; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg008817 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008817
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold10:36312445..36319107
RNA-Seq ExpressionSpg008817
SyntenySpg008817
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602175.1 hypothetical protein SDJN03_07408, partial [Cucurbita argyrosperma subsp. sororia]5.3e-1656.57Show/hide
Query:  LTSLLFACLLLWFLSLITLPSPVTGNSVDSSPSPPPSKKPHSHLPIHLYIRSSRPMK--LSPLKELLKQQEGIKGSSVESANAPWPVEFVVPSAPPPFR
        + S+LFA LLL  LSL+TLPS  T NS D+SPSPPPS++PH HL  H +IRSSR MK  L   K + K+QE +    V   NAPWP+  V+PS PPPFR
Subjt:  LTSLLFACLLLWFLSLITLPSPVTGNSVDSSPSPPPSKKPHSHLPIHLYIRSSRPMK--LSPLKELLKQQEGIKGSSVESANAPWPVEFVVPSAPPPFR
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGCCCCTCTCACCATCTCCTCGTTTCGTTCTTCTTCTTGGGCGAAAAGTAGCATGGCCAGCGGCGTTGGCCACGCGAGCAGGAAGCTCGAGCCTGGCAATCCATT
GCTGAATCCTTCCCAAAGCCGATCCCTTCTAAAGGAAGAGATGTTCAACTATGGATTCCCCTCGTCAGATGGCATTATTCCTCTCTTTGAGCTTGCCGTCCGCCGTCGAC
GCTCACTCTTCTCCGATCAAAAAGCTACATTACTCACTACCGTCTCTTTACCACAGAAAGACTCTTTCACCACCGCCGCCATGTGGAACGTCCAAAAAGCCGTCGCCACC
GCCACCGCGACCGCCACCCAAGTTTCAATGGCCACCCAATCACGTCGGAAAGTCGCCGCCGCCCCCCTTCTAGATATGTCACATGAGAGAGAAGAGGCATTTGCCCTTAC
ATACAAAGCTGTCCTTGAGTGGTTGACCTCTCTTCTCTTTGCTTGTTTGCTGTTATGGTTTCTCTCTCTGATTACTTTACCCTCGCCGGTCACCGGAAACTCCGTCGACA
GTTCTCCATCACCGCCACCGTCAAAAAAGCCACACAGCCATCTTCCAATTCACCTTTATATACGTTCCTCACGGCCCATGAAGCTGTCACCATTGAAGGAACTTCTTAAG
CAACAAGAAGGAATCAAAGGATCGAGTGTTGAGTCTGCAAATGCTCCGTGGCCAGTTGAGTTTGTTGTTCCATCGGCACCACCTCCTTTTCGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGCCCCTCTCACCATCTCCTCGTTTCGTTCTTCTTCTTGGGCGAAAAGTAGCATGGCCAGCGGCGTTGGCCACGCGAGCAGGAAGCTCGAGCCTGGCAATCCATT
GCTGAATCCTTCCCAAAGCCGATCCCTTCTAAAGGAAGAGATGTTCAACTATGGATTCCCCTCGTCAGATGGCATTATTCCTCTCTTTGAGCTTGCCGTCCGCCGTCGAC
GCTCACTCTTCTCCGATCAAAAAGCTACATTACTCACTACCGTCTCTTTACCACAGAAAGACTCTTTCACCACCGCCGCCATGTGGAACGTCCAAAAAGCCGTCGCCACC
GCCACCGCGACCGCCACCCAAGTTTCAATGGCCACCCAATCACGTCGGAAAGTCGCCGCCGCCCCCCTTCTAGATATGTCACATGAGAGAGAAGAGGCATTTGCCCTTAC
ATACAAAGCTGTCCTTGAGTGGTTGACCTCTCTTCTCTTTGCTTGTTTGCTGTTATGGTTTCTCTCTCTGATTACTTTACCCTCGCCGGTCACCGGAAACTCCGTCGACA
GTTCTCCATCACCGCCACCGTCAAAAAAGCCACACAGCCATCTTCCAATTCACCTTTATATACGTTCCTCACGGCCCATGAAGCTGTCACCATTGAAGGAACTTCTTAAG
CAACAAGAAGGAATCAAAGGATCGAGTGTTGAGTCTGCAAATGCTCCGTGGCCAGTTGAGTTTGTTGTTCCATCGGCACCACCTCCTTTTCGCTAA
Protein sequenceShow/hide protein sequence
MSAPLTISSFRSSSWAKSSMASGVGHASRKLEPGNPLLNPSQSRSLLKEEMFNYGFPSSDGIIPLFELAVRRRRSLFSDQKATLLTTVSLPQKDSFTTAAMWNVQKAVAT
ATATATQVSMATQSRRKVAAAPLLDMSHEREEAFALTYKAVLEWLTSLLFACLLLWFLSLITLPSPVTGNSVDSSPSPPPSKKPHSHLPIHLYIRSSRPMKLSPLKELLK
QQEGIKGSSVESANAPWPVEFVVPSAPPPFR