; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg008804 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008804
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptioncDNA clone:J033087L04, full insert sequence
Genome locationscaffold10:30829584..30834262
RNA-Seq ExpressionSpg008804
SyntenySpg008804
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACF79267.1 unknown [Zea mays]3.1e-0940.31Show/hide
Query:  LPGSERRAVGDPVLLSAAD-GSRVRRNPAVRGVVRGGPVRGIGPKTRDENIQILQLVLLRDGGFDAGGGDGAGVRAGQHRVGMGIRDSDHRHVPVDNHLH
        +PG    A G  V + A + G R R  P  RG VRGGPVR +        + +LQLVLL      A G  G GVRAGQ  +G+G R +   H  +   L 
Subjt:  LPGSERRAVGDPVLLSAAD-GSRVRRNPAVRGVVRGGPVRGIGPKTRDENIQILQLVLLRDGGFDAGGGDGAGVRAGQHRVGMGIRDSDHRHVPVDNHLH

Query:  CRVPDLQALGPVGQPVYPAAASVRCGLQE
         RVPD+   G  G+PV+ A A  R   QE
Subjt:  CRVPDLQALGPVGQPVYPAAASVRCGLQE

BAS70333.1 Os01g0142800, partial [Oryza sativa Japonica Group]4.2e-0639.58Show/hide
Query:  GAGAEAAAVQGRGSLPGSERRAV-------GDPVLLSAADGSRVRRNPAVRGVVRGGPVRGIGPKTRDENIQILQLVLLRDGGFDAGGGDGAGVRAGQHR
        G G     V G G+  G  RR+V       G  VL +  D +  RR+ AVR VV  GPVR        E  Q+LQLVLL      AGG  GAGVRA   R
Subjt:  GAGAEAAAVQGRGSLPGSERRAV-------GDPVLLSAADGSRVRRNPAVRGVVRGGPVRGIGPKTRDENIQILQLVLLRDGGFDAGGGDGAGVRAGQHR

Query:  VGMGIRDSDHRHVPVDNHLHCRVPDLQALGPVGQPVYPAAASVR
        VG+G+R    RH      L  R   +QA    GQP     A  R
Subjt:  VGMGIRDSDHRHVPVDNHLHCRVPDLQALGPVGQPVYPAAASVR

KAG2627527.1 hypothetical protein PVAP13_3KG127701, partial [Panicum virgatum]2.1e-1343.28Show/hide
Query:  GRGSLPGSERRAVGDPVLLSAADGSRVRRNPAVRGVVRGGPVRGIGPKTRDENIQILQLVLLRDGGFDAGGGDGAGVRAGQHRVGMGIRDSDHRHVPVDN
        G   +P   RRA    V ++A   +R RR+PA+RG VR  PVR   P+ R E +++LQ +LL+ G   A G    GV  G+  VGMG+RD  HRHVP+  
Subjt:  GRGSLPGSERRAVGDPVLLSAADGSRVRRNPAVRGVVRGGPVRGIGPKTRDENIQILQLVLLRDGGFDAGGGDGAGVRAGQHRVGMGIRDSDHRHVPVDN

Query:  HLHCRVPDLQALGPVGQPVYPAAASVRCGLQEEE
         +  RVP L+     G+P+  AAA  R  LQEEE
Subjt:  HLHCRVPDLQALGPVGQPVYPAAASVRCGLQEEE

PKU75791.1 hypothetical protein MA16_Dca026486 [Dendrobium catenatum]9.9e-0843.62Show/hide
Query:  PVLLSAADGSRVRRNPAVRGVVRGGPVRGIGPKTRDENIQILQLVLLRDGGFDAGGGDGAGVRAGQHRVGMGIRDSDHRHVPVDNHLHCRVPDL
        P+LLS  +  R RR+ A+RG +R   +R    K    N++ILQLVL    GFDA GGD   V  GQ  +GM IRDSD  +  + + +  RVPD+
Subjt:  PVLLSAADGSRVRRNPAVRGVVRGGPVRGIGPKTRDENIQILQLVLLRDGGFDAGGGDGAGVRAGQHRVGMGIRDSDHRHVPVDNHLHCRVPDL

XP_015618272.1 uncharacterized protein LOC4325456 isoform X1 [Oryza sativa Japonica Group]4.2e-0639.58Show/hide
Query:  GAGAEAAAVQGRGSLPGSERRAV-------GDPVLLSAADGSRVRRNPAVRGVVRGGPVRGIGPKTRDENIQILQLVLLRDGGFDAGGGDGAGVRAGQHR
        G G     V G G+  G  RR+V       G  VL +  D +  RR+ AVR VV  GPVR        E  Q+LQLVLL      AGG  GAGVRA   R
Subjt:  GAGAEAAAVQGRGSLPGSERRAV-------GDPVLLSAADGSRVRRNPAVRGVVRGGPVRGIGPKTRDENIQILQLVLLRDGGFDAGGGDGAGVRAGQHR

Query:  VGMGIRDSDHRHVPVDNHLHCRVPDLQALGPVGQPVYPAAASVR
        VG+G+R    RH      L  R   +QA    GQP     A  R
Subjt:  VGMGIRDSDHRHVPVDNHLHCRVPDLQALGPVGQPVYPAAASVR

TrEMBL top hitse value%identityAlignment
A0A0P0UYD6 Os01g0142800 protein (Fragment)2.0e-0639.58Show/hide
Query:  GAGAEAAAVQGRGSLPGSERRAV-------GDPVLLSAADGSRVRRNPAVRGVVRGGPVRGIGPKTRDENIQILQLVLLRDGGFDAGGGDGAGVRAGQHR
        G G     V G G+  G  RR+V       G  VL +  D +  RR+ AVR VV  GPVR        E  Q+LQLVLL      AGG  GAGVRA   R
Subjt:  GAGAEAAAVQGRGSLPGSERRAV-------GDPVLLSAADGSRVRRNPAVRGVVRGGPVRGIGPKTRDENIQILQLVLLRDGGFDAGGGDGAGVRAGQHR

Query:  VGMGIRDSDHRHVPVDNHLHCRVPDLQALGPVGQPVYPAAASVR
        VG+G+R    RH      L  R   +QA    GQP     A  R
Subjt:  VGMGIRDSDHRHVPVDNHLHCRVPDLQALGPVGQPVYPAAASVR

A0A2I0WJG1 Uncharacterized protein4.8e-0843.62Show/hide
Query:  PVLLSAADGSRVRRNPAVRGVVRGGPVRGIGPKTRDENIQILQLVLLRDGGFDAGGGDGAGVRAGQHRVGMGIRDSDHRHVPVDNHLHCRVPDL
        P+LLS  +  R RR+ A+RG +R   +R    K    N++ILQLVL    GFDA GGD   V  GQ  +GM IRDSD  +  + + +  RVPD+
Subjt:  PVLLSAADGSRVRRNPAVRGVVRGGPVRGIGPKTRDENIQILQLVLLRDGGFDAGGGDGAGVRAGQHRVGMGIRDSDHRHVPVDNHLHCRVPDL

B4FAX4 Uncharacterized protein1.5e-0940.31Show/hide
Query:  LPGSERRAVGDPVLLSAAD-GSRVRRNPAVRGVVRGGPVRGIGPKTRDENIQILQLVLLRDGGFDAGGGDGAGVRAGQHRVGMGIRDSDHRHVPVDNHLH
        +PG    A G  V + A + G R R  P  RG VRGGPVR +        + +LQLVLL      A G  G GVRAGQ  +G+G R +   H  +   L 
Subjt:  LPGSERRAVGDPVLLSAAD-GSRVRRNPAVRGVVRGGPVRGIGPKTRDENIQILQLVLLRDGGFDAGGGDGAGVRAGQHRVGMGIRDSDHRHVPVDNHLH

Query:  CRVPDLQALGPVGQPVYPAAASVRCGLQE
         RVPD+   G  G+PV+ A A  R   QE
Subjt:  CRVPDLQALGPVGQPVYPAAASVRCGLQE

B7ESU9 cDNA clone:J033087L04, full insert sequence2.0e-0639.58Show/hide
Query:  GAGAEAAAVQGRGSLPGSERRAV-------GDPVLLSAADGSRVRRNPAVRGVVRGGPVRGIGPKTRDENIQILQLVLLRDGGFDAGGGDGAGVRAGQHR
        G G     V G G+  G  RR+V       G  VL +  D +  RR+ AVR VV  GPVR        E  Q+LQLVLL      AGG  GAGVRA   R
Subjt:  GAGAEAAAVQGRGSLPGSERRAV-------GDPVLLSAADGSRVRRNPAVRGVVRGGPVRGIGPKTRDENIQILQLVLLRDGGFDAGGGDGAGVRAGQHR

Query:  VGMGIRDSDHRHVPVDNHLHCRVPDLQALGPVGQPVYPAAASVR
        VG+G+R    RH      L  R   +QA    GQP     A  R
Subjt:  VGMGIRDSDHRHVPVDNHLHCRVPDLQALGPVGQPVYPAAASVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGAGGGGATGATAAGCCTGACGACGTCGGCGGTGGAGCCGGGGCTGAGGCCGCCGCCGTGCAAGGGCGGGGAAGTCTGCCAGGAAGCGAGCGGCGGGCAGTTGG
GGATCCTGTACTTCTCTCTGCTGCTGACGGCTCTCGGGTCCGGCGGAATCCGGCCGTGCGTGGTGTCGTTCGGGGCGGACCAGTTCGAGGAATCGGACCCAAAACAAGGG
ACGAAAACATACAAATACTTCAACTGGTATTACTTCGCGATGGGGGCTTCGATGCTGGTGGCGGTGACGGTGCTGGTGTACGTGCAGGACAACATCGGGTGGGGATGGGG
ATTCGGGATTCCGACCATCGCCATGTTCCTGTCGATAATCACCTTCATTGTCGGGTACCCGATTTACAGGCACTTGGACCCGTCGGGCAGCCCGTTTACCCGGCTGCTGC
AAGTGTGCGTTGCGGCCTTCAGGAAGAGGAAACTCCAGATGCTCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGAGGGGATGATAAGCCTGACGACGTCGGCGGTGGAGCCGGGGCTGAGGCCGCCGCCGTGCAAGGGCGGGGAAGTCTGCCAGGAAGCGAGCGGCGGGCAGTTGG
GGATCCTGTACTTCTCTCTGCTGCTGACGGCTCTCGGGTCCGGCGGAATCCGGCCGTGCGTGGTGTCGTTCGGGGCGGACCAGTTCGAGGAATCGGACCCAAAACAAGGG
ACGAAAACATACAAATACTTCAACTGGTATTACTTCGCGATGGGGGCTTCGATGCTGGTGGCGGTGACGGTGCTGGTGTACGTGCAGGACAACATCGGGTGGGGATGGGG
ATTCGGGATTCCGACCATCGCCATGTTCCTGTCGATAATCACCTTCATTGTCGGGTACCCGATTTACAGGCACTTGGACCCGTCGGGCAGCCCGTTTACCCGGCTGCTGC
AAGTGTGCGTTGCGGCCTTCAGGAAGAGGAAACTCCAGATGCTCTCTGA
Protein sequenceShow/hide protein sequence
MGGGDDKPDDVGGGAGAEAAAVQGRGSLPGSERRAVGDPVLLSAADGSRVRRNPAVRGVVRGGPVRGIGPKTRDENIQILQLVLLRDGGFDAGGGDGAGVRAGQHRVGMG
IRDSDHRHVPVDNHLHCRVPDLQALGPVGQPVYPAAASVRCGLQEEETPDAL