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Spg008950 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008950
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA ligase
Genome locationscaffold11:11122779..11123950
RNA-Seq ExpressionSpg008950
SyntenySpg008950
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053852.1 hypothetical protein E6C27_scaffold135G002430 [Cucumis melo var. makuwa]2.5e-2472.83Show/hide
Query:  TFLLLFLGFSFLISSS---AVPTTRILKSTFD-HPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQGRMVLENNDYPGTGANNHHDPKSPAKP
        TF LLFL FSFL+SSS   AVPTTRILKSTF+ HPS Q  V +DV DLE+  GDSF    ERLF+GR++LENNDYPGTGANNHHDPKSPA+P
Subjt:  TFLLLFLGFSFLISSS---AVPTTRILKSTFD-HPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQGRMVLENNDYPGTGANNHHDPKSPAKP

KAG6580910.1 hypothetical protein SDJN03_20912, partial [Cucurbita argyrosperma subsp. sororia]7.9e-2672.45Show/hide
Query:  MAQKTLLSL-TFLLLFLGFSFLISSSAVPTTRILKSTFDHPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQGRMVLENNDYPGTGANNHHDPKSPAKP
        M QK  LSL   LLLFLGFS L+SS AVPTTRI KSTFD PSAQDFVFQDV DLE +GGD F         GR VLENNDYPGTGANNHHDP +PAKP
Subjt:  MAQKTLLSL-TFLLLFLGFSFLISSSAVPTTRILKSTFDHPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQGRMVLENNDYPGTGANNHHDPKSPAKP

KAG6596972.1 hypothetical protein SDJN03_10152, partial [Cucurbita argyrosperma subsp. sororia]5.8e-2973.68Show/hide
Query:  MAQKTLLSLTFLLLFLGFSFLISSSAVPTTRILKSTFDHPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQGRMVLENNDYPGTGANNHHDPKSPA
        M  K LL LTFLLLFL F+FLISS+AVPTTR+L+S FD PSAQ  VFQD  DLE+ G DS + V+ERL +GR+VLENNDYPGTGANNHHDPKSPA
Subjt:  MAQKTLLSLTFLLLFLGFSFLISSSAVPTTRILKSTFDHPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQGRMVLENNDYPGTGANNHHDPKSPA

KAG7017658.1 hypothetical protein SDJN02_19524 [Cucurbita argyrosperma subsp. argyrosperma]4.6e-2672.45Show/hide
Query:  MAQKTLLSL-TFLLLFLGFSFLISSSAVPTTRILKSTFDHPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQGRMVLENNDYPGTGANNHHDPKSPAKP
        M QK  LSL   LLLFLGFS L+SS AVPTTRI KSTFD PSAQDFVFQDV DLE +GGD F         GR+VLENNDYPGTGANNHHDP +PAKP
Subjt:  MAQKTLLSL-TFLLLFLGFSFLISSSAVPTTRILKSTFDHPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQGRMVLENNDYPGTGANNHHDPKSPAKP

KGN59481.1 hypothetical protein Csa_001422 [Cucumis sativus]2.7e-2674.73Show/hide
Query:  TFLLLFLGFSFLISSS---AVPTTRILKSTFDHPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQGRMVLENNDYPGTGANNHHDPKSPAKP
        TF LLFL FSFL+SS+   AVPTTRILKSTFDHPS Q  V QDV D+E+  GDSF    ERLF+GR++LENNDYPGTGANNHHDPKSPAKP
Subjt:  TFLLLFLGFSFLISSS---AVPTTRILKSTFDHPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQGRMVLENNDYPGTGANNHHDPKSPAKP

TrEMBL top hitse value%identityAlignment
A0A0A0LHJ0 Uncharacterized protein1.3e-2674.73Show/hide
Query:  TFLLLFLGFSFLISSS---AVPTTRILKSTFDHPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQGRMVLENNDYPGTGANNHHDPKSPAKP
        TF LLFL FSFL+SS+   AVPTTRILKSTFDHPS Q  V QDV D+E+  GDSF    ERLF+GR++LENNDYPGTGANNHHDPKSPAKP
Subjt:  TFLLLFLGFSFLISSS---AVPTTRILKSTFDHPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQGRMVLENNDYPGTGANNHHDPKSPAKP

A0A5A7UDI6 Uncharacterized protein1.2e-2472.83Show/hide
Query:  TFLLLFLGFSFLISSS---AVPTTRILKSTFD-HPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQGRMVLENNDYPGTGANNHHDPKSPAKP
        TF LLFL FSFL+SSS   AVPTTRILKSTF+ HPS Q  V +DV DLE+  GDSF    ERLF+GR++LENNDYPGTGANNHHDPKSPA+P
Subjt:  TFLLLFLGFSFLISSS---AVPTTRILKSTFD-HPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQGRMVLENNDYPGTGANNHHDPKSPAKP

A0A5B6ZB32 Uncharacterized protein (Fragment)7.7e-1953.64Show/hide
Query:  SPLCRSILFVSQENMAQKTLLSLTFLLLFLGFSFLISSSAVPTTRILKSTFDHPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQGRMVLENNDYPGTGAN
        S LC   +F    NM  K  L L  L+LFLGF F++SS+AVPT+R LKS    P+AQD   Q V D+  DG    +L+EER  +GRM +E+NDYPGTGAN
Subjt:  SPLCRSILFVSQENMAQKTLLSLTFLLLFLGFSFLISSSAVPTTRILKSTFDHPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQGRMVLENNDYPGTGAN

Query:  NHHDPKSPAK
        NHHDPK+P +
Subjt:  NHHDPKSPAK

A0A6A6KJS2 Uncharacterized protein1.1e-1758.76Show/hide
Query:  MAQKTLLSLTFLLLFLGFSFLISSSAVPTTRILKSTFDHPSA-QDFVFQDVGDLEMDGGDSFDLVEERLFQGRMVLENNDYPGTGANNHHDPKSPAK
        M  K  LS+  LLLFLGFSF++SS AVP+TR LKST ++PS+ QDF+ QD  DL +      DL  E    GRM LEN DYPGTGANNHHDPK+P +
Subjt:  MAQKTLLSLTFLLLFLGFSFLISSSAVPTTRILKSTFDHPSA-QDFVFQDVGDLEMDGGDSFDLVEERLFQGRMVLENNDYPGTGANNHHDPKSPAK

A0A6P3YVB6 uncharacterized protein LOC1074052461.1e-1755.67Show/hide
Query:  MAQKTLLSLTFLLLFLGFSFLISSSAVPTTRILKSTF-DHPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQGRMVLENNDYPGTGANNHHDPKSPAK
        M QK LL+L  +LL LGFS  + SSA+PTTR+LKST  D  S Q  + Q    LE DG + F++ EE  ++GRMV+EN DYPGTGANNHHDP++P +
Subjt:  MAQKTLLSLTFLLLFLGFSFLISSSAVPTTRILKSTF-DHPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQGRMVLENNDYPGTGANNHHDPKSPAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTTTCTTGCCAAACTACAATCCCTTCCCCTTTGTGCAGATCTATTCTGTTTGTTTCCCAAGAAAACATGGCTCAGAAAACTCTTCTCTCCCTCACCTTCCTGCT
TCTCTTTCTGGGTTTCTCCTTTCTCATTTCTTCTTCTGCTGTTCCCACTACAAGAATCCTCAAATCAACTTTTGATCACCCATCTGCTCAAGATTTTGTTTTTCAGGATG
TAGGAGATTTGGAGATGGACGGTGGAGATTCATTTGATTTGGTGGAGGAAAGATTGTTTCAAGGAAGGATGGTTTTGGAGAACAATGACTATCCTGGCACAGGGGCAAAC
AATCACCATGATCCAAAGTCTCCTGCAAAACCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTTTCTTGCCAAACTACAATCCCTTCCCCTTTGTGCAGATCTATTCTGTTTGTTTCCCAAGAAAACATGGCTCAGAAAACTCTTCTCTCCCTCACCTTCCTGCT
TCTCTTTCTGGGTTTCTCCTTTCTCATTTCTTCTTCTGCTGTTCCCACTACAAGAATCCTCAAATCAACTTTTGATCACCCATCTGCTCAAGATTTTGTTTTTCAGGATG
TAGGAGATTTGGAGATGGACGGTGGAGATTCATTTGATTTGGTGGAGGAAAGATTGTTTCAAGGAAGGATGGTTTTGGAGAACAATGACTATCCTGGCACAGGGGCAAAC
AATCACCATGATCCAAAGTCTCCTGCAAAACCTTAA
Protein sequenceShow/hide protein sequence
MGFSCQTTIPSPLCRSILFVSQENMAQKTLLSLTFLLLFLGFSFLISSSAVPTTRILKSTFDHPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQGRMVLENNDYPGTGAN
NHHDPKSPAKP