; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg008839 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008839
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSWIB domain-containing protein
Genome locationscaffold10:31598936..31614601
RNA-Seq ExpressionSpg008839
SyntenySpg008839
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR003121 - SWIB/MDM2 domain
IPR019835 - SWIB domain
IPR036885 - SWIB/MDM2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603170.1 hypothetical protein SDJN03_03779, partial [Cucurbita argyrosperma subsp. sororia]1.7e-4479.69Show/hide
Query:  FKSLMVGSKVSSSRF---KLTLTTYVAKMLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKL
        F +   GSK  SS F   +   T    KMLPQR+KT ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRL CFK VWSYIKTNNLQDPTNKNVVICDEKL
Subjt:  FKSLMVGSKVSSSRF---KLTLTTYVAKMLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKL

Query:  KSILLGKPKVELAELPALIKLHFPKNPK
        KSILLGK K+ELAELPALIKLHFPKNPK
Subjt:  KSILLGKPKVELAELPALIKLHFPKNPK

TKY46953.1 Upstream activation factor subunit spp27 [Spatholobus suberectus]4.9e-4485.45Show/hide
Query:  KLTLTTYVAKMLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPAL
        K  +  + AKMLPQR+K  ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRL CFKCVWSYIKTNNLQDP NKNVV CDEKLKSILLGKP+VELAELPAL
Subjt:  KLTLTTYVAKMLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPAL

Query:  IKLHFPKNPK
        IKLHFPK PK
Subjt:  IKLHFPKNPK

XP_022928748.1 upstream activation factor subunit UAF30 [Cucurbita moschata]1.1e-4393Show/hide
Query:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
        MLPQR+KT ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRL CFK VWSYIKTNNLQDPTNKNVVICDEKLKSILLGK K+ELAELPALIKLHFPKNPK
Subjt:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

XP_022967913.1 protein TRI1 isoform X1 [Cucurbita maxima]2.2e-4475.76Show/hide
Query:  SRQVRVVFKSLMVGSKVSSSRFKLTLTTYVAKMLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVIC
        SR +   F  +  G     S+++   T+   KMLPQR+KT ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRL CFK VWSYIKTNNLQDPTNKNVVIC
Subjt:  SRQVRVVFKSLMVGSKVSSSRFKLTLTTYVAKMLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVIC

Query:  DEKLKSILLGKPKVELAELPALIKLHFPKNPK
        DEKL+SILLGK KVELAELPALIKLHFPKNPK
Subjt:  DEKLKSILLGKPKVELAELPALIKLHFPKNPK

XP_038882021.1 upstream activation factor subunit spp27 [Benincasa hispida]7.6e-4594Show/hide
Query:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
        MLP+R+K  ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRL CFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
Subjt:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

TrEMBL top hitse value%identityAlignment
A0A0A0L2E1 SWIB domain-containing protein1.0e-4290.1Show/hide
Query:  KMLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNP
        KM  +R+K  ITDNPKKLANLIDLVNLPSTLR+FVG SQISRL CFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKN 
Subjt:  KMLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNP

Query:  K
        K
Subjt:  K

A0A1S3BL41 upstream activation factor subunit spp275.9e-4390Show/hide
Query:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
        M  +R+K  +TDNPKKLANLIDLVNLPSTLR+FVGQSQISRL CFKCVWSYIKTNNLQDPTNKNVV+CDEKLKSILLGKPKVELAELPALIKLHFPKNPK
Subjt:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

A0A6J1ELR1 upstream activation factor subunit UAF305.3e-4493Show/hide
Query:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
        MLPQR+KT ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRL CFK VWSYIKTNNLQDPTNKNVVICDEKLKSILLGK K+ELAELPALIKLHFPKNPK
Subjt:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

A0A6J1HWJ0 protein TRI1 isoform X11.1e-4475.76Show/hide
Query:  SRQVRVVFKSLMVGSKVSSSRFKLTLTTYVAKMLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVIC
        SR +   F  +  G     S+++   T+   KMLPQR+KT ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRL CFK VWSYIKTNNLQDPTNKNVVIC
Subjt:  SRQVRVVFKSLMVGSKVSSSRFKLTLTTYVAKMLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVIC

Query:  DEKLKSILLGKPKVELAELPALIKLHFPKNPK
        DEKL+SILLGK KVELAELPALIKLHFPKNPK
Subjt:  DEKLKSILLGKPKVELAELPALIKLHFPKNPK

A0A6J1HY33 upstream activation factor subunit UAF30 isoform X29.1e-4493Show/hide
Query:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
        MLPQR+KT ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRL CFK VWSYIKTNNLQDPTNKNVVICDEKL+SILLGK KVELAELPALIKLHFPKNPK
Subjt:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

SwissProt top hitse value%identityAlignment
O74503 Upstream activation factor subunit spp271.1e-0644.23Show/hide
Query:  VNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSI
        + L   L +F+G  Q+SR +  K +W YIK ++LQDP +K  ++CD+KLKS+
Subjt:  VNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSI

Q05024 Protein TRI12.8e-0531.33Show/hide
Query:  DNPKKLANLIDLVNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLH
        D+P   +  +  V L + L+ F+G  ++ R +  K +W YIK ++LQ+P ++  ++CDEK++ I  GK K+ +  +  L+  H
Subjt:  DNPKKLANLIDLVNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLH

Q08747 Upstream activation factor subunit UAF303.3e-0629.9Show/hide
Query:  QRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
        ++ K T++ +P         V L  +L   +G+ +++R    + +W+YIK +NLQ+P NK  ++CDEKL+ ++LGK    + E+  ++  H  +  K
Subjt:  QRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

Arabidopsis top hitse value%identityAlignment
AT1G31760.1 SWIB/MDM2 domain superfamily protein7.0e-1244.93Show/hide
Query:  LRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKN
        L  F G+ +++R    K VW Y+K +NLQ+P NK  + CD+KLK+I  GK KV + E+  L+  HFPK+
Subjt:  LRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKN

AT2G35605.1 SWIB/MDM2 domain superfamily protein2.6e-1441.77Show/hide
Query:  LIDLVNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKN
        ++ +V +   L +F+G++++SR    K +W YIK NNLQ+P NK  ++CDE+LK+I  GK  V   E+  L+  HFPK+
Subjt:  LIDLVNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKN

AT4G26810.1 SWIB/MDM2 domain superfamily protein3.8e-4285Show/hide
Query:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
        MLPQRLK  ITDNPKKL NLIDLVNLPSTLR+FVGQSQISRL CF  VWSYIKTNNLQDP NKNVVICDEKLKSILLGK +VEL +LP+LIKLHFPK  K
Subjt:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

AT4G26810.2 SWIB/MDM2 domain superfamily protein3.8e-4285Show/hide
Query:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
        MLPQRLK  ITDNPKKL NLIDLVNLPSTLR+FVGQSQISRL CF  VWSYIKTNNLQDP NKNVVICDEKLKSILLGK +VEL +LP+LIKLHFPK  K
Subjt:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

AT4G34290.1 SWIB/MDM2 domain superfamily protein3.4e-1146.97Show/hide
Query:  LRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHF
        ++D VG  +I R +  K +W+YIK ++LQDP NK  ++CDEKLK I  GK +V   E+  LI  HF
Subjt:  LRDFVGQSQISRLRCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCGTAGTGCTTGGATTCTCTATTCCTTAGTTCGTTTCAAGGCTCCGTTGGTTGTCAGTTGTCGTCACGACAAGGTTAGAGTTGTGTTTAAGTCGTTGATGGTAGG
TTCTAAAGTGTCTAGCTCAAGGTTTAAGCTGGCATTGACAACCTATGTGGCCGCTGCCGCCTCCCTTCAGCCCCGCCACCATCTTAACGAGTCGCCGCCGTCCGAAGTCA
CGCAGTCCAGCCGCTCGTCGCGCCGTCGTTATCGCGTGGGTCTCTTCCTCCGCGCGGTTCTCTTCGCAGGTCTTTCCCTCTGCGCCGTCTCTCCCTCTCGTGCTGCCGTT
CAGCCACCGCTTGCAGTGCTGCCGCCTCCGTTGCAGCTCGTGCCGCCGCCGCTAGCCCGATCTCTCTGTTCTCTGCCTTGTTTTAGGCTCGATCTAAGAGTGTCTTGCAT
TGTCGTGGTTAGATCTAGCGCGGACAGCAGCTTGAAGCATCGTCTCCTCCGCGTTTCAGCCTTAGAGAATCATCTTGCGTGCATAGCAACTTGGAGTCCCGTCGATCTCG
TGTCAGCCGATTTTGCCTCTGTCCAGCAGCATTCTTGGTTGTTGTTGGCGTCGTTTGGCGTTTCCGTGCCGCCTAGTGTTCGATTGGGTTCGATACACTTCAAACTCAAG
TACCCACTGCCCAAGGAGCGTTCTAACACGTTGTGCAAGGTTAGACTAACCCGTCTAACGTGGAAACGGTTCCGTTTGCTGCCGTTGTATTTAGGAGCTTGTCCTCGTTG
CTTAGGCTTCTTGGAGTTGCCTTGGAAGCGTTTTAGGTACGGAGTGTCACAATCGCAAACTTTCGTATTCGGGACGGGCGATTGTGCGGCACTTGTCCTAACCCGGCGGG
CAAGTCAGCCGTACAAAAATCGCAATTCGCAGACAACTTCGGTAGTTTCTACTCGTATTGCCAACTCTTGTACAGGTAGCCGATCAATTCGGGCATTCACTGCATCTATC
TCACAGCTTTTCAGAGATCTCATCAATTCGACCTTCGACATATCGTATCGAATCAGGCACAACTCGCCCTGGACAAGCATGCCCAAGACACGGAGTGTGACGCGAAAATC
ACGTAAATTGCGCAGCACATGGCGCGGAATTCATACTGACCTAGATAGCCTAGGTTGTTTAGTTGTGTGTGCTAGAGGTTGTTCCTCGTTCTCCTCTCCATCACCAGAAC
CAGGTGGTTGCCTTAGCTCGAGGCCAAGTGTCCAGAGCTCTTCAATGGCGAATTTGAAGAAGTGGAAAGTCCCTAAAGGTGGGGAGTCGGTTTCACCTCCCATTTTCAAG
CTAGTGCTCTTTCTTCGAGTTTATCTATTGCTTTGGAGTTACCCTTTCTCTTTCGATGCTTTGTCATCTGAATCTATATGTGATTGTCAGTTGTCGTCACGACAGGTTAG
AGTTGTGTTTAAGTCGTTGATGGTAGGTTCTAAAGTGTCTAGCTCAAGGTTTAAGCTGACATTGACAACCTATGTGGCAAAAATGCTGCCACAACGATTGAAGACGACCA
TTACAGATAACCCAAAGAAGCTTGCCAACTTGATTGATCTCGTAAACCTTCCTTCAACTCTCAGAGACTTTGTGGGACAGTCCCAAATTTCTCGTCTGCGCTGTTTCAAA
TGTGTGTGGTCTTATATCAAAACCAACAATCTTCAGGATCCGACCAACAAGAATGTGGTCATTTGTGATGAGAAGTTAAAGAGTATCTTGCTAGGCAAGCCCAAGGTCGA
GCTAGCCGAACTTCCTGCCCTGATTAAATTACATTTCCCCAAAAACCCCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCCGTAGTGCTTGGATTCTCTATTCCTTAGTTCGTTTCAAGGCTCCGTTGGTTGTCAGTTGTCGTCACGACAAGGTTAGAGTTGTGTTTAAGTCGTTGATGGTAGG
TTCTAAAGTGTCTAGCTCAAGGTTTAAGCTGGCATTGACAACCTATGTGGCCGCTGCCGCCTCCCTTCAGCCCCGCCACCATCTTAACGAGTCGCCGCCGTCCGAAGTCA
CGCAGTCCAGCCGCTCGTCGCGCCGTCGTTATCGCGTGGGTCTCTTCCTCCGCGCGGTTCTCTTCGCAGGTCTTTCCCTCTGCGCCGTCTCTCCCTCTCGTGCTGCCGTT
CAGCCACCGCTTGCAGTGCTGCCGCCTCCGTTGCAGCTCGTGCCGCCGCCGCTAGCCCGATCTCTCTGTTCTCTGCCTTGTTTTAGGCTCGATCTAAGAGTGTCTTGCAT
TGTCGTGGTTAGATCTAGCGCGGACAGCAGCTTGAAGCATCGTCTCCTCCGCGTTTCAGCCTTAGAGAATCATCTTGCGTGCATAGCAACTTGGAGTCCCGTCGATCTCG
TGTCAGCCGATTTTGCCTCTGTCCAGCAGCATTCTTGGTTGTTGTTGGCGTCGTTTGGCGTTTCCGTGCCGCCTAGTGTTCGATTGGGTTCGATACACTTCAAACTCAAG
TACCCACTGCCCAAGGAGCGTTCTAACACGTTGTGCAAGGTTAGACTAACCCGTCTAACGTGGAAACGGTTCCGTTTGCTGCCGTTGTATTTAGGAGCTTGTCCTCGTTG
CTTAGGCTTCTTGGAGTTGCCTTGGAAGCGTTTTAGGTACGGAGTGTCACAATCGCAAACTTTCGTATTCGGGACGGGCGATTGTGCGGCACTTGTCCTAACCCGGCGGG
CAAGTCAGCCGTACAAAAATCGCAATTCGCAGACAACTTCGGTAGTTTCTACTCGTATTGCCAACTCTTGTACAGGTAGCCGATCAATTCGGGCATTCACTGCATCTATC
TCACAGCTTTTCAGAGATCTCATCAATTCGACCTTCGACATATCGTATCGAATCAGGCACAACTCGCCCTGGACAAGCATGCCCAAGACACGGAGTGTGACGCGAAAATC
ACGTAAATTGCGCAGCACATGGCGCGGAATTCATACTGACCTAGATAGCCTAGGTTGTTTAGTTGTGTGTGCTAGAGGTTGTTCCTCGTTCTCCTCTCCATCACCAGAAC
CAGGTGGTTGCCTTAGCTCGAGGCCAAGTGTCCAGAGCTCTTCAATGGCGAATTTGAAGAAGTGGAAAGTCCCTAAAGGTGGGGAGTCGGTTTCACCTCCCATTTTCAAG
CTAGTGCTCTTTCTTCGAGTTTATCTATTGCTTTGGAGTTACCCTTTCTCTTTCGATGCTTTGTCATCTGAATCTATATGTGATTGTCAGTTGTCGTCACGACAGGTTAG
AGTTGTGTTTAAGTCGTTGATGGTAGGTTCTAAAGTGTCTAGCTCAAGGTTTAAGCTGACATTGACAACCTATGTGGCAAAAATGCTGCCACAACGATTGAAGACGACCA
TTACAGATAACCCAAAGAAGCTTGCCAACTTGATTGATCTCGTAAACCTTCCTTCAACTCTCAGAGACTTTGTGGGACAGTCCCAAATTTCTCGTCTGCGCTGTTTCAAA
TGTGTGTGGTCTTATATCAAAACCAACAATCTTCAGGATCCGACCAACAAGAATGTGGTCATTTGTGATGAGAAGTTAAAGAGTATCTTGCTAGGCAAGCCCAAGGTCGA
GCTAGCCGAACTTCCTGCCCTGATTAAATTACATTTCCCCAAAAACCCCAAGTGA
Protein sequenceShow/hide protein sequence
MFRSAWILYSLVRFKAPLVVSCRHDKVRVVFKSLMVGSKVSSSRFKLALTTYVAAAASLQPRHHLNESPPSEVTQSSRSSRRRYRVGLFLRAVLFAGLSLCAVSPSRAAV
QPPLAVLPPPLQLVPPPLARSLCSLPCFRLDLRVSCIVVVRSSADSSLKHRLLRVSALENHLACIATWSPVDLVSADFASVQQHSWLLLASFGVSVPPSVRLGSIHFKLK
YPLPKERSNTLCKVRLTRLTWKRFRLLPLYLGACPRCLGFLELPWKRFRYGVSQSQTFVFGTGDCAALVLTRRASQPYKNRNSQTTSVVSTRIANSCTGSRSIRAFTASI
SQLFRDLINSTFDISYRIRHNSPWTSMPKTRSVTRKSRKLRSTWRGIHTDLDSLGCLVVCARGCSSFSSPSPEPGGCLSSRPSVQSSSMANLKKWKVPKGGESVSPPIFK
LVLFLRVYLLLWSYPFSFDALSSESICDCQLSSRQVRVVFKSLMVGSKVSSSRFKLTLTTYVAKMLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLRCFK
CVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK