; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg008628 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008628
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionendoplasmic reticulum-Golgi intermediate compartment protein 3
Genome locationscaffold10:33615912..33617810
RNA-Seq ExpressionSpg008628
SyntenySpg008628
Gene Ontology termsGO:0005783 - endoplasmic reticulum (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0030134 - COPII-coated ER to Golgi transport vesicle (cellular component)
InterPro domainsIPR012936 - Endoplasmic reticulum vesicle transporter, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032717.1 Endoplasmic reticulum-Golgi intermediate compartment protein 3 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-4789.62Show/hide
Query:  FHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTKPK
        F   ++IVPTEYRYISKDVLPTNQFSVTEYFSPM++S+R+WPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTKPK
Subjt:  FHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTKPK

Query:  SRSALH
         RS LH
Subjt:  SRSALH

XP_022141614.1 endoplasmic reticulum-Golgi intermediate compartment protein 3 [Momordica charantia]2.0e-4992.45Show/hide
Query:  FHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTKPK
        F   ++IVPTEYRYISKDVLPTNQFSVTEYFSPM+DSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFA+TGMLDRWM+RFLEALTKPK
Subjt:  FHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTKPK

Query:  SRSALH
        SRSALH
Subjt:  SRSALH

XP_022922666.1 endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X1 [Cucurbita moschata]1.1e-4789.62Show/hide
Query:  FHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTKPK
        F   ++IVPTEYRYISKDVLPTNQFSVTEYFSPM++S+R+WPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTKPK
Subjt:  FHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTKPK

Query:  SRSALH
         RS LH
Subjt:  SRSALH

XP_022922673.1 endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X2 [Cucurbita moschata]1.1e-4789.62Show/hide
Query:  FHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTKPK
        F   ++IVPTEYRYISKDVLPTNQFSVTEYFSPM++S+R+WPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTKPK
Subjt:  FHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTKPK

Query:  SRSALH
         RS LH
Subjt:  SRSALH

XP_022990521.1 endoplasmic reticulum-Golgi intermediate compartment protein 3-like [Cucurbita maxima]1.1e-4789.62Show/hide
Query:  FHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTKPK
        F   ++IVPTEYRYISKDVLPTNQFSVTEYFSPM++S+R+WPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTKPK
Subjt:  FHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTKPK

Query:  SRSALH
         RS LH
Subjt:  SRSALH

TrEMBL top hitse value%identityAlignment
A0A6J1CJ60 endoplasmic reticulum-Golgi intermediate compartment protein 39.9e-5092.45Show/hide
Query:  FHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTKPK
        F   ++IVPTEYRYISKDVLPTNQFSVTEYFSPM+DSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFA+TGMLDRWM+RFLEALTKPK
Subjt:  FHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTKPK

Query:  SRSALH
        SRSALH
Subjt:  SRSALH

A0A6J1E440 endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X25.4e-4889.62Show/hide
Query:  FHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTKPK
        F   ++IVPTEYRYISKDVLPTNQFSVTEYFSPM++S+R+WPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTKPK
Subjt:  FHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTKPK

Query:  SRSALH
         RS LH
Subjt:  SRSALH

A0A6J1E4Q9 endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X15.4e-4889.62Show/hide
Query:  FHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTKPK
        F   ++IVPTEYRYISKDVLPTNQFSVTEYFSPM++S+R+WPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTKPK
Subjt:  FHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTKPK

Query:  SRSALH
         RS LH
Subjt:  SRSALH

A0A6J1FM12 endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X17.1e-4888.68Show/hide
Query:  FHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTKPK
        F   ++IVPTEY+YISKDVLPTNQFSVTEYFSPM+D DRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWM+RFLEA+TKPK
Subjt:  FHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTKPK

Query:  SRSALH
         RSA+H
Subjt:  SRSALH

A0A6J1JTI7 endoplasmic reticulum-Golgi intermediate compartment protein 3-like5.4e-4889.62Show/hide
Query:  FHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTKPK
        F   ++IVPTEYRYISKDVLPTNQFSVTEYFSPM++S+R+WPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTKPK
Subjt:  FHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTKPK

Query:  SRSALH
         RS LH
Subjt:  SRSALH

SwissProt top hitse value%identityAlignment
Q4R8X1 Endoplasmic reticulum-Golgi intermediate compartment protein 33.1e-1640.2Show/hide
Query:  MFFHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSD--SDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEAL
        M F   +++VPT Y  +  +VL TNQFSVT +    +    D+  P V+ LY+LSP+ V + E+ RSF HF+T +CA++GG F V G++D  ++    A+
Subjt:  MFFHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSD--SDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEAL

Query:  TK
         K
Subjt:  TK

Q5EAE0 Endoplasmic reticulum-Golgi intermediate compartment protein 33.1e-1640.2Show/hide
Query:  MFFHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSD--SDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEAL
        M F   +++VPT Y  +  +VL TNQFSVT +    +    D+  P V+ LY+LSP+ V + E+ RSF HF+T +CA++GG F V G++D  ++    A+
Subjt:  MFFHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSD--SDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEAL

Query:  TK
         K
Subjt:  TK

Q5R8G3 Endoplasmic reticulum-Golgi intermediate compartment protein 33.1e-1640.2Show/hide
Query:  MFFHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSD--SDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEAL
        M F   +++VPT Y  +  +VL TNQFSVT +    +    D+  P V+ LY+LSP+ V + E+ RSF HF+T +CA++GG F V G++D  ++    A+
Subjt:  MFFHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSD--SDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEAL

Query:  TK
         K
Subjt:  TK

Q9CQE7 Endoplasmic reticulum-Golgi intermediate compartment protein 33.1e-1640.2Show/hide
Query:  MFFHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSD--SDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEAL
        M F   +++VPT Y  +  +VL TNQFSVT +    +    D+  P V+ LY+LSP+ V + E+ RSF HF+T +CA++GG F V G++D  ++    A+
Subjt:  MFFHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSD--SDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEAL

Query:  TK
         K
Subjt:  TK

Q9Y282 Endoplasmic reticulum-Golgi intermediate compartment protein 33.1e-1640.2Show/hide
Query:  MFFHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSD--SDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEAL
        M F   +++VPT Y  +  +VL TNQFSVT +    +    D+  P V+ LY+LSP+ V + E+ RSF HF+T +CA++GG F V G++D  ++    A+
Subjt:  MFFHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSD--SDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEAL

Query:  TK
         K
Subjt:  TK

Arabidopsis top hitse value%identityAlignment
AT1G22200.1 Endoplasmic reticulum vesicle transporter protein4.9e-1741.05Show/hide
Query:  LQIVPTEYRYISKDVLPTNQFSVTEYFSPM-SDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTK
        +++VP+ Y  + ++ + +NQFSVTE+F  M +   +S P V+F YDLSPI V  +E+   FLHF+T +CA++GG F V+G++D +++    A+ K
Subjt:  LQIVPTEYRYISKDVLPTNQFSVTEYFSPM-SDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTK

AT1G36050.1 Endoplasmic reticulum vesicle transporter protein4.4e-1845.26Show/hide
Query:  LQIVPTEYRYISKDVLPTNQFSVTEYF-SPMSDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTK
        +++VPT Y  I    + +NQFSVTE+  S  +   +S P V+F YDLSPI VT  EE  SFLHF+T +CA++GG F V+G++D +++   +A+ K
Subjt:  LQIVPTEYRYISKDVLPTNQFSVTEYF-SPMSDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTK

AT1G36050.2 Endoplasmic reticulum vesicle transporter protein4.4e-1845.26Show/hide
Query:  LQIVPTEYRYISKDVLPTNQFSVTEYF-SPMSDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTK
        +++VPT Y  I    + +NQFSVTE+  S  +   +S P V+F YDLSPI VT  EE  SFLHF+T +CA++GG F V+G++D +++   +A+ K
Subjt:  LQIVPTEYRYISKDVLPTNQFSVTEYF-SPMSDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTK

AT1G50950.1 Thioredoxin protein with domain of unknown function (DUF1692)3.2e-0850Show/hide
Query:  WPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLD
        +P   F ++LSP+ V I E  +SF HFIT +CA++GG F V G+LD
Subjt:  WPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLD

AT3G22290.1 Endoplasmic reticulum vesicle transporter protein8.0e-4477.88Show/hide
Query:  FHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTKPK
        F   ++IVPTEYRY+SKDVL TNQ+SVTEYF+PM++ DR+WPAVYFLYDLSPITVTIKEERRSFLH ITRLCAVLGGTFA+TGMLDRWMFRF+E+  K  
Subjt:  FHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTKPK

Query:  SRSA
        S  A
Subjt:  SRSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTTCCACGTTTCGTTGCAGATTGTTCCAACTGAGTATAGATACATCTCAAAAGATGTGTTACCTACCAATCAGTTTTCAGTCACTGAATATTTCTCGCCTATGTC
CGACTCTGATAGATCATGGCCAGCTGTTTACTTCTTGTATGATCTATCACCAATCACAGTGACCATCAAAGAAGAAAGGCGAAGTTTTCTCCACTTCATAACTCGGCTTT
GTGCTGTGTTAGGCGGGACCTTCGCTGTGACAGGTATGCTAGATCGTTGGATGTTTCGGTTTCTTGAGGCTCTGACAAAACCAAAAAGTAGAAGTGCATTGCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTTCCACGTTTCGTTGCAGATTGTTCCAACTGAGTATAGATACATCTCAAAAGATGTGTTACCTACCAATCAGTTTTCAGTCACTGAATATTTCTCGCCTATGTC
CGACTCTGATAGATCATGGCCAGCTGTTTACTTCTTGTATGATCTATCACCAATCACAGTGACCATCAAAGAAGAAAGGCGAAGTTTTCTCCACTTCATAACTCGGCTTT
GTGCTGTGTTAGGCGGGACCTTCGCTGTGACAGGTATGCTAGATCGTTGGATGTTTCGGTTTCTTGAGGCTCTGACAAAACCAAAAAGTAGAAGTGCATTGCATTAA
Protein sequenceShow/hide protein sequence
MFFHVSLQIVPTEYRYISKDVLPTNQFSVTEYFSPMSDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTKPKSRSALH