CuGenDBv2

Gene ID	Spg008768
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	ATP synthase subunit d, mitochondrial
Genome location	scaffold10:37444375..37444891
RNA-Seq Expression	Spg008768
Synteny	Spg008768
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0000274 - mitochondrial proton-transporting ATP synthase, stator stalk (cellular component) GO:0015078 - proton transmembrane transporter activity (molecular function)
InterPro domains	IPR008689 - ATP synthase, F0 complex, subunit D, mitochondrial IPR036228 - ATP synthase, F0 complex, subunit D superfamily, mitochondrial

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004142418.1 ATP synthase subunit d, mitochondrial [Cucumis sativus]

7.6e-44

68.1

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Query:  MSGTVKKVADVASKASKNIDWDGMAKLLVSNQARKEFSTLHQAFEEVISTLQTKL---------------------------MTGIEIPKFVDTVTLQYK
        MSGT+KKV DVA KASKNIDWDGMAKLLVS++ARKEFS+L +AFEEV S LQTK                              GIEIPKFVDTVT QYK
Subjt:  MSGTVKKVADVASKASKNIDWDGMAKLLVSNQARKEFSTLHQAFEEVISTLQTKL---------------------------MTGIEIPKFVDTVTLQYK

Query:  PKFDALHVELKEAEVKSLKESERLEKEIVEVQEMNEKI-GMTADEYFEKHAELRNKLDDDIRN
        PKFDAL VELKEAE KSLKESERLEKEI EVQEM +KI  MTADEYFEKH ELR K DD+IRN
Subjt:  PKFDALHVELKEAEVKSLKESERLEKEIVEVQEMNEKI-GMTADEYFEKHAELRNKLDDDIRN

XP_022139222.1 ATP synthase subunit d, mitochondrial [Momordica charantia]

1.5e-44

68.1

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Query:  MSGTVKKVADVASKASKNIDWDGMAKLLVSNQARKEFSTLHQAFEEVISTLQTKL---------------------------MTGIEIPKFVDTVTLQYK
        MSGTVKKVADVA KASKNIDWDGMAKLLVS++ARKEF+TL +AF+EV STLQTK                               IE+PKFVDTVT QYK
Subjt:  MSGTVKKVADVASKASKNIDWDGMAKLLVSNQARKEFSTLHQAFEEVISTLQTKL---------------------------MTGIEIPKFVDTVTLQYK

Query:  PKFDALHVELKEAEVKSLKESERLEKEIVEVQEMNEKIG-MTADEYFEKHAELRNKLDDDIRN
        PKFDAL VELKEAE KSLKESERLEKE+VEVQEM +KI  MTADEYFEKH ELR K DD+IRN
Subjt:  PKFDALHVELKEAEVKSLKESERLEKEIVEVQEMNEKIG-MTADEYFEKHAELRNKLDDDIRN

XP_022945159.1 ATP synthase subunit d, mitochondrial [Cucurbita moschata]

1.3e-43

67.48

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Query:  MSGTVKKVADVASKASKNIDWDGMAKLLVSNQARKEFSTLHQAFEEVISTLQTKL---------------------------MTGIEIPKFVDTVTLQYK
        MSGTVKKV DVA KASKNIDWDGMAKLLVS++ARKEFS+L +AFEEV S LQTK                               IE+PKFVDTVT QYK
Subjt:  MSGTVKKVADVASKASKNIDWDGMAKLLVSNQARKEFSTLHQAFEEVISTLQTKL---------------------------MTGIEIPKFVDTVTLQYK

Query:  PKFDALHVELKEAEVKSLKESERLEKEIVEVQEMNEKIG-MTADEYFEKHAELRNKLDDDIRN
        PKFD+L VELKEAEVKSLKESERLEKEIVEVQE+ +KI  MTADEYFEKH ELR K DD+IRN
Subjt:  PKFDALHVELKEAEVKSLKESERLEKEIVEVQEMNEKIG-MTADEYFEKHAELRNKLDDDIRN

XP_022966719.1 ATP synthase subunit d, mitochondrial [Cucurbita maxima]

4.5e-44

68.1

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Query:  MSGTVKKVADVASKASKNIDWDGMAKLLVSNQARKEFSTLHQAFEEVISTLQTKL---------------------------MTGIEIPKFVDTVTLQYK
        MSGTVKKV DVA KASKNIDWDGMAKLLVS++ARKEFS+L +AFEEV S+LQTK                               IE+PKFVDTVT QYK
Subjt:  MSGTVKKVADVASKASKNIDWDGMAKLLVSNQARKEFSTLHQAFEEVISTLQTKL---------------------------MTGIEIPKFVDTVTLQYK

Query:  PKFDALHVELKEAEVKSLKESERLEKEIVEVQEMNEKIG-MTADEYFEKHAELRNKLDDDIRN
        PKFDAL VELKEAEVKSLKESERLEKEIVEVQE+ +KI  MTADEYFEKH ELR K DD+IRN
Subjt:  PKFDALHVELKEAEVKSLKESERLEKEIVEVQEMNEKIG-MTADEYFEKHAELRNKLDDDIRN

XP_023541261.1 ATP synthase subunit d, mitochondrial [Cucurbita pepo subsp. pepo]

2.0e-44

68.71

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Query:  MSGTVKKVADVASKASKNIDWDGMAKLLVSNQARKEFSTLHQAFEEVISTLQTKL---------------------------MTGIEIPKFVDTVTLQYK
        MSGTVKKV DVA KASKNIDWDGMAKLLVS++ARKEFS+L +AFEEV S+LQTK                               IE+PKFVDTVT QYK
Subjt:  MSGTVKKVADVASKASKNIDWDGMAKLLVSNQARKEFSTLHQAFEEVISTLQTKL---------------------------MTGIEIPKFVDTVTLQYK

Query:  PKFDALHVELKEAEVKSLKESERLEKEIVEVQEMNEKIG-MTADEYFEKHAELRNKLDDDIRN
        PKFDAL VELKEAEVKSLKESERLEKEIVEVQEM +KI  MTADEYFEKH ELR K DD+IRN
Subjt:  PKFDALHVELKEAEVKSLKESERLEKEIVEVQEMNEKIG-MTADEYFEKHAELRNKLDDDIRN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KRL4 ATP synthase subunit d, mitochondrial

3.7e-44

68.1

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Query:  MSGTVKKVADVASKASKNIDWDGMAKLLVSNQARKEFSTLHQAFEEVISTLQTKL---------------------------MTGIEIPKFVDTVTLQYK
        MSGT+KKV DVA KASKNIDWDGMAKLLVS++ARKEFS+L +AFEEV S LQTK                              GIEIPKFVDTVT QYK
Subjt:  MSGTVKKVADVASKASKNIDWDGMAKLLVSNQARKEFSTLHQAFEEVISTLQTKL---------------------------MTGIEIPKFVDTVTLQYK

Query:  PKFDALHVELKEAEVKSLKESERLEKEIVEVQEMNEKI-GMTADEYFEKHAELRNKLDDDIRN
        PKFDAL VELKEAE KSLKESERLEKEI EVQEM +KI  MTADEYFEKH ELR K DD+IRN
Subjt:  PKFDALHVELKEAEVKSLKESERLEKEIVEVQEMNEKI-GMTADEYFEKHAELRNKLDDDIRN

A0A5D3CDC0 ATP synthase subunit d, mitochondrial

5.3e-43

67.48

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Query:  MSGTVKKVADVASKASKNIDWDGMAKLLVSNQARKEFSTLHQAFEEVISTLQTKL---------------------------MTGIEIPKFVDTVTLQYK
        MSGTVKKV DVA KASKNIDWDGMAKLLVS++ARKEFS+L +AFEEV S LQTK                               IEIPKFVDTVT QYK
Subjt:  MSGTVKKVADVASKASKNIDWDGMAKLLVSNQARKEFSTLHQAFEEVISTLQTKL---------------------------MTGIEIPKFVDTVTLQYK

Query:  PKFDALHVELKEAEVKSLKESERLEKEIVEVQEMNEKI-GMTADEYFEKHAELRNKLDDDIRN
        PKFDAL VELKEAE KSLKESERLEKEI EV+EM +KI  MTADEYFEKH ELR K DD+IRN
Subjt:  PKFDALHVELKEAEVKSLKESERLEKEIVEVQEMNEKI-GMTADEYFEKHAELRNKLDDDIRN

A0A6J1CDD8 ATP synthase subunit d, mitochondrial

7.5e-45

68.1

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Query:  MSGTVKKVADVASKASKNIDWDGMAKLLVSNQARKEFSTLHQAFEEVISTLQTKL---------------------------MTGIEIPKFVDTVTLQYK
        MSGTVKKVADVA KASKNIDWDGMAKLLVS++ARKEF+TL +AF+EV STLQTK                               IE+PKFVDTVT QYK
Subjt:  MSGTVKKVADVASKASKNIDWDGMAKLLVSNQARKEFSTLHQAFEEVISTLQTKL---------------------------MTGIEIPKFVDTVTLQYK

Query:  PKFDALHVELKEAEVKSLKESERLEKEIVEVQEMNEKIG-MTADEYFEKHAELRNKLDDDIRN
        PKFDAL VELKEAE KSLKESERLEKE+VEVQEM +KI  MTADEYFEKH ELR K DD+IRN
Subjt:  PKFDALHVELKEAEVKSLKESERLEKEIVEVQEMNEKIG-MTADEYFEKHAELRNKLDDDIRN

A0A6J1G072 ATP synthase subunit d, mitochondrial

6.3e-44

67.48

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Query:  MSGTVKKVADVASKASKNIDWDGMAKLLVSNQARKEFSTLHQAFEEVISTLQTKL---------------------------MTGIEIPKFVDTVTLQYK
        MSGTVKKV DVA KASKNIDWDGMAKLLVS++ARKEFS+L +AFEEV S LQTK                               IE+PKFVDTVT QYK
Subjt:  MSGTVKKVADVASKASKNIDWDGMAKLLVSNQARKEFSTLHQAFEEVISTLQTKL---------------------------MTGIEIPKFVDTVTLQYK

Query:  PKFDALHVELKEAEVKSLKESERLEKEIVEVQEMNEKIG-MTADEYFEKHAELRNKLDDDIRN
        PKFD+L VELKEAEVKSLKESERLEKEIVEVQE+ +KI  MTADEYFEKH ELR K DD+IRN
Subjt:  PKFDALHVELKEAEVKSLKESERLEKEIVEVQEMNEKIG-MTADEYFEKHAELRNKLDDDIRN

A0A6J1HUL8 ATP synthase subunit d, mitochondrial

2.2e-44

68.1

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Query:  MSGTVKKVADVASKASKNIDWDGMAKLLVSNQARKEFSTLHQAFEEVISTLQTKL---------------------------MTGIEIPKFVDTVTLQYK
        MSGTVKKV DVA KASKNIDWDGMAKLLVS++ARKEFS+L +AFEEV S+LQTK                               IE+PKFVDTVT QYK
Subjt:  MSGTVKKVADVASKASKNIDWDGMAKLLVSNQARKEFSTLHQAFEEVISTLQTKL---------------------------MTGIEIPKFVDTVTLQYK

Query:  PKFDALHVELKEAEVKSLKESERLEKEIVEVQEMNEKIG-MTADEYFEKHAELRNKLDDDIRN
        PKFDAL VELKEAEVKSLKESERLEKEIVEVQE+ +KI  MTADEYFEKH ELR K DD+IRN
Subjt:  PKFDALHVELKEAEVKSLKESERLEKEIVEVQEMNEKIG-MTADEYFEKHAELRNKLDDDIRN

SwissProt top hits

e value

%identity

Alignment

Q9FT52 ATP synthase subunit d, mitochondrial

2.0e-39

58.28

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Query:  MSGTVKKVADVASKASKNIDWDGMAKLLVSNQARKEFSTLHQAFEEVISTLQTKL---------------------------MTGIEIPKFVDTVTLQYK
        MSG  KK+ADVA KAS+ IDWDGMAK+LV+++AR+EFS L +AF+EV + LQTK                               IEIPK+VD VT +YK
Subjt:  MSGTVKKVADVASKASKNIDWDGMAKLLVSNQARKEFSTLHQAFEEVISTLQTKL---------------------------MTGIEIPKFVDTVTLQYK

Query:  PKFDALHVELKEAEVKSLKESERLEKEIVEVQEMNEKIG-MTADEYFEKHAELRNKLDDDIRN
        PKFDAL VELKEAE KSLKESERLEKEI +VQE+++K+  MTADEYFEKH EL+ K DD+IRN
Subjt:  PKFDALHVELKEAEVKSLKESERLEKEIVEVQEMNEKIG-MTADEYFEKHAELRNKLDDDIRN

Arabidopsis top hits

e value

%identity

Alignment

AT3G52300.1 ATP synthase D chain, mitochondrial

1.4e-40

58.28

Show/hide

Query:  MSGTVKKVADVASKASKNIDWDGMAKLLVSNQARKEFSTLHQAFEEVISTLQTKL---------------------------MTGIEIPKFVDTVTLQYK
        MSG  KK+ADVA KAS+ IDWDGMAK+LV+++AR+EFS L +AF+EV + LQTK                               IEIPK+VD VT +YK
Subjt:  MSGTVKKVADVASKASKNIDWDGMAKLLVSNQARKEFSTLHQAFEEVISTLQTKL---------------------------MTGIEIPKFVDTVTLQYK

Query:  PKFDALHVELKEAEVKSLKESERLEKEIVEVQEMNEKIG-MTADEYFEKHAELRNKLDDDIRN
        PKFDAL VELKEAE KSLKESERLEKEI +VQE+++K+  MTADEYFEKH EL+ K DD+IRN
Subjt:  PKFDALHVELKEAEVKSLKESERLEKEIVEVQEMNEKIG-MTADEYFEKHAELRNKLDDDIRN

AT3G52300.2 ATP synthase D chain, mitochondrial

5.3e-19

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Query:  MSGTVKKVADVASKASKNIDWDGMAKLLVSNQARKEFSTLHQAFEEVISTLQTKL---------------------------MTGIEIPKFVDTVTLQYK
        MSG  KK+ADVA KAS+ IDWDGMAK+LV+++AR+EFS L +AF+EV + LQTK                               IEIPK+VD VT +YK
Subjt:  MSGTVKKVADVASKASKNIDWDGMAKLLVSNQARKEFSTLHQAFEEVISTLQTKL---------------------------MTGIEIPKFVDTVTLQYK

Query:  PKFDAL
        PKFDAL
Subjt:  PKFDAL

Sequences

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CDS sequence

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ATGAGCGGCACCGTTAAGAAAGTCGCCGATGTTGCCTCCAAAGCATCCAAGAACATCGATTGGGATGGCATGGCAAAGCTTTTGGTCTCCAATCAGGCTCGCAAGGAGTT
CTCAACACTTCACCAAGCCTTCGAGGAGGTTATCTCAACCCTCCAGACCAAGCTTATGACAGGCATTGAGATCCCCAAATTTGTAGACACAGTGACTCTGCAGTACAAAC
CTAAATTCGATGCGTTGCATGTAGAATTGAAGGAAGCTGAAGTGAAATCCCTAAAGGAGTCTGAGCGGTTGGAAAAGGAGATTGTTGAAGTTCAAGAAATGAACGAAAAG
ATCGGCATGACTGCTGATGAATACTTCGAGAAGCATGCTGAGCTGAGGAATAAATTGGATGACGACATCCGAAACAGACTAGTTGGGGCTATTGATTGCAAATAG

mRNA sequence

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Protein sequence

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MSGTVKKVADVASKASKNIDWDGMAKLLVSNQARKEFSTLHQAFEEVISTLQTKLMTGIEIPKFVDTVTLQYKPKFDALHVELKEAEVKSLKESERLEKEIVEVQEMNEK
IGMTADEYFEKHAELRNKLDDDIRNRLVGAIDCK

Spg008768 (gene) of Sponge gourd (cylindrica) v1 genome