CuGenDBv2

Gene ID	Spg008797
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Coiled-coil domain-containing protein 86
Genome location	scaffold10:32490439..32492457
RNA-Seq Expression	Spg008797
Synteny	Spg008797
Gene Ontology terms	GO:0005730 - nucleolus (cellular component)
InterPro domains	IPR005579 - Cgr1-like IPR026570 - Coiled-coil domain-containing protein 86

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7016626.1 hypothetical protein SDJN02_21736, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.0e-76

90.71

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQVS
        MACTIDFRRLDEGFGGKTYKRKREEA++SLN   SENADASMD+D+S  PP KRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHR SAM VS
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQVS

Query:  RKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKLV
        RKGTTFEERE+QKMIKAA+RERKEELKEQIR NKVEKRKK+EEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLK+V
Subjt:  RKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKLV

XP_008465532.1 PREDICTED: protein PXR1 [Cucumis melo]

1.4e-77

90.76

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSF-PPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQV
        MACTIDFRRLDEGFGGKTYKRKREEA+ SL   +SENAD +M+IDDS  PPP+KRSAIPSSENPDKPT+GNPTYDGVIAGKVSGRKWKQPRKHR SAMQV
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSF-PPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQV

Query:  SRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKLV
        SRKGTTFEERE+QKMIKAAF+ERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLK+V
Subjt:  SRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKLV

XP_022141739.1 protein PXR1 [Momordica charantia]

2.1e-81

95.14

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRK--REEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ
        MACTIDFR LDEGFGGKTYKRK  REEAQNSLN  DSENADASM+ID+SFPPP+KRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ
Subjt:  MACTIDFRRLDEGFGGKTYKRK--REEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ

Query:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKLV
        VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLK+V
Subjt:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKLV

XP_022939634.1 protein PXR1 [Cucurbita moschata]

2.0e-76

90.71

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQVS
        MACTIDFRRLDEGFGGKTYKRKREEA++SLN   SENADASMD+D+S  PP KRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHR SAM VS
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQVS

Query:  RKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKLV
        RKGTTFEERE+QKMIKAA+RERKEELKEQIR NKVEKRKK+EEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLK+V
Subjt:  RKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKLV

XP_038874831.1 protein PXR1 [Benincasa hispida]

8.9e-80

92.9

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQVS
        MACTIDFRRLDEGFGGKTYKRKREEA+ SLN  +SENAD SM+IDDS PPPSKRSAIPSSENPDKPTF NPTYDGVIAGKVSGRKWKQPRKHR SAMQVS
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQVS

Query:  RKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKLV
        RKGTTFEERE+QK IKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLK+V
Subjt:  RKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKLV

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CP36 Coiled-coil domain-containing protein 86

6.9e-78

90.76

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSF-PPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQV
        MACTIDFRRLDEGFGGKTYKRKREEA+ SL   +SENAD +M+IDDS  PPP+KRSAIPSSENPDKPT+GNPTYDGVIAGKVSGRKWKQPRKHR SAMQV
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSF-PPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQV

Query:  SRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKLV
        SRKGTTFEERE+QKMIKAAF+ERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLK+V
Subjt:  SRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKLV

A0A5D3BKZ5 Coiled-coil domain-containing protein 86

6.9e-78

90.76

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSF-PPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQV
        MACTIDFRRLDEGFGGKTYKRKREEA+ SL   +SENAD +M+IDDS  PPP+KRSAIPSSENPDKPT+GNPTYDGVIAGKVSGRKWKQPRKHR SAMQV
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSF-PPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQV

Query:  SRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKLV
        SRKGTTFEERE+QKMIKAAF+ERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLK+V
Subjt:  SRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKLV

A0A6J1CIY7 Coiled-coil domain-containing protein 86

1.0e-81

95.14

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRK--REEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ
        MACTIDFR LDEGFGGKTYKRK  REEAQNSLN  DSENADASM+ID+SFPPP+KRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ
Subjt:  MACTIDFRRLDEGFGGKTYKRK--REEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ

Query:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKLV
        VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLK+V
Subjt:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKLV

A0A6J1FHS9 Coiled-coil domain-containing protein 86

9.9e-77

90.71

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQVS
        MACTIDFRRLDEGFGGKTYKRKREEA++SLN   SENADASMD+D+S  PP KRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHR SAM VS
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQVS

Query:  RKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKLV
        RKGTTFEERE+QKMIKAA+RERKEELKEQIR NKVEKRKK+EEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLK+V
Subjt:  RKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKLV

A0A6J1JYC3 Coiled-coil domain-containing protein 86

9.9e-77

90.71

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQVS
        MACTIDFRRLDEGFGGKTYKRKREEA++SLN   SENADASMD+D+S  PP KRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHR SAM VS
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQVS

Query:  RKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKLV
        RKGTTFEERE+QKMIKAA+RERKEELKEQIR NKVEKRKK+EEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLK+V
Subjt:  RKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKLV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G31410.1 unknown protein

2.7e-50

64.71

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKP---TFGNPTYDGVIAGKVSGRKWKQPRKHRASAM
        MACT+DFR LDEGFGGKTYKRKRE  + +   A ++  +ASMDID + PP +KRSA+ SSENPDKP       PTYDGVIAGKVSGR WKQPR HR+S  
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKP---TFGNPTYDGVIAGKVSGRKWKQPRKHRASAM

Query:  QVSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKS-KQKKLLKLV
         V  +    EE ++Q+ IK A++ER  ELKE+IR NKVEKRKK+EEREK+KKEN+LR+GTKLQKITNPKTLKKI+ S KQ+K LK +
Subjt:  QVSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKS-KQKKLLKLV

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGTGCACCATCGACTTTCGCCGCCTGGACGAGGGTTTTGGGGGAAAGACCTACAAGCGAAAGCGCGAAGAAGCTCAGAACAGCCTCAACAACGCCGACTCTGAAAA
TGCCGACGCCTCCATGGACATCGACGACTCGTTTCCACCGCCGTCCAAGCGATCCGCGATTCCTTCGTCGGAAAATCCTGACAAACCGACCTTTGGCAATCCTACCTACG
ACGGCGTTATCGCCGGAAAGGTCTCCGGACGGAAGTGGAAACAGCCGCGGAAGCACAGGGCGTCCGCTATGCAGGTGAGCAGGAAAGGTACCACGTTTGAGGAGAGAGAG
AAGCAGAAGATGATTAAGGCGGCGTTCAGGGAACGGAAGGAGGAATTGAAGGAGCAGATTAGGTTAAACAAGGTGGAGAAAAGGAAGAAGAGAGAGGAGAGAGAGAAGAA
GAAGAAGGAGAACATTTTGAGATCTGGAACTAAGCTACAGAAGATTACCAATCCCAAGACATTGAAGAAGATTGCTAAGTCCAAGCAGAAGAAGCTCCTCAAGCTTGTTG
CGAGCGTTCTCAAAATGATATTGCTCAATATTACTGTCAGAATTGCGAACTTCAATTTTCGTGCAGCTATGGGCGTTTCATGGGTTGGTGTGGGCAATGGATATAAATAC
GACATTGGGAAGAAGAGGGAGAGAGAGGCTGAGATTCAAGTTTCTTCTTCTTCTTCTTCTAGGACAGTTGATCCTAGAAGAACTGGTTTAGGTATTTAA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQVSRKGTTFEERE
KQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKLVASVLKMILLNITVRIANFNFRAAMGVSWVGVGNGYKY
DIGKKREREAEIQVSSSSSSRTVDPRRTGLGI

Spg008797 (gene) of Sponge gourd (cylindrica) v1 genome