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Spg008734 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008734
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein SIS2
Genome locationscaffold10:32142823..32145194
RNA-Seq ExpressionSpg008734
SyntenySpg008734
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601944.1 hypothetical protein SDJN03_07177, partial [Cucurbita argyrosperma subsp. sororia]2.2e-5989.66Show/hide
Query:  MSIPIPNTSIPMARLLISTRTFPFPPLPVAPARAFFRPYRLSPAVRFSGDPSTSRALRVVTTRAGASTSSYIFAFSIPFSLILVTVLTALKIGDNLDKKF
        M+ PIP TS  MARLLISTR FPFPPLP+ PARA FRP +LSPAVRFSGDPS +RALRVVTTRAGASTSSYIFAFSIPFSLILVT LTALKIGDNLDKKF
Subjt:  MSIPIPNTSIPMARLLISTRTFPFPPLPVAPARAFFRPYRLSPAVRFSGDPSTSRALRVVTTRAGASTSSYIFAFSIPFSLILVTVLTALKIGDNLDKKF

Query:  LEELALNQAILEEDEENKDGSSEISFEEKPALPRTRNRPKREAEV
        LEELALNQAI+EEDEENKDGSSEISFEEKPALPRTRNRPKREAEV
Subjt:  LEELALNQAILEEDEENKDGSSEISFEEKPALPRTRNRPKREAEV

KAG7032638.1 hypothetical protein SDJN02_06688 [Cucurbita argyrosperma subsp. argyrosperma]1.7e-5989.66Show/hide
Query:  MSIPIPNTSIPMARLLISTRTFPFPPLPVAPARAFFRPYRLSPAVRFSGDPSTSRALRVVTTRAGASTSSYIFAFSIPFSLILVTVLTALKIGDNLDKKF
        M+ PIP TS  MARLLISTR FPFPPLP+ PARAFFRP +LSPAVRFSGDPS +RALRVVTTRAGASTSSYIFAFSIPFSLILVT LTALKIGDNLDKKF
Subjt:  MSIPIPNTSIPMARLLISTRTFPFPPLPVAPARAFFRPYRLSPAVRFSGDPSTSRALRVVTTRAGASTSSYIFAFSIPFSLILVTVLTALKIGDNLDKKF

Query:  LEELALNQAILEEDEENKDGSSEISFEEKPALPRTRNRPKREAEV
        LEELALNQAI+EEDEENKDGSSEISFE KPALPRTRNRPKREAEV
Subjt:  LEELALNQAILEEDEENKDGSSEISFEEKPALPRTRNRPKREAEV

XP_022961614.1 uncharacterized protein LOC111462310 [Cucurbita moschata]3.8e-5989.58Show/hide
Query:  MSIPIPNTSIPMARLLISTRTFPFPPLPVAPARAFFRPYRLSPAVRFSGDPSTSRALRVVTTRAGASTSSYIFAFSIPFSLILVTVLTALKIGDNLDKKF
        M+ PIP TS  MARLLISTR FPFPPLP+ PARAFFRP +LSPAVRFSGDPS +RALRVVTTRAGASTSSYIFAFSIPFSLILVT LTALKIGDNLDKKF
Subjt:  MSIPIPNTSIPMARLLISTRTFPFPPLPVAPARAFFRPYRLSPAVRFSGDPSTSRALRVVTTRAGASTSSYIFAFSIPFSLILVTVLTALKIGDNLDKKF

Query:  LEELALNQAILEEDEENKDGSSEISFEEKPALPRTRNRPKREAE
        LEELALNQAI+EEDEENKDGSSEI FEEKPALPRTRNRPKREAE
Subjt:  LEELALNQAILEEDEENKDGSSEISFEEKPALPRTRNRPKREAE

XP_023525740.1 uncharacterized protein LOC111789252 [Cucurbita pepo subsp. pepo]7.2e-5893.28Show/hide
Query:  MARLLISTRTFPFPPLPVAPARAFFRPYRLSPAVRFSGDPSTSRALRVVTTRAGASTSSYIFAFSIPFSLILVTVLTALKIGDNLDKKFLEELALNQAIL
        MARLLISTR FPFPPLP+ PARAFFRP +LSPAVRFSGDPS +RALRVVTTRAGASTSSYIFAFSIPFSLILVT LTALKIGDNLDKKFLEELALNQAI+
Subjt:  MARLLISTRTFPFPPLPVAPARAFFRPYRLSPAVRFSGDPSTSRALRVVTTRAGASTSSYIFAFSIPFSLILVTVLTALKIGDNLDKKFLEELALNQAIL

Query:  EEDEENKDGSSEISFEEKPALPRTRNRPKREAEV
        EEDEENKDGSSEISFEEKPALPRTRNRPKREAEV
Subjt:  EEDEENKDGSSEISFEEKPALPRTRNRPKREAEV

XP_038875344.1 uncharacterized protein LOC120067823 [Benincasa hispida]2.0e-5586.9Show/hide
Query:  MSIPIPNTSIPMARLLISTRTFPFPPLPVAPARAFFRPYRLSPAVRFSGDPSTSRALRVVTTRAGASTSSYIFAFSIPFSLILVTVLTALKIGDNLDKKF
        MSIPIP TSI MA+LLISTR FPF  L VAP RAFFRP   SPAV FSG PSTSR LRVVTTRAGASTSSYIFAFSIP SLIL+TVLTALKIGDNLDKKF
Subjt:  MSIPIPNTSIPMARLLISTRTFPFPPLPVAPARAFFRPYRLSPAVRFSGDPSTSRALRVVTTRAGASTSSYIFAFSIPFSLILVTVLTALKIGDNLDKKF

Query:  LEELALNQAILEEDEENKDGSSEISFEEKPALPRTRNRPKREAEV
        LEELALNQAI+EEDEENKD  SEISFEEKPALPRTRNRPKREAEV
Subjt:  LEELALNQAILEEDEENKDGSSEISFEEKPALPRTRNRPKREAEV

TrEMBL top hitse value%identityAlignment
A0A1S3CQ37 uncharacterized protein LOC1035034022.1e-4780.6Show/hide
Query:  MARLLISTRTFPFPPLPVAPARAFFRPYRLSPAVRFSGDPSTSRALRVVTTRAGASTSSYIFAFSIPFSLILVTVLTALKIGDNLDKKFLEELALNQAIL
        MAR LISTR FPF  LP+AP RAFFRP+  SP VRFS  PS SR LRVV TRAGASTSSYIFAFSIP SLIL+TVLTALKIGDNLDKKFLEELALNQAI+
Subjt:  MARLLISTRTFPFPPLPVAPARAFFRPYRLSPAVRFSGDPSTSRALRVVTTRAGASTSSYIFAFSIPFSLILVTVLTALKIGDNLDKKFLEELALNQAIL

Query:  EEDEENKDGSSEISFEEKPALPRTRNRPKREAEV
        EEDE+ +   +EISFEEKP LPRTRNRPKREAEV
Subjt:  EEDEENKDGSSEISFEEKPALPRTRNRPKREAEV

A0A6J1FJ66 uncharacterized protein LOC1114447531.7e-4985.19Show/hide
Query:  MARLLISTRT-FPFPPLPVAPARAFFRPYRLSPAVRFSGDPSTSRALRVVTTRAGASTSSYIFAFSIPFSLILVTVLTALKIGDNLDKKFLEELALNQAI
        MARLLISTR  FP   LPVAPARAFFRP +LSPAVRF GD S  + LR+VTTRAGASTSSYIFAFSIPFSL+LVT LTALKIGDNLDKKFLEELALNQAI
Subjt:  MARLLISTRT-FPFPPLPVAPARAFFRPYRLSPAVRFSGDPSTSRALRVVTTRAGASTSSYIFAFSIPFSLILVTVLTALKIGDNLDKKFLEELALNQAI

Query:  LEEDEENKDGSSEISFEEKPALPRTRNRPKREAEV
        +EEDEENKD  S ISFEEKPALPRTRNRPKREAEV
Subjt:  LEEDEENKDGSSEISFEEKPALPRTRNRPKREAEV

A0A6J1HEK5 uncharacterized protein LOC1114623101.8e-5989.58Show/hide
Query:  MSIPIPNTSIPMARLLISTRTFPFPPLPVAPARAFFRPYRLSPAVRFSGDPSTSRALRVVTTRAGASTSSYIFAFSIPFSLILVTVLTALKIGDNLDKKF
        M+ PIP TS  MARLLISTR FPFPPLP+ PARAFFRP +LSPAVRFSGDPS +RALRVVTTRAGASTSSYIFAFSIPFSLILVT LTALKIGDNLDKKF
Subjt:  MSIPIPNTSIPMARLLISTRTFPFPPLPVAPARAFFRPYRLSPAVRFSGDPSTSRALRVVTTRAGASTSSYIFAFSIPFSLILVTVLTALKIGDNLDKKF

Query:  LEELALNQAILEEDEENKDGSSEISFEEKPALPRTRNRPKREAE
        LEELALNQAI+EEDEENKDGSSEI FEEKPALPRTRNRPKREAE
Subjt:  LEELALNQAILEEDEENKDGSSEISFEEKPALPRTRNRPKREAE

A0A6J1JTZ0 uncharacterized protein LOC1114874911.2e-5587.41Show/hide
Query:  MSIPIPNTSIPMARLLISTRTFPFPPLPVAPARAFFRPYRLSPAVRFSGDPSTSRALRVVTTRAGASTSSYIFAFSIPFSLILVTVLTALKIGDNLDKKF
        M+ PIP TS  MARLLISTR FPF   P+ PARAFFRP +LSPAVRFSGDPS +R LRVVTTRAGASTSSYIFAFSIPFSLILVT LTALKIGDNLDKKF
Subjt:  MSIPIPNTSIPMARLLISTRTFPFPPLPVAPARAFFRPYRLSPAVRFSGDPSTSRALRVVTTRAGASTSSYIFAFSIPFSLILVTVLTALKIGDNLDKKF

Query:  LEELALNQAILEEDEENKDGSSEISFEEKPALPRTRNRPKREA
        LEELALNQAI+EEDEENKDGSSEISFEEKPALPRTRNRPKREA
Subjt:  LEELALNQAILEEDEENKDGSSEISFEEKPALPRTRNRPKREA

A0A6J1K146 uncharacterized protein LOC1114896907.3e-4883.7Show/hide
Query:  MARLLISTRT-FPFPPLPVAPARAFFRPYRLSPAVRFSGDPSTSRALRVVTTRAGASTSSYIFAFSIPFSLILVTVLTALKIGDNLDKKFLEELALNQAI
        MARLLISTR  FP   LPV PARA FRP +LSPAVRF GD S  + LR+VTTRAGASTSSYIFAFSI FSLILVT LTALKIGDNLDKKFLEELALNQAI
Subjt:  MARLLISTRT-FPFPPLPVAPARAFFRPYRLSPAVRFSGDPSTSRALRVVTTRAGASTSSYIFAFSIPFSLILVTVLTALKIGDNLDKKFLEELALNQAI

Query:  LEEDEENKDGSSEISFEEKPALPRTRNRPKREAEV
        +EEDEENKD  S ISFEEKPALPRTRNRPKREAEV
Subjt:  LEEDEENKDGSSEISFEEKPALPRTRNRPKREAEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G31560.1 high chlorophyll fluorescence 1536.5e-1744.29Show/hide
Query:  MARLLISTRTFPFPPLPVAPARAFFRPYRLSPAVRF----SGDPSTSRALR--VVTTRAGASTSSYIFAFSIPFSLILVTVLTALKIGDNLDKKFLEELA
        MARL +S    P  P  ++   +  +P    PA  F    +G    +R +R   V TRAG STSSY+ AF+IP +LI  TV T++KI D LD+ FLE++A
Subjt:  MARLLISTRTFPFPPLPVAPARAFFRPYRLSPAVRF----SGDPSTSRALR--VVTTRAGASTSSYIFAFSIPFSLILVTVLTALKIGDNLDKKFLEELA

Query:  LNQAILEEDEENKDGSSEISFE---EKPALPRTRNRPKRE
        LNQAI +  E+ ++G  +IS +   ++P L RTRNRPKRE
Subjt:  LNQAILEEDEENKDGSSEISFE---EKPALPRTRNRPKRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATTCCAATTCCCAACACTTCCATACCTATGGCGAGGCTCCTTATCTCCACCCGAACCTTCCCCTTTCCCCCTCTTCCCGTCGCTCCGGCACGGGCGTTCTTCAG
ACCCTACAGATTGTCACCGGCGGTCAGATTCTCCGGCGACCCATCGACCTCCAGAGCCCTACGAGTCGTGACGACTCGTGCCGGCGCCAGTACCAGTAGTTACATCTTCG
CCTTCTCTATACCTTTCTCTCTTATTCTCGTCACTGTCCTCACTGCTCTTAAAATCGGCGATAACCTCGACAAGAAGTTTCTTGAAGAGCTTGCTCTTAACCAAGCCATC
CTGGAGGAAGATGAGGAGAACAAAGATGGTAGTTCAGAAATATCTTTTGAAGAAAAACCAGCTCTTCCACGAACTCGAAACCGCCCTAAAAGGGAAGCTGAGGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCATTCCAATTCCCAACACTTCCATACCTATGGCGAGGCTCCTTATCTCCACCCGAACCTTCCCCTTTCCCCCTCTTCCCGTCGCTCCGGCACGGGCGTTCTTCAG
ACCCTACAGATTGTCACCGGCGGTCAGATTCTCCGGCGACCCATCGACCTCCAGAGCCCTACGAGTCGTGACGACTCGTGCCGGCGCCAGTACCAGTAGTTACATCTTCG
CCTTCTCTATACCTTTCTCTCTTATTCTCGTCACTGTCCTCACTGCTCTTAAAATCGGCGATAACCTCGACAAGAAGTTTCTTGAAGAGCTTGCTCTTAACCAAGCCATC
CTGGAGGAAGATGAGGAGAACAAAGATGGTAGTTCAGAAATATCTTTTGAAGAAAAACCAGCTCTTCCACGAACTCGAAACCGCCCTAAAAGGGAAGCTGAGGTATAA
Protein sequenceShow/hide protein sequence
MSIPIPNTSIPMARLLISTRTFPFPPLPVAPARAFFRPYRLSPAVRFSGDPSTSRALRVVTTRAGASTSSYIFAFSIPFSLILVTVLTALKIGDNLDKKFLEELALNQAI
LEEDEENKDGSSEISFEEKPALPRTRNRPKREAEV