; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg008740 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008740
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionF-box protein SKIP28
Genome locationscaffold10:37571851..37573443
RNA-Seq ExpressionSpg008740
SyntenySpg008740
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR017900 - 4Fe-4S ferredoxin, iron-sulphur binding, conserved site
IPR032675 - Leucine-rich repeat domain superfamily
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579265.1 F-box protein SKIP28, partial [Cucurbita argyrosperma subsp. sororia]3.9e-13275.23Show/hide
Query:  MSENQEPPNPAVAAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI
        MSEN++ PN     GSSSP +RI AGPPHEALF VLSYLPL ELLSM AVCVSLRDAVE DVLPWLH+VVD PLS RL+D IL RIARKADGRLRTLALI
Subjt:  MSENQEPPNPAVAAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKIFCIYTPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPL
        NCFKISDS LH+VVE NPLLTK        LYVPGC+SLTP GV+RAV+TLSQHSHNL SLMI GIY I+ NEHLEVLK HLL NRS+Q  Q+QQQ++ L
Subjt:  NCFKISDSGLHEVVEKNPLLTKIFCIYTPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPL

Query:  LYHEYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECN
         +HE+I+ SKLL +EY  MIDV++CPKC +IGRVYDCSRERCKIKQE+K  A+CRGCS CV RCEECGGCVD DE EEAVCA  LC+SCWLQLPKCN CN
Subjt:  LYHEYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECN

Query:  RPYCKRHRDNVTVSSSAAGFVCEVCLE
        RPYC RH  NV VSS+AAGFVCEVC+E
Subjt:  RPYCKRHRDNVTVSSSAAGFVCEVCLE

XP_004150124.1 F-box protein SKIP28 [Cucumis sativus]1.7e-13271.07Show/hide
Query:  GPESSSPFNFPPPFEAKELDIFVKAAAEKEDEELIDMSENQEPPNPAVAAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLP
        GPESS          AKEL     +AAEK+DEEL  MSENQEPPNPA  A         EAGPPHEALF V++YLPL ELLS+SAVCVSLRDAVE DVLP
Subjt:  GPESSSPFNFPPPFEAKELDIFVKAAAEKEDEELIDMSENQEPPNPAVAAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLP

Query:  WLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKIFCIYTPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIH
        WLHIVVD  LS RLSD  L RIARKA GRLRTLALINCFKISDSGLHEVVE NPLLTK        LYVPGC+SLTP GVVRAVKTLSQ SHNLK+LMI 
Subjt:  WLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKIFCIYTPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIH

Query:  GIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRC
        GIY I+ N+HLEVL+ HLL NRS    Q+ +Q    LYHE++DR +LLS ++ P+IDVQICPKC DI  VYDCSRERCKIKQ E L ADCRGC  C+ RC
Subjt:  GIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRC

Query:  EECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECNRPYCKRHRDNVTVSSSAAGFVCEVCLE
        EECGGCVDDDE EEA+C+  LCSSCW QLPKCN CNRPYCKRHRDN  VSSS AGFVCE+CLE
Subjt:  EECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECNRPYCKRHRDNVTVSSSAAGFVCEVCLE

XP_022939676.1 F-box protein SKIP28 [Cucurbita moschata]5.6e-13175.23Show/hide
Query:  MSENQEPPNPAVAAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI
        MSEN + PN     GSSSP +RI AGPPHEALF VLSYLPL ELLSM AVCVSLRDAV  DVLPWLH+VVD PLS RL+D IL RIARKADGRLRTLALI
Subjt:  MSENQEPPNPAVAAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKIFCIYTPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPL
        NCFKISDS LHEVVE NPLLTK        LYVPGC+SLTP GV+RAV+TLSQHSHNL SLMI GIY I+ NEHLEVLK HLL NRSQQ  Q+QQQ++ L
Subjt:  NCFKISDSGLHEVVEKNPLLTKIFCIYTPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPL

Query:  LYHEYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECN
         +HE+I+ SKLL ++Y  MIDV++CPKC +IGRVYDCSRERCKIKQE+K  A+CRGCS CV RCEECGGCVD DE EEAVCA  LC+SCWLQLPKCN CN
Subjt:  LYHEYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECN

Query:  RPYCKRHRDNVTVSSSAAGFVCEVCLE
        RPYC RH  NV  SSSAAGFVCEVC+E
Subjt:  RPYCKRHRDNVTVSSSAAGFVCEVCLE

XP_023551551.1 F-box protein SKIP28-like [Cucurbita pepo subsp. pepo]3.9e-13275.23Show/hide
Query:  MSENQEPPNPAVAAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI
        MSEN++ PN     GSSSP +RI AGPPHEALF VLSYLPL E+LSM AVCVSLRDAVE DVLPWLH+ VD PLS RL+D IL RIARKADGRLRTLALI
Subjt:  MSENQEPPNPAVAAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKIFCIYTPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPL
        NCFKISDS LHEVVE NPLLTK        LYVPGC+SLTP GV+RAV+TLSQHSHNL SLMI GIY I+ NEHLEVLK HLL N SQQ  Q+QQQ+Q  
Subjt:  NCFKISDSGLHEVVEKNPLLTKIFCIYTPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPL

Query:  LYHEYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECN
        LYH+YI+  KLL +EY  MIDV++CPKC +IG+VYDCSRERCKIKQE+   A+CRGCS CV RCEECGGCVD DE EEAVCA  LC+SCWLQLPKCN CN
Subjt:  LYHEYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECN

Query:  RPYCKRHRDNVTVSSSAAGFVCEVCLE
        RPYC RHR NV VSSSAAGFVCEVC+E
Subjt:  RPYCKRHRDNVTVSSSAAGFVCEVCLE

XP_038906463.1 F-box protein SKIP28 [Benincasa hispida]4.7e-14676.1Show/hide
Query:  TGPESSSPFNFPPPFEAKELDIFVKAAAEKEDEELIDMSENQEPPNPAVAAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVL
        TGPESS         EAKEL I + +AAEKEDE++  MSENQEP NPA AAGSS P +RIEAGPPHEALF VLSYLPL ELLSMS+VCVSLRDAVE DVL
Subjt:  TGPESSSPFNFPPPFEAKELDIFVKAAAEKEDEELIDMSENQEPPNPAVAAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVL

Query:  PWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKIFCIYTPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMI
        PWLHIVVD  LS RLSD  L RIARKA GRLRTLALINCFKISDSG HEVVEKNPLLTK        LYVPGC+SLTPGGVVRAVKTLSQHSHNLKSLMI
Subjt:  PWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKIFCIYTPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMI

Query:  HGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTR
         GIY I+ NEHLEVLKCHLL NRS  L Q+++++Q  LY E+IDRSKLLS+E+QP+IDVQICPKC++I  VYDCSRERCKIKQE++L ADCRGC  C+ R
Subjt:  HGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTR

Query:  CEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECNRPYCKRHRDNVTVSSSAAGFVCEVCLE
        CEECGGCVDDDE EEAVCA  LCSSCWLQLPKCN CNRPYC RH  N  VSSS  GFVCE+CLE
Subjt:  CEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECNRPYCKRHRDNVTVSSSAAGFVCEVCLE

TrEMBL top hitse value%identityAlignment
A0A0A0KSU6 F-box domain-containing protein8.4e-13371.07Show/hide
Query:  GPESSSPFNFPPPFEAKELDIFVKAAAEKEDEELIDMSENQEPPNPAVAAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLP
        GPESS          AKEL     +AAEK+DEEL  MSENQEPPNPA  A         EAGPPHEALF V++YLPL ELLS+SAVCVSLRDAVE DVLP
Subjt:  GPESSSPFNFPPPFEAKELDIFVKAAAEKEDEELIDMSENQEPPNPAVAAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLP

Query:  WLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKIFCIYTPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIH
        WLHIVVD  LS RLSD  L RIARKA GRLRTLALINCFKISDSGLHEVVE NPLLTK        LYVPGC+SLTP GVVRAVKTLSQ SHNLK+LMI 
Subjt:  WLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKIFCIYTPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIH

Query:  GIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRC
        GIY I+ N+HLEVL+ HLL NRS    Q+ +Q    LYHE++DR +LLS ++ P+IDVQICPKC DI  VYDCSRERCKIKQ E L ADCRGC  C+ RC
Subjt:  GIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRC

Query:  EECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECNRPYCKRHRDNVTVSSSAAGFVCEVCLE
        EECGGCVDDDE EEA+C+  LCSSCW QLPKCN CNRPYCKRHRDN  VSSS AGFVCE+CLE
Subjt:  EECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECNRPYCKRHRDNVTVSSSAAGFVCEVCLE

A0A5A7TYB5 F-box protein SKIP28 isoform X17.6e-12673.7Show/hide
Query:  MSENQEPPNPAVAAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI
        MSENQEPPNPA  A         EAGPPHEALF V+SYL L ELLSMSAVCVSLRDAVE DVLPWLHIVVD  LS RLSD  L RIARKA GRLRTLALI
Subjt:  MSENQEPPNPAVAAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKIFCIYTPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPL
        +CFKISDSGLHEVVE NPLLTK        LYVPGC+SLTP GVVRAVKT SQHSHNLK+LMI GIY I+N+ HLEVL+ HLL NRSQ   Q+ +Q    
Subjt:  NCFKISDSGLHEVVEKNPLLTKIFCIYTPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPL

Query:  LYHEYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECN
        LYHE++DR  LLS+++ P+IDVQICPKC DI  VYDCSRERCKIKQ E L ADCRGC  C+ RCEECGGCVD DE EEA+C   +CSSCWLQLPKCN CN
Subjt:  LYHEYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECN

Query:  RPYCKRHRDNVTVSSSAAGFVCEVCLE
        RPYCKRHRDN  VSSS AGFVCE+CLE
Subjt:  RPYCKRHRDNVTVSSSAAGFVCEVCLE

A0A6J1CZ11 F-box protein SKIP281.1e-12471.6Show/hide
Query:  MSENQEPPNPAVAAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI
        MS NQE PNPA A       + I+AGPPH+A F VLSYLPL ELLSMSAVCVSLRDAVERD+LPW HI+VD  LS RLSD+IL+RI RKADGRLRTLALI
Subjt:  MSENQEPPNPAVAAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKIFCIYTPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPL
         CFKISDSGLH+VV +NPLL K        LYVPGC+ LTP GVVRAVKTLSQHSHNLKS+MI GIY I+ NEHLEVL+ HL INRSQ     QQQ+Q L
Subjt:  NCFKISDSGLHEVVEKNPLLTKIFCIYTPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPL

Query:  LYHEYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVD--DDEKEEAVCARTLCSSCWLQLPKCNE
        L HEYIDRSKLLSDEYQPMIDVQICPKCN+I RVYDCSRE CKIKQE+KLQADCR C+ C+ RCEECGGCVD  D E EEAVCA +LC+SCWL+LPKCN 
Subjt:  LYHEYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVD--DDEKEEAVCARTLCSSCWLQLPKCNE

Query:  CNRPYCKRHR---------DNVTVSSSAAGFVCEVCLE
        CN+PYC R            +  V +SA GFVCEVCLE
Subjt:  CNRPYCKRHR---------DNVTVSSSAAGFVCEVCLE

A0A6J1FGL5 F-box protein SKIP282.7e-13175.23Show/hide
Query:  MSENQEPPNPAVAAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI
        MSEN + PN     GSSSP +RI AGPPHEALF VLSYLPL ELLSM AVCVSLRDAV  DVLPWLH+VVD PLS RL+D IL RIARKADGRLRTLALI
Subjt:  MSENQEPPNPAVAAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKIFCIYTPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPL
        NCFKISDS LHEVVE NPLLTK        LYVPGC+SLTP GV+RAV+TLSQHSHNL SLMI GIY I+ NEHLEVLK HLL NRSQQ  Q+QQQ++ L
Subjt:  NCFKISDSGLHEVVEKNPLLTKIFCIYTPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPL

Query:  LYHEYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECN
         +HE+I+ SKLL ++Y  MIDV++CPKC +IGRVYDCSRERCKIKQE+K  A+CRGCS CV RCEECGGCVD DE EEAVCA  LC+SCWLQLPKCN CN
Subjt:  LYHEYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECN

Query:  RPYCKRHRDNVTVSSSAAGFVCEVCLE
        RPYC RH  NV  SSSAAGFVCEVC+E
Subjt:  RPYCKRHRDNVTVSSSAAGFVCEVCLE

A0A6J1IEZ1 F-box protein SKIP285.1e-13074.31Show/hide
Query:  MSENQEPPNPAVAAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI
        MSEN++ PN     GSSSP + I AGPPHEALF VLSYLPL ELLSM AVCVSLRDAVE DVLPWLH+VVD PLS RL+D IL RIARKADGRLRTLALI
Subjt:  MSENQEPPNPAVAAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKIFCIYTPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPL
        NCFKISDS LHEVV+ NPLLTK        LYVPGC+SLTP GV+RAV+TLSQHSHNL SLMI GIY I+ NEHLEVLK +LL NRSQQ  Q+QQQ+Q  
Subjt:  NCFKISDSGLHEVVEKNPLLTKIFCIYTPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPL

Query:  LYHEYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECN
        LYH+ I+ SKLL +E   MIDV++CPKC ++GRVYDCSRERCKIKQE+K  A+CRGCS CV RCEECGGCVD DE EEAVC   LC+SCWLQLPKCN CN
Subjt:  LYHEYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECN

Query:  RPYCKRHRDNVTVSSSAAGFVCEVCLE
        +PYC RHR NV  SSSAAGFVCEVC+E
Subjt:  RPYCKRHRDNVTVSSSAAGFVCEVCLE

SwissProt top hitse value%identityAlignment
Q9LK24 F-box protein At3g272901.2e-2732.96Show/hide
Query:  GPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHI-VVDLPLSYRLSDEILRRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKIF
        G  H+A   VL YL L E+L++  VC SLRD+V ++   W  I + D  L YR++DE L ++ R+A G +R L L  C  I+D GL +V+  NP LTK  
Subjt:  GPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHI-VVDLPLSYRLSDEILRRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKIF

Query:  CIYTPQLYVPGCSSLTPGGVVRAVKTL-SQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQ
              L V GC  L+  G+V  ++ L S +   +KSL+  G       +  E+   +LL+    ++  ++++K+   ++        L D+   + D++
Subjt:  CIYTPQLYVPGCSSLTPGGVVRAVKTL-SQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQ

Query:  ICPKCNDIGRVYDCSRERCKIK-QEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSC
        ICP C     V+DC  + C +K Q    ++ CR C +C+ RC ECG C++D E  +  C    C  C
Subjt:  ICPKCNDIGRVYDCSRERCKIK-QEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSC

Q9LU91 F-box protein SKIP142.1e-3533.58Show/hide
Query:  HEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKIFCIYT
        H A+ F L +L   +LLS+S VC SL   V  D L W HI +  PL+ ++++E L  +  +A G ++ L +++C +I+D  L  VV +N  + KI     
Subjt:  HEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKIFCIYT

Query:  PQLYVPGCSSLTPGGVVRAVKTL-SQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQICPK
            VPGC+ +T  G++  ++ L S     +K L + G++ +  + + E++    + N+ +Q  QK     P  YH        +S +    +D+++CPK
Subjt:  PQLYVPGCSSLTPGGVVRAVKTL-SQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQICPK

Query:  CNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPK
        C +   VYDC  E CK K  +K   +CR CSLC+ RC  CG C+ D E EE  C   LC+ C    PK
Subjt:  CNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPK

Q9ZU90 F-box protein SKIP281.2e-5138.44Show/hide
Query:  HEALFFVLSYL-PLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKIFCIY
        HE L  VL YL  L ELLSM  V  SLRDA+  +   W  +V++ PLS RL+D+IL   + K+ G+L+TL L  C  +++ GL  VV+ NPL+TKI    
Subjt:  HEALFFVLSYL-PLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKIFCIY

Query:  TPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQICPK
             VPGCS LTP G++  V++LS+++H L++L I+G+      +HL  L  +L                                  +  ID+++CPK
Subjt:  TPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQICPK

Query:  CNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCV--DDDEKEEAVCAR--TLCSSCWLQLPKCNECNRPYC-----KRHRDNVTVSSSAA
        C+++  +  CSRE C  KQ +     CRGC LC+ RC EC  C+   D E +EA C     LC  CWL LPKC  CN+PYC     +RH   +T ++S  
Subjt:  CNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCV--DDDEKEEAVCAR--TLCSSCWLQLPKCNECNRPYC-----KRHRDNVTVSSSAA

Query:  GFVCEVC
         F CE C
Subjt:  GFVCEVC

Arabidopsis top hitse value%identityAlignment
AT2G01620.1 RNI-like superfamily protein8.5e-5338.44Show/hide
Query:  HEALFFVLSYL-PLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKIFCIY
        HE L  VL YL  L ELLSM  V  SLRDA+  +   W  +V++ PLS RL+D+IL   + K+ G+L+TL L  C  +++ GL  VV+ NPL+TKI    
Subjt:  HEALFFVLSYL-PLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKIFCIY

Query:  TPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQICPK
             VPGCS LTP G++  V++LS+++H L++L I+G+      +HL  L  +L                                  +  ID+++CPK
Subjt:  TPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQICPK

Query:  CNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCV--DDDEKEEAVCAR--TLCSSCWLQLPKCNECNRPYC-----KRHRDNVTVSSSAA
        C+++  +  CSRE C  KQ +     CRGC LC+ RC EC  C+   D E +EA C     LC  CWL LPKC  CN+PYC     +RH   +T ++S  
Subjt:  CNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCV--DDDEKEEAVCAR--TLCSSCWLQLPKCNECNRPYC-----KRHRDNVTVSSSAA

Query:  GFVCEVC
         F CE C
Subjt:  GFVCEVC

AT3G26000.1 Ribonuclease inhibitor1.5e-3633.58Show/hide
Query:  HEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKIFCIYT
        H A+ F L +L   +LLS+S VC SL   V  D L W HI +  PL+ ++++E L  +  +A G ++ L +++C +I+D  L  VV +N  + KI     
Subjt:  HEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKIFCIYT

Query:  PQLYVPGCSSLTPGGVVRAVKTL-SQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQICPK
            VPGC+ +T  G++  ++ L S     +K L + G++ +  + + E++    + N+ +Q  QK     P  YH        +S +    +D+++CPK
Subjt:  PQLYVPGCSSLTPGGVVRAVKTL-SQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQICPK

Query:  CNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPK
        C +   VYDC  E CK K  +K   +CR CSLC+ RC  CG C+ D E EE  C   LC+ C    PK
Subjt:  CNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPK

AT3G27290.1 RNI-like superfamily protein8.6e-2932.96Show/hide
Query:  GPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHI-VVDLPLSYRLSDEILRRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKIF
        G  H+A   VL YL L E+L++  VC SLRD+V ++   W  I + D  L YR++DE L ++ R+A G +R L L  C  I+D GL +V+  NP LTK  
Subjt:  GPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHI-VVDLPLSYRLSDEILRRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKIF

Query:  CIYTPQLYVPGCSSLTPGGVVRAVKTL-SQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQ
              L V GC  L+  G+V  ++ L S +   +KSL+  G       +  E+   +LL+    ++  ++++K+   ++        L D+   + D++
Subjt:  CIYTPQLYVPGCSSLTPGGVVRAVKTL-SQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQ

Query:  ICPKCNDIGRVYDCSRERCKIK-QEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSC
        ICP C     V+DC  + C +K Q    ++ CR C +C+ RC ECG C++D E  +  C    C  C
Subjt:  ICPKCNDIGRVYDCSRERCKIK-QEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGAACACTGGACCAGAATCATCCTCGCCCTTCAATTTTCCTCCTCCATTCGAAGCTAAGGAATTAGATATTTTCGTCAAAGCGGCAGCAGAGAAGGAAGACGAAGAACT
CATCGACATGTCTGAGAATCAGGAACCCCCAAATCCGGCGGTCGCCGCCGGCAGTTCGTCTCCCGACCTTCGAATCGAAGCAGGGCCACCGCACGAGGCGTTATTTTTTG
TACTGAGTTATCTTCCTCTCTCTGAGCTTCTTTCCATGAGCGCAGTCTGCGTATCGCTCAGAGACGCAGTGGAACGCGATGTGTTGCCGTGGCTTCACATCGTCGTCGAT
CTGCCCTTGAGCTACCGGCTGTCCGATGAAATTCTTCGGAGAATCGCCCGGAAGGCCGATGGTCGCCTCAGAACCTTGGCTTTGATCAACTGTTTCAAGATTTCAGATTC
TGGACTTCACGAAGTTGTTGAGAAGAATCCTCTTCTCACCAAGATTTTCTGTATCTATACTCCTCAGCTTTACGTACCTGGATGCTCGAGTTTGACCCCTGGGGGAGTGG
TTAGAGCAGTGAAGACTCTATCTCAACATTCTCACAACCTGAAGAGCCTAATGATTCATGGCATTTACAAAATAGATAATAATGAACACCTTGAAGTCCTCAAATGCCAT
CTTCTCATCAACCGATCACAACAGCTACCGCAGAAGCAGCAGCAAAAACAACCTCTCCTGTACCATGAGTACATTGACCGATCGAAGTTATTGAGTGACGAATACCAGCC
AATGATTGATGTACAAATCTGCCCAAAATGCAATGATATAGGGAGAGTTTATGATTGCTCAAGGGAGAGGTGCAAGATAAAGCAAGAGGAGAAATTGCAGGCAGACTGCC
GGGGTTGCAGCCTTTGCGTTACAAGGTGTGAAGAATGTGGGGGATGCGTGGATGATGATGAAAAAGAAGAGGCTGTATGTGCACGTACCTTGTGTTCAAGTTGCTGGCTT
CAACTTCCCAAATGCAACGAATGTAATAGGCCATATTGCAAGCGACATCGTGATAATGTAACTGTAAGTAGCTCTGCAGCTGGTTTTGTTTGTGAAGTTTGTCTAGAAGG
GTGTATTTGGTGTTGA
mRNA sequenceShow/hide mRNA sequence
GTGAACACTGGACCAGAATCATCCTCGCCCTTCAATTTTCCTCCTCCATTCGAAGCTAAGGAATTAGATATTTTCGTCAAAGCGGCAGCAGAGAAGGAAGACGAAGAACT
CATCGACATGTCTGAGAATCAGGAACCCCCAAATCCGGCGGTCGCCGCCGGCAGTTCGTCTCCCGACCTTCGAATCGAAGCAGGGCCACCGCACGAGGCGTTATTTTTTG
TACTGAGTTATCTTCCTCTCTCTGAGCTTCTTTCCATGAGCGCAGTCTGCGTATCGCTCAGAGACGCAGTGGAACGCGATGTGTTGCCGTGGCTTCACATCGTCGTCGAT
CTGCCCTTGAGCTACCGGCTGTCCGATGAAATTCTTCGGAGAATCGCCCGGAAGGCCGATGGTCGCCTCAGAACCTTGGCTTTGATCAACTGTTTCAAGATTTCAGATTC
TGGACTTCACGAAGTTGTTGAGAAGAATCCTCTTCTCACCAAGATTTTCTGTATCTATACTCCTCAGCTTTACGTACCTGGATGCTCGAGTTTGACCCCTGGGGGAGTGG
TTAGAGCAGTGAAGACTCTATCTCAACATTCTCACAACCTGAAGAGCCTAATGATTCATGGCATTTACAAAATAGATAATAATGAACACCTTGAAGTCCTCAAATGCCAT
CTTCTCATCAACCGATCACAACAGCTACCGCAGAAGCAGCAGCAAAAACAACCTCTCCTGTACCATGAGTACATTGACCGATCGAAGTTATTGAGTGACGAATACCAGCC
AATGATTGATGTACAAATCTGCCCAAAATGCAATGATATAGGGAGAGTTTATGATTGCTCAAGGGAGAGGTGCAAGATAAAGCAAGAGGAGAAATTGCAGGCAGACTGCC
GGGGTTGCAGCCTTTGCGTTACAAGGTGTGAAGAATGTGGGGGATGCGTGGATGATGATGAAAAAGAAGAGGCTGTATGTGCACGTACCTTGTGTTCAAGTTGCTGGCTT
CAACTTCCCAAATGCAACGAATGTAATAGGCCATATTGCAAGCGACATCGTGATAATGTAACTGTAAGTAGCTCTGCAGCTGGTTTTGTTTGTGAAGTTTGTCTAGAAGG
GTGTATTTGGTGTTGA
Protein sequenceShow/hide protein sequence
VNTGPESSSPFNFPPPFEAKELDIFVKAAAEKEDEELIDMSENQEPPNPAVAAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVD
LPLSYRLSDEILRRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKIFCIYTPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCH
LLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWL
QLPKCNECNRPYCKRHRDNVTVSSSAAGFVCEVCLEGCIWC