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Spg008846 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008846
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold10:36347597..36347905
RNA-Seq ExpressionSpg008846
SyntenySpg008846
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054914.1 hypothetical protein E6C27_scaffold43052G00420 [Cucumis melo var. makuwa]7.2e-0440.78Show/hide
Query:  MGFSAAN-LVCAVLVASIALNLPPETTANSVNLSSPPPVHSSEPRLEKSLDAVKVSSKYKLRLAFAGKNGDDESELPPLSRAFLKPRYPWPKRYVPKSSP
        MG S AN L+  + VASIAL LP ETTA ++  + P P+      +  +L  V+++ +         +NGDDES+  P S+     R PWPK  V KS P
Subjt:  MGFSAAN-LVCAVLVASIALNLPPETTANSVNLSSPPPVHSSEPRLEKSLDAVKVSSKYKLRLAFAGKNGDDESELPPLSRAFLKPRYPWPKRYVPKSSP

Query:  PPF
        PPF
Subjt:  PPF

KAG6578898.1 hypothetical protein SDJN03_23346, partial [Cucurbita argyrosperma subsp. sororia]3.2e-0442.86Show/hide
Query:  MGFSAANLVCAVLVASIALNLPPETTANSVNLSS---PPPVHSSEPRLEKSLDAVKVSSKYKLRLAFAGKNGDDESELPPLSRAFLKPRYPWPKRYVPKS
        MG+S ANL+  +LVASIAL LP E  A+++   S   PP  HS   +L      +KVS   K        +G+DE+E P  S+     R PWPK+ VPK+
Subjt:  MGFSAANLVCAVLVASIALNLPPETTANSVNLSS---PPPVHSSEPRLEKSLDAVKVSSKYKLRLAFAGKNGDDESELPPLSRAFLKPRYPWPKRYVPKS

Query:  SPPPF
         PPPF
Subjt:  SPPPF

KAG6578899.1 hypothetical protein SDJN03_23347, partial [Cucurbita argyrosperma subsp. sororia]1.4e-0745.71Show/hide
Query:  MGFSAANLVCAVLVASIALNLPPETTANSVNLSS--PPPVHSSEPRLEKSLDAVKVSSKYKLRLAFAGKNGDDESELPPLSRAFLK-PRYPWPKRYVPKS
        MG+S ANL   +LVASIAL  P  TTA++V   S  PPP++ S          +K+S + K       +NG+DESE PP S    + PR PWPK+ V KS
Subjt:  MGFSAANLVCAVLVASIALNLPPETTANSVNLSS--PPPVHSSEPRLEKSLDAVKVSSKYKLRLAFAGKNGDDESELPPLSRAFLK-PRYPWPKRYVPKS

Query:  SPPPF
         PPPF
Subjt:  SPPPF

TrEMBL top hitse value%identityAlignment
A0A0A0KBD3 Uncharacterized protein4.2e-1050Show/hide
Query:  SIALNLPPETTANSVNLS---SPP----PVHSSEPRLEKSLDAVKVSSKYKLRLAFAGKNGDDESELPPLSRAFLKPRYPWPKRYVPKSSPPPF
        S  L++ P  T +SVNLS   SPP    P   S   L    D VKV S  KL +   GKNGD E +LP LS+  L PR PWP+RY PKS PPPF
Subjt:  SIALNLPPETTANSVNLS---SPP----PVHSSEPRLEKSLDAVKVSSKYKLRLAFAGKNGDDESELPPLSRAFLKPRYPWPKRYVPKSSPPPF

A0A5A7UIB8 Uncharacterized protein3.5e-0440.78Show/hide
Query:  MGFSAAN-LVCAVLVASIALNLPPETTANSVNLSSPPPVHSSEPRLEKSLDAVKVSSKYKLRLAFAGKNGDDESELPPLSRAFLKPRYPWPKRYVPKSSP
        MG S AN L+  + VASIAL LP ETTA ++  + P P+      +  +L  V+++ +         +NGDDES+  P S+     R PWPK  V KS P
Subjt:  MGFSAAN-LVCAVLVASIALNLPPETTANSVNLSSPPPVHSSEPRLEKSLDAVKVSSKYKLRLAFAGKNGDDESELPPLSRAFLKPRYPWPKRYVPKSSP

Query:  PPF
        PPF
Subjt:  PPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTTTCAGCAGCCAATCTAGTTTGTGCTGTTTTGGTAGCATCCATCGCTCTTAACCTTCCGCCGGAAACCACCGCAAACTCCGTCAACCTTTCTTCTCCGCCACC
GGTACACAGCTCAGAGCCACGTCTCGAGAAATCATTGGACGCTGTAAAAGTTAGTTCGAAATACAAGCTTCGTCTTGCCTTTGCAGGCAAAAATGGAGATGATGAATCTG
AATTACCACCATTATCGAGGGCTTTTCTTAAGCCAAGGTACCCTTGGCCAAAACGCTACGTCCCTAAATCTTCACCACCTCCATTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGTTTTCAGCAGCCAATCTAGTTTGTGCTGTTTTGGTAGCATCCATCGCTCTTAACCTTCCGCCGGAAACCACCGCAAACTCCGTCAACCTTTCTTCTCCGCCACC
GGTACACAGCTCAGAGCCACGTCTCGAGAAATCATTGGACGCTGTAAAAGTTAGTTCGAAATACAAGCTTCGTCTTGCCTTTGCAGGCAAAAATGGAGATGATGAATCTG
AATTACCACCATTATCGAGGGCTTTTCTTAAGCCAAGGTACCCTTGGCCAAAACGCTACGTCCCTAAATCTTCACCACCTCCATTCTAG
Protein sequenceShow/hide protein sequence
MGFSAANLVCAVLVASIALNLPPETTANSVNLSSPPPVHSSEPRLEKSLDAVKVSSKYKLRLAFAGKNGDDESELPPLSRAFLKPRYPWPKRYVPKSSPPPF