CuGenDBv2

Gene ID	Spg008878
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Transcription initiation factor TFIID subunit 11-like
Genome location	scaffold10:33045757..33046365
RNA-Seq Expression	Spg008878
Synteny	Spg008878
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022141363.1 prothymosin alpha-B [Momordica charantia]

1.3e-68

78.43

Show/hide

Query:  MAETTSREEATFDAKRKPDPCCEAKEERSNKIQKLEVVEGDSCNAVKNGENGDHKKSDKQIDDVSSVAEGKDGGVVGTDVDAGEADDEGDEEEEYEDDEE
        MAETTSREE TFDAKRKPDPCCEAKEE SNKIQKLEVV+ +SC+ VK  ENGDHK+SD+ IDD S  AEGKD G VG  VDAGEADDE D+EE+YED   
Subjt:  MAETTSREEATFDAKRKPDPCCEAKEERSNKIQKLEVVEGDSCNAVKNGENGDHKKSDKQIDDVSSVAEGKDGGVVGTDVDAGEADDEGDEEEEYEDDEE

Query:  EDDSEDGEKSSAKAAVDRKGKGIMKDDKGKGKLIEE--DDDDEDSSDDASDLGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDDDSS
        E+D  D E+ +++A  DRKGKGI+KDDKGKGKLIEE  DDDDEDSSD  S+LGSEESDLSDDPL EVDLDNILPSRTRRRTVHPGVYFA DLGNDDDDSS
Subjt:  EDDSEDGEKSSAKAAVDRKGKGIMKDDKGKGKLIEE--DDDDEDSSDDASDLGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDDDSS

Query:  DSDA
        DSDA
Subjt:  DSDA

XP_022939215.1 prostatic spermine-binding protein isoform X2 [Cucurbita moschata]

4.0e-67

78.47

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Query:  MAET-TSREEATFDAKRKP-DPCCEAKEERSNKIQKLEVVEGDSCNAV-KNGENGDHKKSDKQIDDVSSVAEGKDGGVVGTDVDAGEADDEGDEEEEYED
        MAET +SREE  FDAKRKP DPCCEAKEERSNKIQKLEVVEG+ CN V KNG+NGDHK+ D QID++SS AEGKD GV+  DVDAG   DEG      ED
Subjt:  MAET-TSREEATFDAKRKP-DPCCEAKEERSNKIQKLEVVEGDSCNAV-KNGENGDHKKSDKQIDDVSSVAEGKDGGVVGTDVDAGEADDEGDEEEEYED

Query:  DEEEDDSEDGEKSSAKAA-VDRKGKGIMKDDKGKGKLIEE---DDDDEDSSDDASDLGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGND
        D++EDD E+GEKSS KAA  DRKGKGIMKDDKGKGKLIEE   DDDDEDSSDD S+  +EESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGN+
Subjt:  DEEEDDSEDGEKSSAKAA-VDRKGKGIMKDDKGKGKLIEE---DDDDEDSSDDASDLGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGND

Query:  DDDSSDSDA
        DDDSSDSDA
Subjt:  DDDSSDSDA

XP_022992871.1 nucleolin-like [Cucurbita maxima]

5.3e-67

77.51

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Query:  MAET-TSREEATFDAKRKP-DPCCEAKEERSNKIQKLEVVEGDSCNAV-KNGENGDHKKSDKQIDDVSSVAEGKDGGVVGTDVDAGEADDEGDEEEEYED
        MAET +SREE  FDAKRKP DPCCEAKEERSNKIQKLEVVEG+ CN V KNG+NGDHK+ D+QID +SS AEGKD GV   DVDA      G+E E+Y D
Subjt:  MAET-TSREEATFDAKRKP-DPCCEAKEERSNKIQKLEVVEGDSCNAV-KNGENGDHKKSDKQIDDVSSVAEGKDGGVVGTDVDAGEADDEGDEEEEYED

Query:  DEEEDDSEDGEKSSAKAAVDRKGKGIMKDDKGKGKLIEE----DDDDEDSSDDASDLGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGND
           EDD E+GEKSS KAA DRKGKGIMKDDKGKGKLIEE    DDDDEDSSDD S+  +EESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGN+
Subjt:  DEEEDDSEDGEKSSAKAAVDRKGKGIMKDDKGKGKLIEE----DDDDEDSSDDASDLGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGND

Query:  DDDSSDSDA
        DDDSSDSDA
Subjt:  DDDSSDSDA

XP_023551083.1 nucleolin-like [Cucurbita pepo subsp. pepo]

9.0e-67

77.62

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Query:  MAET-TSREEATFDAKRKP-DPCCEAKEERSNKIQKLEVVEGDSCNAV-KNGENGDHKKSDKQIDDVSSVAEGKDGGVVGTDVDAGEADDEGDEEEEYED
        MAET +SREE  FD KRKP DPCCEAKEERSNKIQKLEVVEG+ CN V KNG+NGDHK+ D+QID++SS AEGKD GV+  DVDAG   DEG      ED
Subjt:  MAET-TSREEATFDAKRKP-DPCCEAKEERSNKIQKLEVVEGDSCNAV-KNGENGDHKKSDKQIDDVSSVAEGKDGGVVGTDVDAGEADDEGDEEEEYED

Query:  DEEEDDSEDGEKSSAKAA-VDRKGKGIMKDDKGKGKLIEE----DDDDEDSSDDASDLGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGN
        D++EDD E+GEKSS KAA  DRKGKGIMKDDKGKGKLIEE    DDDDEDSSDD S+  +EESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGN
Subjt:  DEEEDDSEDGEKSSAKAA-VDRKGKGIMKDDKGKGKLIEE----DDDDEDSSDDASDLGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGN

Query:  DDDDSSDSDA
        +DDDSSDSDA
Subjt:  DDDDSSDSDA

XP_038906649.1 pheromone-processing carboxypeptidase KEX1 [Benincasa hispida]

1.4e-67

80.38

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Query:  MAETTSREEATFDAKRKP-DPCCEAKEERSNKIQKLEVVEG-DSCNAV-KNGENGD-HKKSDKQIDDV-SSVAEGK-DGGVVGTDVDAGEADDEGDEEEE
        MAETT+ EE  FDAKRKP DPCCEAKEERSNK+QKLEVVEG +SCN V KNGENGD HK++D+ ID+V SSVAEGK D GVVG D+DAG         +E
Subjt:  MAETTSREEATFDAKRKP-DPCCEAKEERSNKIQKLEVVEG-DSCNAV-KNGENGD-HKKSDKQIDDV-SSVAEGK-DGGVVGTDVDAGEADDEGDEEEE

Query:  YEDDEEEDDSEDGEKSSAKAAVDRKGKGIMKDDKGKGKLIEE-DDDDEDSSDDASDLGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGND
         EDDE+EDDSE+GEKSS KAA DRKGKGIMKDDKGKGKLIEE DDDDEDSSDD S+L SEESDLSDDPLAEVDLDNILPSRTRRR VHPGVYFATDLGND
Subjt:  YEDDEEEDDSEDGEKSSAKAAVDRKGKGIMKDDKGKGKLIEE-DDDDEDSSDDASDLGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGND

Query:  DDDSSDSDA
        DDDSSDSDA
Subjt:  DDDSSDSDA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KMR8 Uncharacterized protein

3.2e-62

77.99

Show/hide

Query:  MAETTSR-EEATFDAKRKP-DPCCEAKEERSNKIQKLEVVEG-DSCNAV-KNGENGDHKKSDKQIDDVSS-VAEGK-DGGVVGTDVDAGEADDEGDEEEE
        MAE T+R EE  FDAKRKP D C + KEERSNKIQKLEVVEG +SCN V  N ENGDHK SD+Q+D++SS V EGK D GV G  +DA      GDEEE+
Subjt:  MAETTSR-EEATFDAKRKP-DPCCEAKEERSNKIQKLEVVEG-DSCNAV-KNGENGDHKKSDKQIDDVSS-VAEGK-DGGVVGTDVDAGEADDEGDEEEE

Query:  YEDDEEEDDSEDGEKSSAKAAVDRKGKGIMKDDKGKGKLIEE-DDDDEDSSDDASDLGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGND
        YED   EDDSED EKSSAK A DRKGKGIMKDDKGKGKLIEE DDDDEDSSDD S L SEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGND
Subjt:  YEDDEEEDDSEDGEKSSAKAAVDRKGKGIMKDDKGKGKLIEE-DDDDEDSSDDASDLGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGND

Query:  DDDSSDSDA
        DDDSSDSDA
Subjt:  DDDSSDSDA

A0A5D3E1E7 Acidic repeat-containing protein

2.1e-61

77.99

Show/hide

Query:  MAETTSR-EEATFDAKRKP-DPCCEAKEERSNKIQKLEVVEG-DSCNAVK-NGENGDHKKSDKQIDDVSS-VAEGK-DGGVVGTDVDAGEADDEGDEEEE
        MAE T+R EE  FDAKRKP D C + KEE SNKIQKLEVVEG +SCN VK N ENGDHK SD+QID+VSS V EGK D GV G  +DA      GDEEE+
Subjt:  MAETTSR-EEATFDAKRKP-DPCCEAKEERSNKIQKLEVVEG-DSCNAVK-NGENGDHKKSDKQIDDVSS-VAEGK-DGGVVGTDVDAGEADDEGDEEEE

Query:  YEDDEEEDDSEDGEKSSAKAAVDRKGKGIMKDDKGKGKLIEE-DDDDEDSSDDASDLGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGND
        YED   EDDSED EKSS K A DRKGKGIMKDDKGKGKLIEE DDDDEDSSDD SDL SEESDLSDDPLAEVDLDNILPSRTRRR VHPGVYFATDL ND
Subjt:  YEDDEEEDDSEDGEKSSAKAAVDRKGKGIMKDDKGKGKLIEE-DDDDEDSSDDASDLGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGND

Query:  DDDSSDSDA
        DDDSSDSDA
Subjt:  DDDSSDSDA

A0A6J1CKB5 prothymosin alpha-B

6.1e-69

78.43

Show/hide

Query:  MAETTSREEATFDAKRKPDPCCEAKEERSNKIQKLEVVEGDSCNAVKNGENGDHKKSDKQIDDVSSVAEGKDGGVVGTDVDAGEADDEGDEEEEYEDDEE
        MAETTSREE TFDAKRKPDPCCEAKEE SNKIQKLEVV+ +SC+ VK  ENGDHK+SD+ IDD S  AEGKD G VG  VDAGEADDE D+EE+YED   
Subjt:  MAETTSREEATFDAKRKPDPCCEAKEERSNKIQKLEVVEGDSCNAVKNGENGDHKKSDKQIDDVSSVAEGKDGGVVGTDVDAGEADDEGDEEEEYEDDEE

Query:  EDDSEDGEKSSAKAAVDRKGKGIMKDDKGKGKLIEE--DDDDEDSSDDASDLGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDDDSS
        E+D  D E+ +++A  DRKGKGI+KDDKGKGKLIEE  DDDDEDSSD  S+LGSEESDLSDDPL EVDLDNILPSRTRRRTVHPGVYFA DLGNDDDDSS
Subjt:  EDDSEDGEKSSAKAAVDRKGKGIMKDDKGKGKLIEE--DDDDEDSSDDASDLGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDDDSS

Query:  DSDA
        DSDA
Subjt:  DSDA

A0A6J1FM23 prostatic spermine-binding protein isoform X2

2.0e-67

78.47

Show/hide

Query:  MAET-TSREEATFDAKRKP-DPCCEAKEERSNKIQKLEVVEGDSCNAV-KNGENGDHKKSDKQIDDVSSVAEGKDGGVVGTDVDAGEADDEGDEEEEYED
        MAET +SREE  FDAKRKP DPCCEAKEERSNKIQKLEVVEG+ CN V KNG+NGDHK+ D QID++SS AEGKD GV+  DVDAG   DEG      ED
Subjt:  MAET-TSREEATFDAKRKP-DPCCEAKEERSNKIQKLEVVEGDSCNAV-KNGENGDHKKSDKQIDDVSSVAEGKDGGVVGTDVDAGEADDEGDEEEEYED

Query:  DEEEDDSEDGEKSSAKAA-VDRKGKGIMKDDKGKGKLIEE---DDDDEDSSDDASDLGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGND
        D++EDD E+GEKSS KAA  DRKGKGIMKDDKGKGKLIEE   DDDDEDSSDD S+  +EESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGN+
Subjt:  DEEEDDSEDGEKSSAKAA-VDRKGKGIMKDDKGKGKLIEE---DDDDEDSSDDASDLGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGND

Query:  DDDSSDSDA
        DDDSSDSDA
Subjt:  DDDSSDSDA

A0A6J1K0H1 nucleolin-like

2.6e-67

77.51

Show/hide

Query:  MAET-TSREEATFDAKRKP-DPCCEAKEERSNKIQKLEVVEGDSCNAV-KNGENGDHKKSDKQIDDVSSVAEGKDGGVVGTDVDAGEADDEGDEEEEYED
        MAET +SREE  FDAKRKP DPCCEAKEERSNKIQKLEVVEG+ CN V KNG+NGDHK+ D+QID +SS AEGKD GV   DVDA      G+E E+Y D
Subjt:  MAET-TSREEATFDAKRKP-DPCCEAKEERSNKIQKLEVVEGDSCNAV-KNGENGDHKKSDKQIDDVSSVAEGKDGGVVGTDVDAGEADDEGDEEEEYED

Query:  DEEEDDSEDGEKSSAKAAVDRKGKGIMKDDKGKGKLIEE----DDDDEDSSDDASDLGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGND
           EDD E+GEKSS KAA DRKGKGIMKDDKGKGKLIEE    DDDDEDSSDD S+  +EESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGN+
Subjt:  DEEEDDSEDGEKSSAKAAVDRKGKGIMKDDKGKGKLIEE----DDDDEDSSDDASDLGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGND

Query:  DDDSSDSDA
        DDDSSDSDA
Subjt:  DDDSSDSDA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G12830.1 unknown protein

1.8e-28

45.09

Show/hide

Query:  MAETTSREEATFDAKRKPDPCCEAKEERSNKIQKLEVVEGDSCNAVKNGE-NGD------HKKSDKQIDDVSSV-----AEGKDGGVVGTDVDAGEADDE
        MA+  ++++++F  KRK D  C+ ++  +NK QKL      + +  K+GE NG       +  +++ I   SSV     AE  + GV+G   D G  +++
Subjt:  MAETTSREEATFDAKRKPDPCCEAKEERSNKIQKLEVVEGDSCNAVKNGE-NGD------HKKSDKQIDDVSSV-----AEGKDGGVVGTDVDAGEADDE

Query:  GDEEEEYEDDEEEDDSEDGEKSSAKAAVDRKGKGIMKDDKGKGKLI--EEDDDDEDSSDDASDLG---SEESDLSDDPLAEVDLDNILPSRTRRRTVHPG
         DEE+E EDDEEE++ E+         VDRKGKGI ++DKGKGK+I  EE DD++DS DD  D G    +ESD SDDPLAEVDLDNILPSRTRRR+  PG
Subjt:  GDEEEEYEDDEEEDDSEDGEKSSAKAAVDRKGKGIMKDDKGKGKLI--EEDDDDEDSSDDASDLG---SEESDLSDDPLAEVDLDNILPSRTRRRTVHPG

Query:  VYFATDLGN-----DDDDSSDSDA
        V+   +  N     +DD+SSDSDA
Subjt:  VYFATDLGN-----DDDDSSDSDA

Sequences

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CDS sequence

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ATGGCGGAAACTACCAGTAGAGAGGAGGCCACATTTGATGCGAAGCGCAAACCTGATCCCTGCTGCGAAGCAAAAGAGGAGCGTTCGAACAAAATTCAGAAGCTCGAAGT
GGTTGAGGGCGATTCCTGCAATGCTGTGAAGAATGGTGAGAATGGAGACCATAAGAAGAGTGATAAACAGATTGATGACGTTTCTTCGGTTGCGGAAGGGAAAGATGGTG
GAGTTGTTGGAACCGATGTAGATGCGGGAGAAGCGGATGATGAGGGAGACGAGGAGGAGGAGTACGAGGATGACGAAGAGGAAGACGACAGTGAGGATGGTGAAAAGTCG
AGTGCGAAAGCGGCTGTGGATCGTAAGGGGAAGGGCATCATGAAGGATGACAAAGGAAAAGGGAAATTGATAGAGGAAGACGACGACGACGAAGATTCCAGTGATGATGC
AAGCGACTTAGGCTCTGAAGAGAGCGATTTGTCGGATGATCCGCTTGCGGAGGTCGATTTGGACAACATCCTTCCTTCAAGGACGCGGAGGCGGACTGTTCATCCTGGAG
TTTATTTTGCTACGGATCTGGGGAACGATGACGACGATAGCAGTGATAGCGATGCTTGA

mRNA sequence

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Protein sequence

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MAETTSREEATFDAKRKPDPCCEAKEERSNKIQKLEVVEGDSCNAVKNGENGDHKKSDKQIDDVSSVAEGKDGGVVGTDVDAGEADDEGDEEEEYEDDEEEDDSEDGEKS
SAKAAVDRKGKGIMKDDKGKGKLIEEDDDDEDSSDDASDLGSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDDDSSDSDA

Spg008878 (gene) of Sponge gourd (cylindrica) v1 genome