CuGenDBv2

Gene ID	Spg008675
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	CHZ domain-containing protein
Genome location	scaffold10:34823695..34826546
RNA-Seq Expression	Spg008675
Synteny	Spg008675
Gene Ontology terms	GO:0005634 - nucleus (cellular component) GO:0016874 - ligase activity (molecular function)
InterPro domains	IPR037647 - HIRA-interacting protein 3

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6578974.1 hypothetical protein SDJN03_23422, partial [Cucurbita argyrosperma subsp. sororia]

2.8e-30

92.41

Show/hide

Query:  MAEELQDNDAPNEEAMDVAGDIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCLETYALDVHKRYIKQCLVKVM
        MAEELQDNDAPNEEAMDV   IETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLC+ETYALDVHKRYIKQCLVK +
Subjt:  MAEELQDNDAPNEEAMDVAGDIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCLETYALDVHKRYIKQCLVKVM

KAG7016498.1 hypothetical protein SDJN02_21607 [Cucurbita argyrosperma subsp. argyrosperma]

2.8e-30

92.41

Show/hide

Query:  MAEELQDNDAPNEEAMDVAGDIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCLETYALDVHKRYIKQCLVKVM
        MAEELQDNDAPNEEAMDV   IETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLC+ETYALDVHKRYIKQCLVK +
Subjt:  MAEELQDNDAPNEEAMDVAGDIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCLETYALDVHKRYIKQCLVKVM

XP_022939456.1 DNA ligase 1-like isoform X1 [Cucurbita moschata]

2.8e-30

92.41

Show/hide

Query:  MAEELQDNDAPNEEAMDVAGDIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCLETYALDVHKRYIKQCLVKVM
        MAEELQDNDAPNEEAMDV   IETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLC+ETYALDVHKRYIKQCLVK +
Subjt:  MAEELQDNDAPNEEAMDVAGDIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCLETYALDVHKRYIKQCLVKVM

XP_023551365.1 glutamic acid-rich protein-like isoform X1 [Cucurbita pepo subsp. pepo]

2.8e-30

92.41

Show/hide

Query:  MAEELQDNDAPNEEAMDVAGDIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCLETYALDVHKRYIKQCLVKVM
        MAEELQDNDAPNEEAMDV   IETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLC+ETYALDVHKRYIKQCLVK +
Subjt:  MAEELQDNDAPNEEAMDVAGDIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCLETYALDVHKRYIKQCLVKVM

XP_023551366.1 glutamic acid-rich protein-like isoform X2 [Cucurbita pepo subsp. pepo]

2.8e-30

92.41

Show/hide

Query:  MAEELQDNDAPNEEAMDVAGDIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCLETYALDVHKRYIKQCLVKVM
        MAEELQDNDAPNEEAMDV   IETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLC+ETYALDVHKRYIKQCLVK +
Subjt:  MAEELQDNDAPNEEAMDVAGDIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCLETYALDVHKRYIKQCLVKVM

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CJ49 DNA ligase 1

5.7e-29

Show/hide

Query:  MAEELQDND-APNEEAMDVAGDIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCLETYALDVHKRYIKQCLVKVM
        MAEELQDND APNE+AMD   DIE KIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCLETYALDVHKRYIKQCLVK +
Subjt:  MAEELQDND-APNEEAMDVAGDIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCLETYALDVHKRYIKQCLVKVM

A0A6J1FFY5 DNA ligase 1-like isoform X1

1.4e-30

92.41

Show/hide

Query:  MAEELQDNDAPNEEAMDVAGDIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCLETYALDVHKRYIKQCLVKVM
        MAEELQDNDAPNEEAMDV   IETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLC+ETYALDVHKRYIKQCLVK +
Subjt:  MAEELQDNDAPNEEAMDVAGDIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCLETYALDVHKRYIKQCLVKVM

A0A6J1FGV2 glutamic acid-rich protein-like isoform X2

1.4e-30

92.41

Show/hide

Query:  MAEELQDNDAPNEEAMDVAGDIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCLETYALDVHKRYIKQCLVKVM
        MAEELQDNDAPNEEAMDV   IETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLC+ETYALDVHKRYIKQCLVK +
Subjt:  MAEELQDNDAPNEEAMDVAGDIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCLETYALDVHKRYIKQCLVKVM

A0A6J1JTY1 glutamic acid-rich protein-like isoform X1

2.6e-29

89.87

Show/hide

Query:  MAEELQDNDAPNEEAMDVAGDIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCLETYALDVHKRYIKQCLVKVM
        MAEELQD DAPNEEAMDV   IETKIQNAMLSRVSHFKEQADSLTFEGVRRLLE DLC+ETYALDVHKRYIKQCLVK +
Subjt:  MAEELQDNDAPNEEAMDVAGDIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCLETYALDVHKRYIKQCLVKVM

A0A6J1K3E3 glutamic acid-rich protein-like isoform X2

2.6e-29

89.87

Show/hide

Query:  MAEELQDNDAPNEEAMDVAGDIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCLETYALDVHKRYIKQCLVKVM
        MAEELQD DAPNEEAMDV   IETKIQNAMLSRVSHFKEQADSLTFEGVRRLLE DLC+ETYALDVHKRYIKQCLVK +
Subjt:  MAEELQDNDAPNEEAMDVAGDIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCLETYALDVHKRYIKQCLVKVM

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G44780.1 CONTAINS InterPro DOMAIN/s: Histone chaperone domain CHZ (InterPro:IPR019098)

2.1e-07

45.9

Show/hide

Query:  AGDIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCLETYALDVHKRYIKQCLVKVM
        A +IE KI  A+ SRV++ + +AD  T   VRR+LE+D+ LE   LDV+K ++K+ LVK +
Subjt:  AGDIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCLETYALDVHKRYIKQCLVKVM

AT1G44780.2 INVOLVED IN: biological_process unknown

2.1e-07

45.9

Show/hide

Query:  AGDIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCLETYALDVHKRYIKQCLVKVM
        A +IE KI  A+ SRV++ + +AD  T   VRR+LE+D+ LE   LDV+K ++K+ LVK +
Subjt:  AGDIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCLETYALDVHKRYIKQCLVKVM

AT4G08310.1 FUNCTIONS IN: molecular_function unknown

7.4e-13

43.96

Show/hide

Query:  LQDNDAPNEEAMDVAG----------------DIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCLETYALDVHKRYIKQCLVKVM
        + D D+    AM+++G                DIE++I  AM SRV++ +++AD+ TFEGVRRLLE+DL LE +ALDVHK ++KQ LV+ +
Subjt:  LQDNDAPNEEAMDVAG----------------DIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCLETYALDVHKRYIKQCLVKVM

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

AGCAGAGTCATTCTTGGAAAGTCCTTACACACTTTCAGAGCCCATAATTTCTTCCTCGGCACAGAGAATCGGTGCGAGTCGCAGAAGAGCAAAATGGCGGAGGAATTACA
GGACAACGATGCTCCTAACGAAGAGGCCATGGATGTCGCCGGTGATATAGAGACGAAGATTCAAAACGCTATGCTCTCTCGCGTCTCTCACTTCAAGGAACAAGCCGACT
CTTTAACTTTTGAGGGGGTTAGAAGATTGTTAGAAAAGGACTTGTGTTTGGAGACGTATGCTTTAGATGTGCATAAAAGATATATCAAGCAGTGTTTGGTGAAGGTAATG
CTTTCTTCTTTCTGTATATCTGAGATCTTGTTTTTCTTGGAGGTGGCTTCCTATTTTTCTGTTATGCCTTCTTTTCAACGATATCATTCTTCACTCAAATCAAGTTGCCA
AAGATCCTCCCAACCCCCAAAAGAAAAACTACACACACATCAACTTAGTAGTCCTGTCACCTGTGTCAGATGTCTTGTTTCACCCAGGGAACTCCCCCTGTTCTCGTTTG
GGTTCTTCCATGCTTTGTCTGATAGGGAAATGGTGGATGTGACGTCTCTTCTATCTTTGATCAAGGAGTTTGAGTTAAGATTGGGGAGGAGAGATGTTCGGTGTTGCAGC
CACAATCCTTCAGACAGTGTTAACACCTATGATAGGCTTTTGAGAAAGAAGCCTTCCATTGTTGGCCTATTTTGTTGCATTCTTTGTCGGAAGGTGGAGGAAGATCTGGA
TCACATTCTTTGGAGCCGGGAATTTGCTCGGTCTATTTGGGGCCGTTTCTTTGATACGTTTGGGTTGCAAGGGACGGCTTATTCAAATTATAGGGAGTTGATCGACAAGT
TCCTCCTCCATCCGCCCTTCCGTGAGAAAGGAAGATATCTATGGCAATCGGGGATGTGTGCATTGTTATGGAATCTTTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

SRVILGKSLHTFRAHNFFLGTENRCESQKSKMAEELQDNDAPNEEAMDVAGDIETKIQNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCLETYALDVHKRYIKQCLVKVM
LSSFCISEILFFLEVASYFSVMPSFQRYHSSLKSSCQRSSQPPKEKLHTHQLSSPVTCVRCLVSPRELPLFSFGFFHALSDREMVDVTSLLSLIKEFELRLGRRDVRCCS
HNPSDSVNTYDRLLRKKPSIVGLFCCILCRKVEEDLDHILWSREFARSIWGRFFDTFGLQGTAYSNYRELIDKFLLHPPFREKGRYLWQSGMCALLWNL

Spg008675 (gene) of Sponge gourd (cylindrica) v1 genome