; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg008913 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008913
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiontranscription factor bHLH112-like
Genome locationscaffold5:24701567..24708074
RNA-Seq ExpressionSpg008913
SyntenySpg008913
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052738.1 transcription factor bHLH112-like isoform X1 [Cucumis melo var. makuwa]1.4e-0860.32Show/hide
Query:  EEKLGDRVTALQQLVSPFGK----------------------VLSTPYMKNNNGITPIQHQQV
        +EKLGDRVTALQQLVSPFGK                      VLSTPYMKN+NGITP+QHQQV
Subjt:  EEKLGDRVTALQQLVSPFGK----------------------VLSTPYMKNNNGITPIQHQQV

XP_008439936.1 PREDICTED: transcription factor bHLH112-like isoform X2 [Cucumis melo]8.1e-0962.3Show/hide
Query:  EEKLGDRVTALQQLVSPFGK--------------------VLSTPYMKNNNGITPIQHQQV
        +EKLGDRVTALQQLVSPFGK                    VLSTPYMKN+NGITP+QHQQV
Subjt:  EEKLGDRVTALQQLVSPFGK--------------------VLSTPYMKNNNGITPIQHQQV

XP_011658178.1 transcription factor bHLH112 isoform X2 [Cucumis sativus]8.1e-0962.3Show/hide
Query:  EEKLGDRVTALQQLVSPFGK--------------------VLSTPYMKNNNGITPIQHQQV
        +EKLGDRVTALQQLVSPFGK                    VLSTPYMK+NNGITP+QHQQV
Subjt:  EEKLGDRVTALQQLVSPFGK--------------------VLSTPYMKNNNGITPIQHQQV

XP_022977366.1 transcription factor bHLH112-like [Cucurbita maxima]8.1e-0960.32Show/hide
Query:  EEKLGDRVTALQQLVSPFGK----------------------VLSTPYMKNNNGITPIQHQQV
        +EKLGDRVTALQQLVSPFGK                      +LSTPYMKNNNGITP+QHQQV
Subjt:  EEKLGDRVTALQQLVSPFGK----------------------VLSTPYMKNNNGITPIQHQQV

XP_023544490.1 transcription factor bHLH112-like isoform X1 [Cucurbita pepo subsp. pepo]6.2e-0961.9Show/hide
Query:  EEKLGDRVTALQQLVSPFGK----------------------VLSTPYMKNNNGITPIQHQQV
        +EKLGDRVTALQQLVSPFGK                      +LSTPYMKNNNGITPIQHQQV
Subjt:  EEKLGDRVTALQQLVSPFGK----------------------VLSTPYMKNNNGITPIQHQQV

TrEMBL top hitse value%identityAlignment
A0A0A0KHH2 BHLH domain-containing protein6.7e-0960.32Show/hide
Query:  EEKLGDRVTALQQLVSPFGK----------------------VLSTPYMKNNNGITPIQHQQV
        +EKLGDRVTALQQLVSPFGK                      VLSTPYMK+NNGITP+QHQQV
Subjt:  EEKLGDRVTALQQLVSPFGK----------------------VLSTPYMKNNNGITPIQHQQV

A0A1S3AZZ2 transcription factor bHLH112-like isoform X23.9e-0962.3Show/hide
Query:  EEKLGDRVTALQQLVSPFGK--------------------VLSTPYMKNNNGITPIQHQQV
        +EKLGDRVTALQQLVSPFGK                    VLSTPYMKN+NGITP+QHQQV
Subjt:  EEKLGDRVTALQQLVSPFGK--------------------VLSTPYMKNNNGITPIQHQQV

A0A5A7UBZ4 Transcription factor bHLH112-like isoform X16.7e-0960.32Show/hide
Query:  EEKLGDRVTALQQLVSPFGK----------------------VLSTPYMKNNNGITPIQHQQV
        +EKLGDRVTALQQLVSPFGK                      VLSTPYMKN+NGITP+QHQQV
Subjt:  EEKLGDRVTALQQLVSPFGK----------------------VLSTPYMKNNNGITPIQHQQV

A0A5D3CNF2 Transcription factor bHLH112-like isoform X16.7e-0960.32Show/hide
Query:  EEKLGDRVTALQQLVSPFGK----------------------VLSTPYMKNNNGITPIQHQQV
        +EKLGDRVTALQQLVSPFGK                      VLSTPYMKN+NGITP+QHQQV
Subjt:  EEKLGDRVTALQQLVSPFGK----------------------VLSTPYMKNNNGITPIQHQQV

A0A6J1IJP7 transcription factor bHLH112-like3.9e-0960.32Show/hide
Query:  EEKLGDRVTALQQLVSPFGK----------------------VLSTPYMKNNNGITPIQHQQV
        +EKLGDRVTALQQLVSPFGK                      +LSTPYMKNNNGITP+QHQQV
Subjt:  EEKLGDRVTALQQLVSPFGK----------------------VLSTPYMKNNNGITPIQHQQV

SwissProt top hitse value%identityAlignment
Q8GXT3 Transcription factor bHLH1237.4e-0542.62Show/hide
Query:  EEKLGDRVTALQQLVSPFGKVLSTPYMKNNNGITPIQHQQVKTM--PRALFGADFKHIPSD
        +EK+GDR+ ALQQLVSPFGK  +   +          HQQV  +  P    GA  +H  SD
Subjt:  EEKLGDRVTALQQLVSPFGKVLSTPYMKNNNGITPIQHQQVKTM--PRALFGADFKHIPSD

Arabidopsis top hitse value%identityAlignment
AT1G27660.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.7e-0445.45Show/hide
Query:  EEKLGDRVTALQQLVSPFGKVLSTPYMKNNNGITPIQHQQVKTM
        +EKLGDR+ ALQQLVSPFGK  +   +    G       Q++T+
Subjt:  EEKLGDRVTALQQLVSPFGKVLSTPYMKNNNGITPIQHQQVKTM

AT2G20100.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.9e-0438Show/hide
Query:  EEKLGDRVTALQQLVSPFGKVLSTPYMKNNNGITPIQHQQVKTMPRALFG
        +EKLG R+ +L QLVSPFGK  +   +    G     H Q++ +    FG
Subjt:  EEKLGDRVTALQQLVSPFGKVLSTPYMKNNNGITPIQHQQVKTMPRALFG

AT2G20100.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.9e-0438Show/hide
Query:  EEKLGDRVTALQQLVSPFGKVLSTPYMKNNNGITPIQHQQVKTMPRALFG
        +EKLG R+ +L QLVSPFGK  +   +    G     H Q++ +    FG
Subjt:  EEKLGDRVTALQQLVSPFGKVLSTPYMKNNNGITPIQHQQVKTMPRALFG

AT3G20640.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein5.3e-0642.62Show/hide
Query:  EEKLGDRVTALQQLVSPFGKVLSTPYMKNNNGITPIQHQQVKTM--PRALFGADFKHIPSD
        +EK+GDR+ ALQQLVSPFGK  +   +          HQQV  +  P    GA  +H  SD
Subjt:  EEKLGDRVTALQQLVSPFGKVLSTPYMKNNNGITPIQHQQVKTM--PRALFGADFKHIPSD

AT4G05170.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.9e-0490Show/hide
Query:  EEKLGDRVTALQQLVSPFGK
        +EKLGDR+TALQQLVSPFGK
Subjt:  EEKLGDRVTALQQLVSPFGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTGCAATCAGGTGCGGAAGAGAAGCTAGGGGACCGAGTCACTGCCCTTCAACAACTGGTTTCACCGTTTGGAAAGGTCTTAAGTACTCCATACATGAAGAACAA
CAACGGAATAACACCCATCCAACACCAACAGGTAAAAACTATGCCGAGGGCTTTGTTTGGTGCCGATTTCAAGCACATTCCCAGTGACAAACGCAACGACGGCGGATTTC
TGGACCCCGATGTTCGGCGGAACATTCCGGTGAAGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTGCAATCAGGTGCGGAAGAGAAGCTAGGGGACCGAGTCACTGCCCTTCAACAACTGGTTTCACCGTTTGGAAAGGTCTTAAGTACTCCATACATGAAGAACAA
CAACGGAATAACACCCATCCAACACCAACAGGTAAAAACTATGCCGAGGGCTTTGTTTGGTGCCGATTTCAAGCACATTCCCAGTGACAAACGCAACGACGGCGGATTTC
TGGACCCCGATGTTCGGCGGAACATTCCGGTGAAGAAATGA
Protein sequenceShow/hide protein sequence
MVLQSGAEEKLGDRVTALQQLVSPFGKVLSTPYMKNNNGITPIQHQQVKTMPRALFGADFKHIPSDKRNDGGFLDPDVRRNIPVKK