; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg008669 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008669
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGeranylgeranyl pyrophosphate synthase, chloroplastic
Genome locationscaffold10:33786644..33787626
RNA-Seq ExpressionSpg008669
SyntenySpg008669
Gene Ontology termsGO:0008299 - isoprenoid biosynthetic process (biological process)
GO:0004659 - prenyltransferase activity (molecular function)
InterPro domainsIPR000092 - Polyprenyl synthetase
IPR008949 - Isoprenoid synthase domain superfamily
IPR033749 - Polyprenyl synthetase, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAY43756.1 hypothetical protein CUMW_076950 [Citrus unshiu]7.1e-3668.14Show/hide
Query:  LPKFEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDDDDVRRGKP
        LP F+F++Y++SK KRVN+AL++TV L+HP +IHEAMRYSLL  GKR  PVLC+ASCELVGGDE+ AMPVACA+EMI TM+L+ DDLPCMD+DD RRGKP
Subjt:  LPKFEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDDDDVRRGKP

Query:  ACHKASNEGDVIL
          HK   E   IL
Subjt:  ACHKASNEGDVIL

KAG6743200.1 hypothetical protein POTOM_054148 [Populus tomentosa]2.4e-3661.6Show/hide
Query:  SLKNNNDPSSLPK--FEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLP
        +LK  N P   P   F+FK+Y+ +K+++VNEAL + VPLQHP +IHEAMRYSLL  GKR CP+LC+ASCELVGGDE  AMP+ACA+EM+  M+L+ DDLP
Subjt:  SLKNNNDPSSLPK--FEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLP

Query:  CMDDDDVRRGKPACHKASNEGDVIL
        CMD+DD+RRGKP  HK   E   IL
Subjt:  CMDDDDVRRGKPACHKASNEGDVIL

PNS96572.1 hypothetical protein POPTR_017G124700 [Populus trichocarpa]5.4e-3661.6Show/hide
Query:  SLKNNNDPSSLPK--FEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLP
        +LK  N    +P   F+FK+Y+ +K+K+VNEAL + VPLQHP +IHEAMRYSLL  GKR CP+LC+ASCELVGGDE  AMP+ACA+EM+  M+L+ DDLP
Subjt:  SLKNNNDPSSLPK--FEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLP

Query:  CMDDDDVRRGKPACHKASNEGDVIL
        CMD+DD+RRGKP  HK   E   IL
Subjt:  CMDDDDVRRGKPACHKASNEGDVIL

XP_006383334.2 geranylgeranyl pyrophosphate synthase, chloroplastic [Populus trichocarpa]5.4e-3661.6Show/hide
Query:  SLKNNNDPSSLPK--FEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLP
        +LK  N    +P   F+FK+Y+ +K+K+VNEAL + VPLQHP +IHEAMRYSLL  GKR CP+LC+ASCELVGGDE  AMP+ACA+EM+  M+L+ DDLP
Subjt:  SLKNNNDPSSLPK--FEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLP

Query:  CMDDDDVRRGKPACHKASNEGDVIL
        CMD+DD+RRGKP  HK   E   IL
Subjt:  CMDDDDVRRGKPACHKASNEGDVIL

XP_006482126.1 geranylgeranyl pyrophosphate synthase 7, chloroplastic-like [Citrus sinensis]7.1e-3668.14Show/hide
Query:  LPKFEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDDDDVRRGKP
        LP F+F++Y++SK KRVN+AL++TV L+HP +IHEAMRYSLL  GKR  PVLC+ASCELVGGDE+ AMPVACA+EMI TM+L+ DDLPCMD+DD RRGKP
Subjt:  LPKFEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDDDDVRRGKP

Query:  ACHKASNEGDVIL
          HK   E   IL
Subjt:  ACHKASNEGDVIL

TrEMBL top hitse value%identityAlignment
A0A2H5NUF2 Uncharacterized protein3.4e-3668.14Show/hide
Query:  LPKFEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDDDDVRRGKP
        LP F+F++Y++SK KRVN+AL++TV L+HP +IHEAMRYSLL  GKR  PVLC+ASCELVGGDE+ AMPVACA+EMI TM+L+ DDLPCMD+DD RRGKP
Subjt:  LPKFEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDDDDVRRGKP

Query:  ACHKASNEGDVIL
          HK   E   IL
Subjt:  ACHKASNEGDVIL

A0A2K1X723 Uncharacterized protein2.6e-3661.6Show/hide
Query:  SLKNNNDPSSLPK--FEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLP
        +LK  N    +P   F+FK+Y+ +K+K+VNEAL + VPLQHP +IHEAMRYSLL  GKR CP+LC+ASCELVGGDE  AMP+ACA+EM+  M+L+ DDLP
Subjt:  SLKNNNDPSSLPK--FEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLP

Query:  CMDDDDVRRGKPACHKASNEGDVIL
        CMD+DD+RRGKP  HK   E   IL
Subjt:  CMDDDDVRRGKPACHKASNEGDVIL

A0A2K2AS04 Uncharacterized protein1.3e-3552.47Show/hide
Query:  NGFKSNQRRTTFA-------KAEAFNVFTDIEKYSLK-----NNNDPSSLPKFEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPV
        NG  +NQ RT          K +A  V +   K S +     N +   S P FEFK+Y+ +K  +VN+AL++ VPLQHP +I+EAMRYSLL  GKR  P+
Subjt:  NGFKSNQRRTTFA-------KAEAFNVFTDIEKYSLK-----NNNDPSSLPKFEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPV

Query:  LCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDDDDVRRGKPACHKASNEGDVIL
        LC+ASCELVGGDE  AMP ACA+EMI TM+L+ DDLPCMD+DD+RRGKP  HK   E   +L
Subjt:  LCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDDDDVRRGKPACHKASNEGDVIL

A0A5P9Q552 Geranylgeranyl diphosphate synthase 85.9e-3653.8Show/hide
Query:  LRSLNNGFKSNQRRTTFAKAEAFNV---FTDIEKYSLKNNNDPSSLPKFEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLA
        L+ L+NG + +  R  F +A+   +    T +E+   ++ N   SL +F+F +Y+SSK ++VN+AL++ VPL+HP +IHEAMRYSLL  GKR  PVLC+A
Subjt:  LRSLNNGFKSNQRRTTFAKAEAFNV---FTDIEKYSLKNNNDPSSLPKFEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLA

Query:  SCELVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDDDDVRRGKPACHKASNEGDVIL
        SCELVGGDE+ AMP+ACA+EMI TM+L+ DDLPCMD+DD+RRGKP  HK   E   IL
Subjt:  SCELVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDDDDVRRGKPACHKASNEGDVIL

V4ST05 Uncharacterized protein3.4e-3668.14Show/hide
Query:  LPKFEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDDDDVRRGKP
        LP F+F++Y++SK KRVN+AL++TV L+HP +IHEAMRYSLL  GKR  PVLC+ASCELVGGDE+ AMPVACA+EMI TM+L+ DDLPCMD+DD RRGKP
Subjt:  LPKFEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDDDDVRRGKP

Query:  ACHKASNEGDVIL
          HK   E   IL
Subjt:  ACHKASNEGDVIL

SwissProt top hitse value%identityAlignment
A0A0U3BRC5 Geranylfarnesyl diphosphate synthase, chloroplastic1.5e-3359.46Show/hide
Query:  KFEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDDDDVRRGKPAC
        +F+FK Y+  KI  VN+AL+  +P++ P +IHEAMRYSLLL GKR CP++CLA+C LVGGDE+ AMP A A+EMI  M+LM DDLPCMD+DD+RRG+P+ 
Subjt:  KFEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDDDDVRRGKPAC

Query:  HKASNEGDVIL
        H    EG  +L
Subjt:  HKASNEGDVIL

O04046 Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 24.0e-3462.73Show/hide
Query:  FEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDDDDVRRGKPACH
        FEF  Y+ SK + VN+AL + +P+  P +IHEAMRY++L  GKR  P+LCLASCELVGG E  AMP ACAVEMI TM+L+ DDLPCMD+DD+RRGKP  H
Subjt:  FEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDDDDVRRGKPACH

Query:  KASNEGDVIL
        K   EG  IL
Subjt:  KASNEGDVIL

P34802 Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic9.0e-3460.17Show/hide
Query:  NDPSSLPKFEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDDDDV
        ++PSS   F+F  Y+ +K + VN+AL+  VPL+ P +IHEAMRYSLL  GKR  PVLC+A+CELVGG+E+ AMP ACAVEMI TM+L+ DDLPCMD+DD+
Subjt:  NDPSSLPKFEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDDDDV

Query:  RRGKPACHKASNEGDVIL
        RRGKP  HK   E   +L
Subjt:  RRGKPACHKASNEGDVIL

Q43133 Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic9.0e-3458.68Show/hide
Query:  KNNNDPSSLPKFEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDD
        ++NN  SS   F+F  Y+  K   VN+AL+  VPL+ P +IHEAMRYSLL  GKR  PVLC+A+CELVGG+E+ AMP  CAVEMI TM+L+ DDLPCMD+
Subjt:  KNNNDPSSLPKFEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDD

Query:  DDVRRGKPACHKASNEGDVIL
        DD+RRGKP  HK   E   +L
Subjt:  DDVRRGKPACHKASNEGDVIL

Q94ID7 Geranylgeranyl pyrophosphate synthase, chloroplastic4.8e-3548.73Show/hide
Query:  FHPLRSLNNGFKSNQRRTTFAKAEAFNVFTDIEKYSLKNNNDPSSLPKFEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLA
        F+PL+SL   F   +     +   A  + T  E+   +  N+P   P F+FK Y+  K   +N+AL   +PLQ P +IHE+MRYSLL  GKR  P LCLA
Subjt:  FHPLRSLNNGFKSNQRRTTFAKAEAFNVFTDIEKYSLKNNNDPSSLPKFEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLA

Query:  SCELVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDDDDVRRGKPACHKASNEGDVIL
        +CELVGG+++ AMP ACAVEMI TM+L+ DDLPCMD+DD+RRGKP  H    E   +L
Subjt:  SCELVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDDDDVRRGKPACHKASNEGDVIL

Arabidopsis top hitse value%identityAlignment
AT2G18620.1 Terpenoid synthases superfamily protein6.0e-3360Show/hide
Query:  FEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDDDDVRRGKPACH
        F+F  Y+  K   VNEAL+  V L+ P +IHEA+RYSLL  GKR  PVLC+A+CELVGG+E+ A+P ACAVEMI TM+L+ DDLPCMD+DD+RRGKP  H
Subjt:  FEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDDDDVRRGKPACH

Query:  KASNEGDVIL
        K   E   +L
Subjt:  KASNEGDVIL

AT2G18640.1 geranylgeranyl pyrophosphate synthase 41.0e-3248.39Show/hide
Query:  LRSLNNGFKSNQRRTTFAKAEAFNVFTDIEKYSLKNNNDPSSLPKFEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCE
        +R L+   KS      FA+ +    F D     L N  D      F+FK Y+ SK + +N AL++ +PL  P  IH+AMRY++L  GKR  P+LCLA+CE
Subjt:  LRSLNNGFKSNQRRTTFAKAEAFNVFTDIEKYSLKNNNDPSSLPKFEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCE

Query:  LVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDDDDVRRGKPACHKASNEGDVIL
        LVGG+E  A+  ACAVEMI TM+L+ DDLPCMD+DD+RRGKP  HK   E   IL
Subjt:  LVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDDDDVRRGKPACHKASNEGDVIL

AT2G23800.1 geranylgeranyl pyrophosphate synthase 22.9e-3562.73Show/hide
Query:  FEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDDDDVRRGKPACH
        FEF  Y+ SK + VN+AL + +P+  P +IHEAMRY++L  GKR  P+LCLASCELVGG E  AMP ACAVEMI TM+L+ DDLPCMD+DD+RRGKP  H
Subjt:  FEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDDDDVRRGKPACH

Query:  KASNEGDVIL
        K   EG  IL
Subjt:  KASNEGDVIL

AT3G29430.1 Terpenoid synthases superfamily protein5.1e-3258.82Show/hide
Query:  NNDPSSLPKFEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDDDD
        +ND +S   F+FK Y+  K + V+ ALN +VPLQ P  I EA+RYSLL  GKR  P+LC+A+CELVGGDEA AM  ACAVEMI T +L+ DDLPCMDD D
Subjt:  NNDPSSLPKFEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDDDD

Query:  VRRGKPACHKASNEGDVIL
        +RRGKP  HK   E   +L
Subjt:  VRRGKPACHKASNEGDVIL

AT4G36810.1 geranylgeranyl pyrophosphate synthase 16.4e-3560.17Show/hide
Query:  NDPSSLPKFEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDDDDV
        ++PSS   F+F  Y+ +K + VN+AL+  VPL+ P +IHEAMRYSLL  GKR  PVLC+A+CELVGG+E+ AMP ACAVEMI TM+L+ DDLPCMD+DD+
Subjt:  NDPSSLPKFEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLASCELVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDDDDV

Query:  RRGKPACHKASNEGDVIL
        RRGKP  HK   E   +L
Subjt:  RRGKPACHKASNEGDVIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTTGCCAAAGCTTTGTTTGGATTTCATCCTTTGAGGTCACTCAACAATGGCTTCAAAAGCAACCAAAGAAGAACAACATTTGCCAAAGCTGAAGCCTTTAATGT
ATTCACCGACATAGAGAAGTACTCATTGAAGAATAACAATGATCCTTCTTCTTTGCCAAAATTTGAATTCAAAGACTACTTGAGCTCCAAGATAAAGCGAGTCAATGAGG
CTTTGAATCAAACAGTGCCATTGCAGCACCCTACGCAGATCCATGAGGCCATGAGATACTCTCTTTTGTTGCCTGGAAAGCGCTTTTGTCCCGTTCTTTGCCTTGCATCG
TGCGAACTCGTCGGTGGAGATGAAGCTCAAGCCATGCCTGTTGCTTGCGCCGTTGAGATGATCAAGACCATGGCGTTGATGCTTGATGATCTTCCTTGCATGGACGACGA
TGATGTTCGTCGCGGGAAGCCTGCGTGCCATAAGGCTTCTAATGAAGGAGATGTGATTTTGTTCTCGAACTTGGAAGCACAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTTGCCAAAGCTTTGTTTGGATTTCATCCTTTGAGGTCACTCAACAATGGCTTCAAAAGCAACCAAAGAAGAACAACATTTGCCAAAGCTGAAGCCTTTAATGT
ATTCACCGACATAGAGAAGTACTCATTGAAGAATAACAATGATCCTTCTTCTTTGCCAAAATTTGAATTCAAAGACTACTTGAGCTCCAAGATAAAGCGAGTCAATGAGG
CTTTGAATCAAACAGTGCCATTGCAGCACCCTACGCAGATCCATGAGGCCATGAGATACTCTCTTTTGTTGCCTGGAAAGCGCTTTTGTCCCGTTCTTTGCCTTGCATCG
TGCGAACTCGTCGGTGGAGATGAAGCTCAAGCCATGCCTGTTGCTTGCGCCGTTGAGATGATCAAGACCATGGCGTTGATGCTTGATGATCTTCCTTGCATGGACGACGA
TGATGTTCGTCGCGGGAAGCCTGCGTGCCATAAGGCTTCTAATGAAGGAGATGTGATTTTGTTCTCGAACTTGGAAGCACAGTAA
Protein sequenceShow/hide protein sequence
MAVAKALFGFHPLRSLNNGFKSNQRRTTFAKAEAFNVFTDIEKYSLKNNNDPSSLPKFEFKDYLSSKIKRVNEALNQTVPLQHPTQIHEAMRYSLLLPGKRFCPVLCLAS
CELVGGDEAQAMPVACAVEMIKTMALMLDDLPCMDDDDVRRGKPACHKASNEGDVILFSNLEAQ