5DXM3 Uncharacterized protein1.1e-0622.95Show/hide
Query:  IVKEFYVNFLDNGLWMTKVRGQLVHWSPTVINEYYDVPDFPYAIFNSMEIAPSNDQLQAALITCAMDGECWKMSKNRNRSLLSAYVTLEANIWLW-----
        +V+EFY N  D       VRG  V WS   IN  + + D P    +      +  +L   L T A  G  W +S     + + + +T  A +W       
Subjt:  IVKEFYVNFLDNGLWMTKVRGQLVHWSPTVINEYYDVPDFPYAIFNSMEIAPSNDQLQAALITCAMDGECWKMSKNRNRSLLSAYVTLEANIWLW-----

Query:  -------------------------------IIAREIASCALKKSGKLFFPNLITDLCLKANVQLTEEDEVVMDKGIIDTTTITRL--------------
                                       +I  EI +CA +K+G LFFP+LIT LC  A   + EE   + + G ID   + R+              
Subjt:  -------------------------------IIAREIASCALKKSGKLFFPNLITDLCLKANVQLTEEDEVVMDKGIIDTTTITRL--------------

Query:  -------------------------------MGAQQRLYWEYALKRDEMVEKAFNSDPEEVLPPFPPFPEGVLNPWCPPSSVEDDYEDGADD
                                          QQ+ +W Y+ +RD  ++KA  ++    +P FP FP+ +L         E D +DG+++
Subjt:  -------------------------------MGAQQRLYWEYALKRDEMVEKAFNSDPEEVLPPFPPFPEGVLNPWCPPSSVEDDYEDGADD

W9QTD9 Uncharacterized protein2.2e-0725.74Show/hide
Query:  RKFASKPEPEVANIVKEFYVNFLDNGLWMTKVRGQLVHWSPTVINEYYDVPDF--PYAIFNSMEIAPSNDQLQAALITCAMDGECWKMSKNRNRSLLSAY
        R+F   P   +  +V+EFY N LD       V+   V ++   IN  + + +    Y  F S     +++QL+  L   A++G  W++S     + +   
Subjt:  RKFASKPEPEVANIVKEFYVNFLDNGLWMTKVRGQLVHWSPTVINEYYDVPDF--PYAIFNSMEIAPSNDQLQAALITCAMDGECWKMSKNRNRSLLSAY

Query:  VTLEANIWLW------------------------------------IIAREIASC-ALKKSGKLFFPNLITDLCLKANVQLTEEDEVVMDKGIIDTTTIT
        +   A IW                                      I  +EI +C A +K G L+FP+LIT L LKANV   +++ +V + G I T +I+
Subjt:  VTLEANIWLW------------------------------------IIAREIASC-ALKKSGKLFFPNLITDLCLKANVQLTEEDEVVMDKGIIDTTTIT

Query:  RL
        R+
Subjt:  RL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAACAAGAAGGCCAGTCTTTGCATGGCTCAGGGAAGCAATTTGGGCAGCCTTTTGGATGGTGGTAATGAAGAAAAATCTGAAATTAAATTGGGCAGACATGCATT
CGAAAAGTTGAAGACTCAAGGGCTCTCGTTATTCATGGGGCCTCGATCGATTGCAAAGAAAATATTTAGACTCAAGGTCCTTGGTGATGAAGGGGTGTCGGCAAGAGTTA
AAGAAAAGCAGCCAGCTCAAAAGGAATTTAGCATGGTGCAGCCTTCTTCTCCCCCTCGAAGAAAAGCATCAAAGGATAAAGGGAAAGAGCCCATGTCATCTTCAAGGGAA
GAAGCAAGGAAGTTTGCTAGTAAACCCGAGCCAGAAGTGGCTAACATTGTGAAAGAATTCTACGTCAACTTTCTAGATAACGGACTTTGGATGACAAAGGTTCGCGGCCA
GCTGGTGCATTGGAGCCCCACAGTGATTAACGAATACTATGATGTCCCGGATTTCCCCTATGCCATCTTCAACTCGATGGAGATTGCCCCCTCAAACGATCAACTCCAAG
CCGCTTTGATAACTTGTGCAATGGATGGAGAATGCTGGAAAATGTCTAAGAATAGAAATAGATCCTTGCTTTCGGCCTATGTCACATTGGAGGCTAATATTTGGTTATGG
ATTATTGCTAGGGAGATTGCTTCTTGTGCCCTAAAGAAATCGGGGAAGTTATTCTTTCCGAATCTCATTACGGATCTTTGCCTCAAAGCTAATGTGCAATTAACGGAGGA
AGATGAAGTGGTGATGGATAAGGGCATTATAGATACGACAACTATAACCCGCCTCATGGGGGCGCAACAGAGGCTATATTGGGAATATGCTCTCAAGCGGGATGAAATGG
TGGAGAAAGCCTTTAATTCTGACCCTGAGGAAGTACTTCCACCTTTCCCTCCATTCCCCGAAGGAGTACTTAATCCTTGGTGCCCGCCCTCATCCGTTGAGGATGATTAT
GAAGATGGAGCTGACGATGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAACAAGAAGGCCAGTCTTTGCATGGCTCAGGGAAGCAATTTGGGCAGCCTTTTGGATGGTGGTAATGAAGAAAAATCTGAAATTAAATTGGGCAGACATGCATT
CGAAAAGTTGAAGACTCAAGGGCTCTCGTTATTCATGGGGCCTCGATCGATTGCAAAGAAAATATTTAGACTCAAGGTCCTTGGTGATGAAGGGGTGTCGGCAAGAGTTA
AAGAAAAGCAGCCAGCTCAAAAGGAATTTAGCATGGTGCAGCCTTCTTCTCCCCCTCGAAGAAAAGCATCAAAGGATAAAGGGAAAGAGCCCATGTCATCTTCAAGGGAA
GAAGCAAGGAAGTTTGCTAGTAAACCCGAGCCAGAAGTGGCTAACATTGTGAAAGAATTCTACGTCAACTTTCTAGATAACGGACTTTGGATGACAAAGGTTCGCGGCCA
GCTGGTGCATTGGAGCCCCACAGTGATTAACGAATACTATGATGTCCCGGATTTCCCCTATGCCATCTTCAACTCGATGGAGATTGCCCCCTCAAACGATCAACTCCAAG
CCGCTTTGATAACTTGTGCAATGGATGGAGAATGCTGGAAAATGTCTAAGAATAGAAATAGATCCTTGCTTTCGGCCTATGTCACATTGGAGGCTAATATTTGGTTATGG
ATTATTGCTAGGGAGATTGCTTCTTGTGCCCTAAAGAAATCGGGGAAGTTATTCTTTCCGAATCTCATTACGGATCTTTGCCTCAAAGCTAATGTGCAATTAACGGAGGA
AGATGAAGTGGTGATGGATAAGGGCATTATAGATACGACAACTATAACCCGCCTCATGGGGGCGCAACAGAGGCTATATTGGGAATATGCTCTCAAGCGGGATGAAATGG
TGGAGAAAGCCTTTAATTCTGACCCTGAGGAAGTACTTCCACCTTTCCCTCCATTCCCCGAAGGAGTACTTAATCCTTGGTGCCCGCCCTCATCCGTTGAGGATGATTAT
GAAGATGGAGCTGACGATGAAGATTGA
Protein sequenceShow/hide protein sequence
MGNKKASLCMAQGSNLGSLLDGGNEEKSEIKLGRHAFEKLKTQGLSLFMGPRSIAKKIFRLKVLGDEGVSARVKEKQPAQKEFSMVQPSSPPRRKASKDKGKEPMSSSRE
EARKFASKPEPEVANIVKEFYVNFLDNGLWMTKVRGQLVHWSPTVINEYYDVPDFPYAIFNSMEIAPSNDQLQAALITCAMDGECWKMSKNRNRSLLSAYVTLEANIWLW
IIAREIASCALKKSGKLFFPNLITDLCLKANVQLTEEDEVVMDKGIIDTTTITRLMGAQQRLYWEYALKRDEMVEKAFNSDPEEVLPPFPPFPEGVLNPWCPPSSVEDDY
EDGADDED