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Spg008639 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008639
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCCHC-type domain-containing protein
Genome locationscaffold10:31680740..31685085
RNA-Seq ExpressionSpg008639
SyntenySpg008639
Gene Ontology termsGO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN68872.1 hypothetical protein VITISV_020242 [Vitis vinifera]7.7e-1131.84Show/hide
Query:  PETQFLEEIDRKLLALSKGESSKQINVLND--SDFEDVDSLIEQFSALQMEE-PQNINKIEYSKTSDLINSYQRPSMADLNYEQNNKFLRNRQYDGTSVY
        P+  +  +I   L+A    +S K+IN++    S  E+ D LI+ F     +  P+NIN +E  KT    N Y RP+  D+ +E+ N++ +   Y   ++Y
Subjt:  PETQFLEEIDRKLLALSKGESSKQINVLND--SDFEDVDSLIEQFSALQMEE-PQNINKIEYSKTSDLINSYQRPSMADLNYEQNNKFLRNRQYDGTSVY

Query:  VWNIDGMSERQILNMLSEILIASVAYQENGN-TNHQAASMIINGFL-------VNHLQFEDTDSEISSQSNSHHSEGIK
         WNIDGM+E  IL  L E+ + S  Y+ N    +H  A  I+ GF         N+L F+D +S + +   + +SE +K
Subjt:  VWNIDGMSERQILNMLSEILIASVAYQENGN-TNHQAASMIINGFL-------VNHLQFEDTDSEISSQSNSHHSEGIK

KAF5803680.1 putative transcription factor interactor and regulator CCHC(Zn) family [Helianthus annuus]4.8e-1337.23Show/hide
Query:  LSKGESSKQINVLNDSDFEDVDSLIEQFSALQMEEPQNINKIE-----------YSKTSDLINSYQRPSMADLNYEQNNKFLRNRQYDGTSVYVWNIDGM
        +S   S   INV++D   +++ S+ EQF+  Q+E+  +I KI+           Y+   +  N Y RP+  DL +E+ +  ++  +YDGTS+Y WNI+G 
Subjt:  LSKGESSKQINVLNDSDFEDVDSLIEQFSALQMEEPQNINKIE-----------YSKTSDLINSYQRPSMADLNYEQNNKFLRNRQYDGTSVYVWNIDGM

Query:  SERQILNMLSEILIASVAYQENGNTNHQAASMIINGF
        +E QILN+L E+++A+ AY+ NGN   Q  +MI++GF
Subjt:  SERQILNMLSEILIASVAYQENGNTNHQAASMIINGF

KAG5586552.1 hypothetical protein H5410_046986 [Solanum commersonii]2.9e-1028.88Show/hide
Query:  INVLNDSDFEDVDSLIEQFSALQMEEPQNINKIEYSKTSDLINSYQRPSMADLNYEQNNKFLRNRQYDGTSVYVWNIDGMSERQILNMLSEILIASVAYQ
        I+V  D     V  L E+ +    E+   + K+  S+  ++ N + +PS  DL YE+N  FL    ++G S+  WNIDG++E Q+ N L E+ +A  AY+
Subjt:  INVLNDSDFEDVDSLIEQFSALQMEEPQNINKIEYSKTSDLINSYQRPSMADLNYEQNNKFLRNRQYDGTSVYVWNIDGMSERQILNMLSEILIASVAYQ

Query:  ENGNTNHQAASMIINGFLVNHLQFEDTDSEISSQSNS-------HHSEGIKAYKKDC---EGHC-------INVLT-NEQEVLFNSIDHIEDKEMKKTIL
           + +   A+MII G L+  L    ++S  +S   S        +   +    KDC   E  C       I +L+ + +E LF+ I HI D E +    
Subjt:  ENGNTNHQAASMIINGFLVNHLQFEDTDSEISSQSNS-------HHSEGIKAYKKDC---EGHC-------INVLT-NEQEVLFNSIDHIEDKEMKKTIL

Query:  KTLKQSLESSKSPEPPRERREIRQLSLREILD
          LK  L ++   + P+ R  I   S+++I++
Subjt:  KTLKQSLESSKSPEPPRERREIRQLSLREILD

MCI06258.1 hypothetical protein [Trifolium medium]1.3e-1031.29Show/hide
Query:  LKTPETQFLEEIDRKL--LALSKGESSKQINVLNDSDFEDVDSLIEQFSALQMEEPQNINKIEYSKTSDLINSYQRPSMADLNYEQNNKFLRNRQYDGTS
        L +   +F++ ++ KL  + L+    + + + ++ SD EDVD L++ F+   ++    IN +  SK  D    Y+RPS  DL +E+  K +    Y G +
Subjt:  LKTPETQFLEEIDRKL--LALSKGESSKQINVLNDSDFEDVDSLIEQFSALQMEEPQNINKIEYSKTSDLINSYQRPSMADLNYEQNNKFLRNRQYDGTS

Query:  VYVWNIDGMSERQILNMLSEILIASVAYQENGNTNHQAASMIINGFL
        +Y WNIDG++++QIL+++  +L+ S   +++GNT+H     I  GF+
Subjt:  VYVWNIDGMSERQILNMLSEILIASVAYQENGNTNHQAASMIINGFL

XP_033139453.1 uncharacterized protein LOC117131412 isoform X1 [Brassica rapa]9.1e-1229.54Show/hide
Query:  PTPEPVKPIFSLLKKVNLKTPETQFLEEIDRKLLALSKGESSKQINVLNDSDFEDVDSLIEQFSALQMEEPQNINKIEYSKTSDLINSYQRPSMADLNYE
        P      PIF    +  +K PE + L+ I  +L  L KG   K IN +++ + E +     Q S+    + Q IN+I   K       Y R +  DL +E
Subjt:  PTPEPVKPIFSLLKKVNLKTPETQFLEEIDRKLLALSKGESSKQINVLNDSDFEDVDSLIEQFSALQMEEPQNINKIEYSKTSDLINSYQRPSMADLNYE

Query:  QNNKFLRNRQYDGTSVYVWNIDGMSERQILNMLSEILIASVAYQENGNTNHQAASMIINGFLVNHLQFEDTDSEISSQSNSHHSEGIKAYKKDCEGHCIN
        +++K+  +++Y G S+Y WNIDG SE ++LN+  E+++A++AY+  GN + Q+  ++++GF      + D   +  +Q +  +   IK  ++D EG   +
Subjt:  QNNKFLRNRQYDGTSVYVWNIDGMSERQILNMLSEILIASVAYQENGNTNHQAASMIINGFLVNHLQFEDTDSEISSQSNSHHSEGIKAYKKDCEGHCIN

Query:  V-LTNEQEVLFNSI------DHIEDKEMKKTILKTLK
        + + N  EVL +++      +  E+ E KK IL  L+
Subjt:  V-LTNEQEVLFNSI------DHIEDKEMKKTILKTLK

TrEMBL top hitse value%identityAlignment
A0A1J3J6U2 Movement protein (Fragment)4.9e-1129.38Show/hide
Query:  PTPEPVKPIFSLLKKVNLKTPETQFLEEIDRKLLALSKGESSKQINVLNDSDFEDVDSLIEQFSALQMEEPQNINKIEYSKTSDLINSYQRPSMADLNYE
        P      PIF    +  +K PE + L+ I  +L  L KG+S + I+ + +   +  +S           + Q IN+I++         Y R +  DL +E
Subjt:  PTPEPVKPIFSLLKKVNLKTPETQFLEEIDRKLLALSKGESSKQINVLNDSDFEDVDSLIEQFSALQMEEPQNINKIEYSKTSDLINSYQRPSMADLNYE

Query:  QNNKFLRNRQYDGTSVYVWNIDGMSERQILNMLSEILIASVAYQENGNTNHQAASMIINGFL-VNHLQFEDTDSEISSQSNSHHSEGIKAYKKD
        +++K+  N  Y G  +Y WNIDG SE +I+ +  E+ +A++A++  GNT+ QA  MI+ GF       ++++ S+    S  +H E I++Y  D
Subjt:  QNNKFLRNRQYDGTSVYVWNIDGMSERQILNMLSEILIASVAYQENGNTNHQAASMIINGFL-VNHLQFEDTDSEISSQSNSHHSEGIKAYKKD

A0A251TAC4 Uncharacterized protein8.0e-1432.37Show/hide
Query:  LTSIAEQVYRLE------DLIVPTPEPVK--------PIFSLLKKVNLKTP-----ETQFLEEIDRKLLALSKGESSKQINVLNDSDFEDVDSLIEQFSA
        L +I EQ+ R+E      +L  P+    K        PIF   K  N+  P     +   L++I  K+       S   INV++D   +++ S+ EQF+ 
Subjt:  LTSIAEQVYRLE------DLIVPTPEPVK--------PIFSLLKKVNLKTP-----ETQFLEEIDRKLLALSKGESSKQINVLNDSDFEDVDSLIEQFSA

Query:  LQMEEPQNINKIE-----------YSKTSDLINSYQRPSMADLNYEQNNKFLRNRQYDGTSVYVWNIDGMSERQILNMLSEILIASVAYQENGNTNHQAA
         Q+E+  +INKI+           Y+   +  N Y RP+  DL +E+ +  ++  +YDGTS+Y WNI+G +E QI+N+L ++++A+ AY+ NGN   Q  
Subjt:  LQMEEPQNINKIE-----------YSKTSDLINSYQRPSMADLNYEQNNKFLRNRQYDGTSVYVWNIDGMSERQILNMLSEILIASVAYQENGNTNHQAA

Query:  SMIINGF
        +MI++GF
Subjt:  SMIINGF

A0A251VET5 Putative reverse transcriptase domain, Zinc finger, CCHC-type, Aspartic peptidase domain protein2.8e-1432.84Show/hide
Query:  LTSIAEQVYRLE------DLIVPTPEPVKPIFS-----LLKKVNLKTP-----ETQFLEEIDRKLLALSKGESSKQINVLNDSDFEDVDSLIEQFSALQM
        L +I EQ+ R+E      +L  P+    K I       + K  N+  P     +   L++I  K+       S   INV++D   +++ S+ EQF+  Q+
Subjt:  LTSIAEQVYRLE------DLIVPTPEPVKPIFS-----LLKKVNLKTP-----ETQFLEEIDRKLLALSKGESSKQINVLNDSDFEDVDSLIEQFSALQM

Query:  EEPQNINKIE-----------YSKTSDLINSYQRPSMADLNYEQNNKFLRNRQYDGTSVYVWNIDGMSERQILNMLSEILIASVAYQENGNTNHQAASMI
        E+  +INKI+           Y+   +  N Y RP+  DL +E+ +  ++  +YDGTS+Y WNI+G +E QILN+L E+++A+ AY+ NGN   Q  +MI
Subjt:  EEPQNINKIE-----------YSKTSDLINSYQRPSMADLNYEQNNKFLRNRQYDGTSVYVWNIDGMSERQILNMLSEILIASVAYQENGNTNHQAASMI

Query:  INGF
        ++GF
Subjt:  INGF

A0A392P2N5 Uncharacterized protein6.3e-1131.29Show/hide
Query:  LKTPETQFLEEIDRKL--LALSKGESSKQINVLNDSDFEDVDSLIEQFSALQMEEPQNINKIEYSKTSDLINSYQRPSMADLNYEQNNKFLRNRQYDGTS
        L +   +F++ ++ KL  + L+    + + + ++ SD EDVD L++ F+   ++    IN +  SK  D    Y+RPS  DL +E+  K +    Y G +
Subjt:  LKTPETQFLEEIDRKL--LALSKGESSKQINVLNDSDFEDVDSLIEQFSALQMEEPQNINKIEYSKTSDLINSYQRPSMADLNYEQNNKFLRNRQYDGTS

Query:  VYVWNIDGMSERQILNMLSEILIASVAYQENGNTNHQAASMIINGFL
        +Y WNIDG++++QIL+++  +L+ S   +++GNT+H     I  GF+
Subjt:  VYVWNIDGMSERQILNMLSEILIASVAYQENGNTNHQAASMIINGFL

A5CBG1 CCHC-type domain-containing protein3.7e-1131.84Show/hide
Query:  PETQFLEEIDRKLLALSKGESSKQINVLND--SDFEDVDSLIEQFSALQMEE-PQNINKIEYSKTSDLINSYQRPSMADLNYEQNNKFLRNRQYDGTSVY
        P+  +  +I   L+A    +S K+IN++    S  E+ D LI+ F     +  P+NIN +E  KT    N Y RP+  D+ +E+ N++ +   Y   ++Y
Subjt:  PETQFLEEIDRKLLALSKGESSKQINVLND--SDFEDVDSLIEQFSALQMEE-PQNINKIEYSKTSDLINSYQRPSMADLNYEQNNKFLRNRQYDGTSVY

Query:  VWNIDGMSERQILNMLSEILIASVAYQENGN-TNHQAASMIINGFL-------VNHLQFEDTDSEISSQSNSHHSEGIK
         WNIDGM+E  IL  L E+ + S  Y+ N    +H  A  I+ GF         N+L F+D +S + +   + +SE +K
Subjt:  VWNIDGMSERQILNMLSEILIASVAYQENGN-TNHQAASMIINGFL-------VNHLQFEDTDSEISSQSNSHHSEGIK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAACCTCCATAGCTGAACAAGTTTACAGGCTGGAAGATCTTATAGTTCCTACTCCAGAACCTGTTAAACCAATTTTTAGCCTTCTCAAAAAGGTCAATCTCAAAAC
TCCCGAGACCCAATTCTTGGAAGAAATCGACAGAAAATTGTTAGCTCTCTCAAAAGGAGAAAGCTCAAAGCAAATCAATGTCCTAAACGACAGTGATTTTGAAGATGTCG
ATTCTCTTATAGAGCAATTCTCAGCCCTTCAAATGGAAGAACCTCAGAATATCAACAAGATAGAATATTCAAAAACTTCCGATCTAATAAATTCGTATCAAAGGCCTTCC
ATGGCAGATCTCAATTATGAGCAGAACAACAAGTTCCTCAGAAATAGACAATATGACGGAACATCAGTTTACGTCTGGAATATTGATGGTATGTCAGAAAGACAGATTCT
TAATATGCTCTCAGAAATACTTATAGCATCAGTAGCATATCAAGAAAATGGAAATACAAACCATCAAGCTGCTTCAATGATCATCAATGGCTTTTTAGTCAATCATCTTC
AATTCGAAGATACTGATTCAGAAATCTCCAGTCAAAGTAATAGCCATCATTCAGAAGGCATCAAAGCCTATAAAAAGGACTGTGAAGGACACTGCATAAATGTTCTTACC
AATGAACAAGAAGTTCTCTTCAACTCTATTGATCACATAGAGGACAAAGAGATGAAGAAAACCATTCTGAAGACATTAAAACAGTCTTTAGAATCTTCAAAATCCCCAGA
GCCGCCCAGAGAAAGAAGAGAAATCCGACAACTCAGTCTTAGGGAAATTCTTGATACCAAACTAGGAAGTAGAGGCAGAGCCTCCTCTTCAAGGGGCAGTCGCCCATCTT
CCTCTTCCTCAGCACCTCCTCCCATGAGTGCTGATCAATACGCAATGGATTTAGGGTTTACTCCGGTAACCCGATCCAGAGCTAGAACGACCGATTCTACCAACAGAGTC
ATCTACTCCACCTCCAAGGCCTTCGGCCAACCTCGTCCGTCCTTCCGGCGGAATTGTTCAATTGAGACCTCTTGTCTCTCCATCTTCAAGGACAGGATCATCGATCCCGT
CATCTTCAACTTACTCTCAGGCAGTTACTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTAACCTCCATAGCTGAACAAGTTTACAGGCTGGAAGATCTTATAGTTCCTACTCCAGAACCTGTTAAACCAATTTTTAGCCTTCTCAAAAAGGTCAATCTCAAAAC
TCCCGAGACCCAATTCTTGGAAGAAATCGACAGAAAATTGTTAGCTCTCTCAAAAGGAGAAAGCTCAAAGCAAATCAATGTCCTAAACGACAGTGATTTTGAAGATGTCG
ATTCTCTTATAGAGCAATTCTCAGCCCTTCAAATGGAAGAACCTCAGAATATCAACAAGATAGAATATTCAAAAACTTCCGATCTAATAAATTCGTATCAAAGGCCTTCC
ATGGCAGATCTCAATTATGAGCAGAACAACAAGTTCCTCAGAAATAGACAATATGACGGAACATCAGTTTACGTCTGGAATATTGATGGTATGTCAGAAAGACAGATTCT
TAATATGCTCTCAGAAATACTTATAGCATCAGTAGCATATCAAGAAAATGGAAATACAAACCATCAAGCTGCTTCAATGATCATCAATGGCTTTTTAGTCAATCATCTTC
AATTCGAAGATACTGATTCAGAAATCTCCAGTCAAAGTAATAGCCATCATTCAGAAGGCATCAAAGCCTATAAAAAGGACTGTGAAGGACACTGCATAAATGTTCTTACC
AATGAACAAGAAGTTCTCTTCAACTCTATTGATCACATAGAGGACAAAGAGATGAAGAAAACCATTCTGAAGACATTAAAACAGTCTTTAGAATCTTCAAAATCCCCAGA
GCCGCCCAGAGAAAGAAGAGAAATCCGACAACTCAGTCTTAGGGAAATTCTTGATACCAAACTAGGAAGTAGAGGCAGAGCCTCCTCTTCAAGGGGCAGTCGCCCATCTT
CCTCTTCCTCAGCACCTCCTCCCATGAGTGCTGATCAATACGCAATGGATTTAGGGTTTACTCCGGTAACCCGATCCAGAGCTAGAACGACCGATTCTACCAACAGAGTC
ATCTACTCCACCTCCAAGGCCTTCGGCCAACCTCGTCCGTCCTTCCGGCGGAATTGTTCAATTGAGACCTCTTGTCTCTCCATCTTCAAGGACAGGATCATCGATCCCGT
CATCTTCAACTTACTCTCAGGCAGTTACTCCTGA
Protein sequenceShow/hide protein sequence
MLTSIAEQVYRLEDLIVPTPEPVKPIFSLLKKVNLKTPETQFLEEIDRKLLALSKGESSKQINVLNDSDFEDVDSLIEQFSALQMEEPQNINKIEYSKTSDLINSYQRPS
MADLNYEQNNKFLRNRQYDGTSVYVWNIDGMSERQILNMLSEILIASVAYQENGNTNHQAASMIINGFLVNHLQFEDTDSEISSQSNSHHSEGIKAYKKDCEGHCINVLT
NEQEVLFNSIDHIEDKEMKKTILKTLKQSLESSKSPEPPRERREIRQLSLREILDTKLGSRGRASSSRGSRPSSSSSAPPPMSADQYAMDLGFTPVTRSRARTTDSTNRV
IYSTSKAFGQPRPSFRRNCSIETSCLSIFKDRIIDPVIFNLLSGSYS