; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg008934 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008934
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold5:24573137..24581957
RNA-Seq ExpressionSpg008934
SyntenySpg008934
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025724.1 uncharacterized protein E6C27_scaffold653G00030 [Cucumis melo var. makuwa]2.7e-1327.69Show/hide
Query:  ESRARSLKLDEIIKGPQTPKEVSEVGSTSIGCLVSHVADDLLAPIQELSSFDLAK------DENLGKQAALTLWESKHQKIIQIPFDKIPRLEQETVKIL
        E  ++ +   E +   +  K      + SI  LV+  +   +   + +++F+++         +L ++ A+TL ES  QKII  PF+++  L+ E  KI 
Subjt:  ESRARSLKLDEIIKGPQTPKEVSEVGSTSIGCLVSHVADDLLAPIQELSSFDLAK------DENLGKQAALTLWESKHQKIIQIPFDKIPRLEQETVKIL

Query:  HAISKTRAPGLDPLKEILE---------------------------ETQFSLEKILYSESELLTAKGSLQQQHLQALREEEELEARLEVVKAKRGEISKS
         AI+ + +  L  LKE+++                           ET+  ++ +   E+ +L    ++Q++  +   +E +LEA+L+VV+ +  ++S  
Subjt:  HAISKTRAPGLDPLKEILE---------------------------ETQFSLEKILYSESELLTAKGSLQQQHLQALREEEELEARLEVVKAKRGEISKS

Query:  IVENEDLLKQHQLEASKLQGTIGSIEDALVLTDANAKTLTILCGMLEDAQEELKNYKWIP
        I +NE  LKQ Q E SK    I  ++ AL++ DA+AK L+ L   LE+  EELKN KW P
Subjt:  IVENEDLLKQHQLEASKLQGTIGSIEDALVLTDANAKTLTILCGMLEDAQEELKNYKWIP

KAA0034815.1 hypothetical protein E6C27_scaffold213G00490 [Cucumis melo var. makuwa]2.0e-1330.11Show/hide
Query:  NLGKQAALTLWESKHQKIIQIPFDKIPRLEQETVKILHAISKTRAPGLDPLKEI--------LEETQFSLEKILYSESELLTAKGSLQQQHLQALREEEE
        N  ++ AL +WE    KI++ PF+ IPRL  E   +L  I K  A GL  L  +        L E   ++++ L    +L      +Q++  +   E +E
Subjt:  NLGKQAALTLWESKHQKIIQIPFDKIPRLEQETVKILHAISKTRAPGLDPLKEI--------LEETQFSLEKILYSESELLTAKGSLQQQHLQALREEEE

Query:  LEARLEVVKAKRGEISKSIVENEDLLKQHQLEASKLQGTIGSIEDALVLTDANAKTLTILCGMLEDAQEELKNYKW
        LE RL  + A+  ++S    E  + + Q +LE +K Q  + ++E    +T+   + LT +C  +E A+EE KN+KW
Subjt:  LEARLEVVKAKRGEISKSIVENEDLLKQHQLEASKLQGTIGSIEDALVLTDANAKTLTILCGMLEDAQEELKNYKW

KAA0043403.1 hypothetical protein E6C27_scaffold1639G00020 [Cucumis melo var. makuwa]6.0e-1328.28Show/hide
Query:  NLGKQAALTLWESKHQKIIQIPFDKIPRLEQETVKILHAISKTRAPGLDPLKEILE------------ETQFSLEKILYSESELLTAKGS----------
        N  K+  L +W+    KIIQ PF+ IPRL  E   +L  I K  A GL PL+E L             ++ +S + +   ++  L  K S          
Subjt:  NLGKQAALTLWESKHQKIIQIPFDKIPRLEQETVKILHAISKTRAPGLDPLKEILE------------ETQFSLEKILYSESELLTAKGS----------

Query:  --------LQQQHLQALREEEELEARLEVVKAKRGEISKSIVENEDLLKQHQLEASKLQGTIGSIEDALVLTDANAKTLTILCGMLEDAQEELKNYKW
                +Q++ ++   E++EL+ RL+ + A+  ++S    E  + + Q +LE  KLQ  + ++E    +T+   + L  +C  +E A+EE KN KW
Subjt:  --------LQQQHLQALREEEELEARLEVVKAKRGEISKSIVENEDLLKQHQLEASKLQGTIGSIEDALVLTDANAKTLTILCGMLEDAQEELKNYKW

TYK06155.1 uncharacterized protein E5676_scaffold287G00030 [Cucumis melo var. makuwa]1.6e-1327.69Show/hide
Query:  ESRARSLKLDEIIKGPQTPKEVSEVGSTSIGCLVSHVADDLLAPIQELSSFDLAK------DENLGKQAALTLWESKHQKIIQIPFDKIPRLEQETVKIL
        E  ++ +   E +   +  K      + SI  LV+  +   +   + +++F+++         +L ++ A+TL ES  QKII+ PF+++  L+ E  KI 
Subjt:  ESRARSLKLDEIIKGPQTPKEVSEVGSTSIGCLVSHVADDLLAPIQELSSFDLAK------DENLGKQAALTLWESKHQKIIQIPFDKIPRLEQETVKIL

Query:  HAISKTRAPGLDPLKEILE---------------------------ETQFSLEKILYSESELLTAKGSLQQQHLQALREEEELEARLEVVKAKRGEISKS
         AI+ + +  L  LKE+++                           ET+  ++ +   E+ +L    ++Q++  +   +E +LEA+L+VV+ +  ++S  
Subjt:  HAISKTRAPGLDPLKEILE---------------------------ETQFSLEKILYSESELLTAKGSLQQQHLQALREEEELEARLEVVKAKRGEISKS

Query:  IVENEDLLKQHQLEASKLQGTIGSIEDALVLTDANAKTLTILCGMLEDAQEELKNYKWIP
        I +NE  LKQ Q E SK    I  ++ AL++ DA+AK L  L   LE+  EELKN KW P
Subjt:  IVENEDLLKQHQLEASKLQGTIGSIEDALVLTDANAKTLTILCGMLEDAQEELKNYKWIP

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]4.9e-1529.63Show/hide
Query:  IIKGPQTPKEVSEVGSTSIGCLVSHVADDLLAPIQELSSFDLAKDENLGKQAALTLWESKHQKIIQIPFDKIPRLEQETVKILHAISKTRAPGLDPLKEI
        +IKGP  P++V      ++  +    AD L++              +L +QAA+TLWE+  QKII+ PF+++  LE E  KI  AI+ + +  L  L+E+
Subjt:  IIKGPQTPKEVSEVGSTSIGCLVSHVADDLLAPIQELSSFDLAKDENLGKQAALTLWESKHQKIIQIPFDKIPRLEQETVKILHAISKTRAPGLDPLKEI

Query:  ---------------------------LEETQFSLEKILYSESELLTAKGSLQQQHLQALREEEELEARLEVVKAKRGEISKSIVENEDLLKQHQLEASK
                                   L E +  ++ +   E+ +L    + +++  +   +E +LEA+L++V+A+  ++S  I +N+  LKQ Q E SK
Subjt:  ---------------------------LEETQFSLEKILYSESELLTAKGSLQQQHLQALREEEELEARLEVVKAKRGEISKSIVENEDLLKQHQLEASK

Query:  LQGTIGSIEDALVLTDANAKTLTILCGMLEDAQEELKNYKWIP
            I  +E A ++ D +AK L+ L   LE   EELKN+KW P
Subjt:  LQGTIGSIEDALVLTDANAKTLTILCGMLEDAQEELKNYKWIP

TrEMBL top hitse value%identityAlignment
A0A5A7SIG6 PMD domain-containing protein1.1e-1231.28Show/hide
Query:  NLGKQAALTLWESKHQKIIQIPFDKIPRLEQETVKILHAISKTRAPGLDPLKEILEE-----TQFSLEKILYSESELLTAKGSLQQQHLQALR------E
        N  ++ AL +WE    KI++ PF+ IPRL  E   +L  I K  A GL PL+E L         F+  +  YS   L T K     +   A+       E
Subjt:  NLGKQAALTLWESKHQKIIQIPFDKIPRLEQETVKILHAISKTRAPGLDPLKEILEE-----TQFSLEKILYSESELLTAKGSLQQQHLQALR------E

Query:  EEELEARLEVVKAKRGEISKSIVENEDLLKQHQLEASKLQGTIGSIEDALVLTDANAKTLTILCGMLEDAQEELKNYKW
        ++ELE RL+ +  +  ++S    E  + + Q +L+ +KLQ  + ++E    +T+   + L  +   +E AQEE KN+KW
Subjt:  EEELEARLEVVKAKRGEISKSIVENEDLLKQHQLEASKLQGTIGSIEDALVLTDANAKTLTILCGMLEDAQEELKNYKW

A0A5A7SJ85 Uncharacterized protein1.3e-1327.69Show/hide
Query:  ESRARSLKLDEIIKGPQTPKEVSEVGSTSIGCLVSHVADDLLAPIQELSSFDLAK------DENLGKQAALTLWESKHQKIIQIPFDKIPRLEQETVKIL
        E  ++ +   E +   +  K      + SI  LV+  +   +   + +++F+++         +L ++ A+TL ES  QKII  PF+++  L+ E  KI 
Subjt:  ESRARSLKLDEIIKGPQTPKEVSEVGSTSIGCLVSHVADDLLAPIQELSSFDLAK------DENLGKQAALTLWESKHQKIIQIPFDKIPRLEQETVKIL

Query:  HAISKTRAPGLDPLKEILE---------------------------ETQFSLEKILYSESELLTAKGSLQQQHLQALREEEELEARLEVVKAKRGEISKS
         AI+ + +  L  LKE+++                           ET+  ++ +   E+ +L    ++Q++  +   +E +LEA+L+VV+ +  ++S  
Subjt:  HAISKTRAPGLDPLKEILE---------------------------ETQFSLEKILYSESELLTAKGSLQQQHLQALREEEELEARLEVVKAKRGEISKS

Query:  IVENEDLLKQHQLEASKLQGTIGSIEDALVLTDANAKTLTILCGMLEDAQEELKNYKWIP
        I +NE  LKQ Q E SK    I  ++ AL++ DA+AK L+ L   LE+  EELKN KW P
Subjt:  IVENEDLLKQHQLEASKLQGTIGSIEDALVLTDANAKTLTILCGMLEDAQEELKNYKWIP

A0A5A7T019 PMD domain-containing protein9.9e-1430.11Show/hide
Query:  NLGKQAALTLWESKHQKIIQIPFDKIPRLEQETVKILHAISKTRAPGLDPLKEI--------LEETQFSLEKILYSESELLTAKGSLQQQHLQALREEEE
        N  ++ AL +WE    KI++ PF+ IPRL  E   +L  I K  A GL  L  +        L E   ++++ L    +L      +Q++  +   E +E
Subjt:  NLGKQAALTLWESKHQKIIQIPFDKIPRLEQETVKILHAISKTRAPGLDPLKEI--------LEETQFSLEKILYSESELLTAKGSLQQQHLQALREEEE

Query:  LEARLEVVKAKRGEISKSIVENEDLLKQHQLEASKLQGTIGSIEDALVLTDANAKTLTILCGMLEDAQEELKNYKW
        LE RL  + A+  ++S    E  + + Q +LE +K Q  + ++E    +T+   + LT +C  +E A+EE KN+KW
Subjt:  LEARLEVVKAKRGEISKSIVENEDLLKQHQLEASKLQGTIGSIEDALVLTDANAKTLTILCGMLEDAQEELKNYKW

A0A5A7TJ15 Uncharacterized protein2.9e-1328.28Show/hide
Query:  NLGKQAALTLWESKHQKIIQIPFDKIPRLEQETVKILHAISKTRAPGLDPLKEILE------------ETQFSLEKILYSESELLTAKGS----------
        N  K+  L +W+    KIIQ PF+ IPRL  E   +L  I K  A GL PL+E L             ++ +S + +   ++  L  K S          
Subjt:  NLGKQAALTLWESKHQKIIQIPFDKIPRLEQETVKILHAISKTRAPGLDPLKEILE------------ETQFSLEKILYSESELLTAKGS----------

Query:  --------LQQQHLQALREEEELEARLEVVKAKRGEISKSIVENEDLLKQHQLEASKLQGTIGSIEDALVLTDANAKTLTILCGMLEDAQEELKNYKW
                +Q++ ++   E++EL+ RL+ + A+  ++S    E  + + Q +LE  KLQ  + ++E    +T+   + L  +C  +E A+EE KN KW
Subjt:  --------LQQQHLQALREEEELEARLEVVKAKRGEISKSIVENEDLLKQHQLEASKLQGTIGSIEDALVLTDANAKTLTILCGMLEDAQEELKNYKW

A0A5D3C453 Uncharacterized protein7.6e-1427.69Show/hide
Query:  ESRARSLKLDEIIKGPQTPKEVSEVGSTSIGCLVSHVADDLLAPIQELSSFDLAK------DENLGKQAALTLWESKHQKIIQIPFDKIPRLEQETVKIL
        E  ++ +   E +   +  K      + SI  LV+  +   +   + +++F+++         +L ++ A+TL ES  QKII+ PF+++  L+ E  KI 
Subjt:  ESRARSLKLDEIIKGPQTPKEVSEVGSTSIGCLVSHVADDLLAPIQELSSFDLAK------DENLGKQAALTLWESKHQKIIQIPFDKIPRLEQETVKIL

Query:  HAISKTRAPGLDPLKEILE---------------------------ETQFSLEKILYSESELLTAKGSLQQQHLQALREEEELEARLEVVKAKRGEISKS
         AI+ + +  L  LKE+++                           ET+  ++ +   E+ +L    ++Q++  +   +E +LEA+L+VV+ +  ++S  
Subjt:  HAISKTRAPGLDPLKEILE---------------------------ETQFSLEKILYSESELLTAKGSLQQQHLQALREEEELEARLEVVKAKRGEISKS

Query:  IVENEDLLKQHQLEASKLQGTIGSIEDALVLTDANAKTLTILCGMLEDAQEELKNYKWIP
        I +NE  LKQ Q E SK    I  ++ AL++ DA+AK L  L   LE+  EELKN KW P
Subjt:  IVENEDLLKQHQLEASKLQGTIGSIEDALVLTDANAKTLTILCGMLEDAQEELKNYKWIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGATCCTCCTGGGGTGAGATTTGAACTTGATCCAGAGATTGAACAGACATTCAGAAGGAGAAGGAGAGAGCAGCAAAGGAATATCAATCCGTTGGATAACCTGCC
GCTTCTTCCAAATATTCCAGAAGATCAAGTTGATCCCCAGCGGAACCGAAATTGTTATTTTGAGCTAGTACGACAATTTGGAGTTGATCGGGTGTTCGGGATGCAAAATG
ATGTCAAAGAACCGAAAAGAACCAAGTTGGAAGCTTTTAGAAGTGGGCTTGACCGAGAGCTAGCGGAATCTGTGCCTGAAGAACCAACACCATCTTCCAATTTTTCAACT
TCAAGTTATACCTCTTTAAAAGAACATTCTTCCTTAAAAAGCTTAGTTCAAAAATATATTGAGGAGTCTAGAGCAAGGAGTCTAAAATTAGATGAAATTATAAAAGGACC
TCAGACCCCAAAGGAAGTTAGTGAGGTGGGATCCACTTCCATAGGATGTCTAGTGAGTCATGTGGCTGATGATTTATTGGCACCCATTCAGGAGCTTAGTTCTTTCGATC
TTGCTAAGGATGAGAATTTAGGGAAACAGGCCGCCCTTACCCTGTGGGAGAGCAAACACCAGAAGATCATACAGATTCCATTCGACAAAATACCTCGTCTTGAACAAGAG
ACAGTCAAAATACTTCATGCAATTTCTAAGACTCGTGCACCCGGCTTGGATCCTCTTAAAGAAATTTTGGAAGAGACTCAGTTTAGTTTGGAGAAGATACTATACAGTGA
AAGTGAACTACTCACAGCGAAAGGTTCACTTCAGCAACAACATTTGCAAGCATTGCGAGAAGAAGAAGAATTGGAAGCTAGGCTTGAAGTTGTGAAAGCTAAGCGAGGTG
AGATTTCTAAGTCGATTGTCGAGAATGAGGATCTCTTAAAACAACATCAACTCGAGGCTTCCAAACTGCAAGGAACTATAGGTAGTATTGAAGATGCCCTTGTTCTTACT
GATGCTAATGCTAAAACTCTGACGATACTTTGTGGAATGTTGGAAGATGCACAAGAAGAGCTGAAGAACTACAAGTGGATACCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGATCCTCCTGGGGTGAGATTTGAACTTGATCCAGAGATTGAACAGACATTCAGAAGGAGAAGGAGAGAGCAGCAAAGGAATATCAATCCGTTGGATAACCTGCC
GCTTCTTCCAAATATTCCAGAAGATCAAGTTGATCCCCAGCGGAACCGAAATTGTTATTTTGAGCTAGTACGACAATTTGGAGTTGATCGGGTGTTCGGGATGCAAAATG
ATGTCAAAGAACCGAAAAGAACCAAGTTGGAAGCTTTTAGAAGTGGGCTTGACCGAGAGCTAGCGGAATCTGTGCCTGAAGAACCAACACCATCTTCCAATTTTTCAACT
TCAAGTTATACCTCTTTAAAAGAACATTCTTCCTTAAAAAGCTTAGTTCAAAAATATATTGAGGAGTCTAGAGCAAGGAGTCTAAAATTAGATGAAATTATAAAAGGACC
TCAGACCCCAAAGGAAGTTAGTGAGGTGGGATCCACTTCCATAGGATGTCTAGTGAGTCATGTGGCTGATGATTTATTGGCACCCATTCAGGAGCTTAGTTCTTTCGATC
TTGCTAAGGATGAGAATTTAGGGAAACAGGCCGCCCTTACCCTGTGGGAGAGCAAACACCAGAAGATCATACAGATTCCATTCGACAAAATACCTCGTCTTGAACAAGAG
ACAGTCAAAATACTTCATGCAATTTCTAAGACTCGTGCACCCGGCTTGGATCCTCTTAAAGAAATTTTGGAAGAGACTCAGTTTAGTTTGGAGAAGATACTATACAGTGA
AAGTGAACTACTCACAGCGAAAGGTTCACTTCAGCAACAACATTTGCAAGCATTGCGAGAAGAAGAAGAATTGGAAGCTAGGCTTGAAGTTGTGAAAGCTAAGCGAGGTG
AGATTTCTAAGTCGATTGTCGAGAATGAGGATCTCTTAAAACAACATCAACTCGAGGCTTCCAAACTGCAAGGAACTATAGGTAGTATTGAAGATGCCCTTGTTCTTACT
GATGCTAATGCTAAAACTCTGACGATACTTTGTGGAATGTTGGAAGATGCACAAGAAGAGCTGAAGAACTACAAGTGGATACCGTGA
Protein sequenceShow/hide protein sequence
MSDPPGVRFELDPEIEQTFRRRRREQQRNINPLDNLPLLPNIPEDQVDPQRNRNCYFELVRQFGVDRVFGMQNDVKEPKRTKLEAFRSGLDRELAESVPEEPTPSSNFST
SSYTSLKEHSSLKSLVQKYIEESRARSLKLDEIIKGPQTPKEVSEVGSTSIGCLVSHVADDLLAPIQELSSFDLAKDENLGKQAALTLWESKHQKIIQIPFDKIPRLEQE
TVKILHAISKTRAPGLDPLKEILEETQFSLEKILYSESELLTAKGSLQQQHLQALREEEELEARLEVVKAKRGEISKSIVENEDLLKQHQLEASKLQGTIGSIEDALVLT
DANAKTLTILCGMLEDAQEELKNYKWIP