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Spg008867 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008867
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDynein light chain
Genome locationscaffold10:37561402..37564250
RNA-Seq ExpressionSpg008867
SyntenySpg008867
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046340.1 dynein light chain 1 [Cucumis melo var. makuwa]6.9e-4082.46Show/hide
Query:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKLHYPVFFWDFGSVDV-FWDSYWT
        M+GAEMELERR+KFLNGLILKKKA EQQEQRDRLNVRVRASDM FPLQNRAFSCARELLDSMPGKLDSKRLALALKKL  PVF  DF  V V FW  Y T
Subjt:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKLHYPVFFWDFGSVDV-FWDSYWT

Query:  VLSSVGNVFDEMPL
         LS +  VFDEMPL
Subjt:  VLSSVGNVFDEMPL
XP_004150121.1 dynein light chain 1, cytoplasmic [Cucumis sativus]8.4e-3094.81Show/hide
Query:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKK
        M+GAEMELERR+KFLNGLILKKKA EQQEQRDRLNVRVRASDM FPLQNRAFSCARELLDSMPGKLDSKRLALALKK
Subjt:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKK
XP_022146325.1 dynein light chain LC6, flagellar outer arm [Momordica charantia]2.9e-3093.51Show/hide
Query:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKK
        MEGAEMELERR+KFLNGLI KKKAVEQQE+RDRLN+RVRASDMPFPLQNRAFSCARELLDSMPGKLDSKR ALALKK
Subjt:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKK
XP_023551552.1 dynein light chain LC6, flagellar outer arm [Cucurbita pepo subsp. pepo]6.4e-3094.81Show/hide
Query:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKK
        MEGAEMELERR+KFLNGLILKKKA E QE RDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKK
Subjt:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKK
XP_038906759.1 dynein light chain LC6, flagellar outer arm [Benincasa hispida]3.8e-3094.81Show/hide
Query:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKK
        M+GAEMELERR+KFL+GLILKKKA EQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKK
Subjt:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKK
TrEMBL top hitse value%identityAlignment
A0A0A0KPF8 Dynein light chain4.1e-3094.81Show/hide
Query:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKK
        M+GAEMELERR+KFLNGLILKKKA EQQEQRDRLNVRVRASDM FPLQNRAFSCARELLDSMPGKLDSKRLALALKK
Subjt:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKK
A0A1S3CSY6 Dynein light chain4.1e-3094.81Show/hide
Query:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKK
        M+GAEMELERR+KFLNGLILKKKA EQQEQRDRLNVRVRASDM FPLQNRAFSCARELLDSMPGKLDSKRLALALKK
Subjt:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKK
A0A5A7TT68 Dynein light chain3.3e-4082.46Show/hide
Query:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKLHYPVFFWDFGSVDV-FWDSYWT
        M+GAEMELERR+KFLNGLILKKKA EQQEQRDRLNVRVRASDM FPLQNRAFSCARELLDSMPGKLDSKRLALALKKL  PVF  DF  V V FW  Y T
Subjt:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKLHYPVFFWDFGSVDV-FWDSYWT

Query:  VLSSVGNVFDEMPL
         LS +  VFDEMPL
Subjt:  VLSSVGNVFDEMPL
A0A6J1CWZ8 Dynein light chain1.4e-3093.51Show/hide
Query:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKK
        MEGAEMELERR+KFLNGLI KKKAVEQQE+RDRLN+RVRASDMPFPLQNRAFSCARELLDSMPGKLDSKR ALALKK
Subjt:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKK
A0A6J1FHG9 Dynein light chain4.1e-3094.81Show/hide
Query:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKK
        MEGAEMELERR KFLNGLILKKKA E QE RDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKK
Subjt:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G23220.1 Dynein light chain type 1 family protein8.7e-2572.73Show/hide
Query:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKK
        MEG E+ELERR+KFLN LI KKKA EQQ+Q+D  NVRVRASDMP P QNRAFS +RE+L++ PGK D+KRLA ALKK
Subjt:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKK
AT5G20110.1 Dynein light chain type 1 family protein6.5e-0450Show/hide
Query:  DRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKK
        + L VR+ A+DMP  +Q  AF CAR  LDS+  K  SK +A  LKK
Subjt:  DRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGAGCGGAGATGGAGCTTGAGCGGCGGAACAAGTTTCTGAATGGACTGATTCTGAAGAAGAAGGCGGTGGAGCAGCAAGAGCAGCGCGATCGTCTCAATGTTCG
CGTCAGAGCTTCCGATATGCCGTTTCCTCTGCAGAATCGCGCTTTTAGTTGCGCTCGTGAACTGCTCGATTCGATGCCTGGGAAGCTCGATAGCAAACGCCTTGCTCTCG
CCCTTAAAAAGCTTCATTATCCAGTTTTCTTTTGGGATTTTGGGTCAGTGGATGTTTTTTGGGATAGTTATTGGACTGTCTTGAGTAGTGTCGGGAATGTGTTTGATGAA
ATGCCTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGAGCGGAGATGGAGCTTGAGCGGCGGAACAAGTTTCTGAATGGACTGATTCTGAAGAAGAAGGCGGTGGAGCAGCAAGAGCAGCGCGATCGTCTCAATGTTCG
CGTCAGAGCTTCCGATATGCCGTTTCCTCTGCAGAATCGCGCTTTTAGTTGCGCTCGTGAACTGCTCGATTCGATGCCTGGGAAGCTCGATAGCAAACGCCTTGCTCTCG
CCCTTAAAAAGCTTCATTATCCAGTTTTCTTTTGGGATTTTGGGTCAGTGGATGTTTTTTGGGATAGTTATTGGACTGTCTTGAGTAGTGTCGGGAATGTGTTTGATGAA
ATGCCTCTTTGA
Protein sequenceShow/hide protein sequence
MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKLHYPVFFWDFGSVDVFWDSYWTVLSSVGNVFDE
MPL