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Spg008953 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg008953
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionFanconi-associated nuclease
Genome locationscaffold11:10922101..10923395
RNA-Seq ExpressionSpg008953
SyntenySpg008953
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2048685.1 hypothetical protein ES319_A13G128000v1 [Gossypium barbadense]2.6e-0528.83Show/hide
Query:  ERGFS------CTLPQTMIDQISQRKWETVCENPRSYASALVHDFYRTQWQEEVDEVLVRGHAVAFSSACINNVYELRDIPNAEGNALLDCLDDDFLSAI
        E+GF+        +P  +  +I+  KWE  C+        LV +FY +   ++  EV+VR   V  +S  IN+++ L D+   E   +++ ++ DFL  +
Subjt:  ERGFS------CTLPQTMIDQISQRKWETVCENPRSYASALVHDFYRTQWQEEVDEVLVRGHAVAFSSACINNVYELRDIPNAEGNALLDCLDDDFLSAI

Query:  LLAVARPGAKW
        L  V  PG++W
Subjt:  LLAVARPGAKW

KAF4378427.1 hypothetical protein F8388_021621 [Cannabis sativa]6.3e-0733.04Show/hide
Query:  TLPQTMIDQISQRKWETVCENPRSYASALVHDFYRTQWQEE-VDEVLVRGHAVAFSSACINNVYELRDIPNAEGNALLDCLDDDFLSAILLAVARPGAKW
        ++P  +I+ I +RKWE +CE+P S    +V +FY      E   +++VR   V FS   IN  ++L++I   E +     L D  +  I+  + +PGA+W
Subjt:  TLPQTMIDQISQRKWETVCENPRSYASALVHDFYRTQWQEE-VDEVLVRGHAVAFSSACINNVYELRDIPNAEGNALLDCLDDDFLSAILLAVARPGAKW

Query:  --DGHGTTRTLKSQL
          D HG  R  +S L
Subjt:  --DGHGTTRTLKSQL

KAG4128712.1 hypothetical protein ERO13_D09G037250v2 [Gossypium hirsutum]4.5e-0528.83Show/hide
Query:  ERGFS------CTLPQTMIDQISQRKWETVCENPRSYASALVHDFYRTQWQEEVDEVLVRGHAVAFSSACINNVYELRDIPNAEGNALLDCLDDDFLSAI
        E+GF         +P T+  +I+  KWE  C+        LV +FY +   ++  EV+VR   V  +S  IN+++ L D+   +   +++ ++ DFL  +
Subjt:  ERGFS------CTLPQTMIDQISQRKWETVCENPRSYASALVHDFYRTQWQEEVDEVLVRGHAVAFSSACINNVYELRDIPNAEGNALLDCLDDDFLSAI

Query:  LLAVARPGAKW
        L  V  PG++W
Subjt:  LLAVARPGAKW

KAG4166144.1 hypothetical protein ERO13_A13G112550v2 [Gossypium hirsutum]3.5e-0528.83Show/hide
Query:  ERGFS------CTLPQTMIDQISQRKWETVCENPRSYASALVHDFYRTQWQEEVDEVLVRGHAVAFSSACINNVYELRDIPNAEGNALLDCLDDDFLSAI
        E+GF+        +P  +  +I+  KWE  C+        LV +FY +   ++  EV+VR   V  +S  IN+++ L D+   E   +++ ++ DFL  +
Subjt:  ERGFS------CTLPQTMIDQISQRKWETVCENPRSYASALVHDFYRTQWQEEVDEVLVRGHAVAFSSACINNVYELRDIPNAEGNALLDCLDDDFLSAI

Query:  LLAVARPGAKW
        L  V  PG++W
Subjt:  LLAVARPGAKW

XP_038898613.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120086174 [Benincasa hispida]3.6e-1034.51Show/hide
Query:  LPQTMIDQISQRKWETVCENPRSYASALVHDFYRTQWQEEVDEVLVRGHAVAFSSACINNVYELRDIPNAEGNALLDCLDDDFLSAILLAVARPGAKWD-
        LP  +   I +  W+T  + P      +VHDFYR    E  D V  +G  V FS+  IN +Y++RD P+A GN ++D   ++ +   L  +A+PG +W  
Subjt:  LPQTMIDQISQRKWETVCENPRSYASALVHDFYRTQWQEEVDEVLVRGHAVAFSSACINNVYELRDIPNAEGNALLDCLDDDFLSAILLAVARPGAKWD-

Query:  GHGTTRTLKSQLL
             RTL+S+ L
Subjt:  GHGTTRTLKSQLL

TrEMBL top hitse value%identityAlignment
A0A5D2DRB2 Uncharacterized protein1.1e-0428.57Show/hide
Query:  LPQTMIDQISQRKWETVCENPRSYASALVHDFYRTQWQEEVDEVLVRGHAVAFSSACINNVYELRDIPNAEGNALLDCLDDDFLSAILLAVARPGAKW
        +P  +  +I+  KWE  C+        LV +FY +   ++  EV+VR   V  +S  IN+++ L D+   E  ++++ ++ DFL  +L  V   G++W
Subjt:  LPQTMIDQISQRKWETVCENPRSYASALVHDFYRTQWQEEVDEVLVRGHAVAFSSACINNVYELRDIPNAEGNALLDCLDDDFLSAILLAVARPGAKW

A0A5J5QTS9 Uncharacterized protein8.3e-0525.93Show/hide
Query:  FQEERGFSCTLPQTMIDQISQRKWETVCENPRSYASALVHDFYRTQWQEEVDEVLVRGHAVAFSSACINNVYELRDIPNAEGNALLDCLDDDFLSAILLA
        F+ E      +P ++ ++I    W   C+        LV +FY      + +EV+VR   V  +S  I++++ L ++   E +A++  ++ DFL  +L  
Subjt:  FQEERGFSCTLPQTMIDQISQRKWETVCENPRSYASALVHDFYRTQWQEEVDEVLVRGHAVAFSSACINNVYELRDIPNAEGNALLDCLDDDFLSAILLA

Query:  VARPGAKW
        V+ PG++W
Subjt:  VARPGAKW

A0A5J5SRB5 Uncharacterized protein4.9e-0528.57Show/hide
Query:  LPQTMIDQISQRKWETVCENPRSYASALVHDFYRTQWQEEVDEVLVRGHAVAFSSACINNVYELRDIPNAEGNALLDCLDDDFLSAILLAVARPGAKW
        +P  +  +I+  KWE  C+        LV +FY +   ++  EV+VR   V  +S  IN+++ L D+   E  ++++ ++ DFL  +L  V   G++W
Subjt:  LPQTMIDQISQRKWETVCENPRSYASALVHDFYRTQWQEEVDEVLVRGHAVAFSSACINNVYELRDIPNAEGNALLDCLDDDFLSAILLAVARPGAKW

A0A5J5SYF7 Uncharacterized protein1.3e-0528.83Show/hide
Query:  ERGFS------CTLPQTMIDQISQRKWETVCENPRSYASALVHDFYRTQWQEEVDEVLVRGHAVAFSSACINNVYELRDIPNAEGNALLDCLDDDFLSAI
        E+GF+        +P  +  +I+  KWE  C+        LV +FY +   ++  EV+VR   V  +S  IN+++ L D+   E   +++ ++ DFL  +
Subjt:  ERGFS------CTLPQTMIDQISQRKWETVCENPRSYASALVHDFYRTQWQEEVDEVLVRGHAVAFSSACINNVYELRDIPNAEGNALLDCLDDDFLSAI

Query:  LLAVARPGAKW
        L  V  PG++W
Subjt:  LLAVARPGAKW

A0A7J6G6G2 Fanconi-associated nuclease3.0e-0733.04Show/hide
Query:  TLPQTMIDQISQRKWETVCENPRSYASALVHDFYRTQWQEE-VDEVLVRGHAVAFSSACINNVYELRDIPNAEGNALLDCLDDDFLSAILLAVARPGAKW
        ++P  +I+ I +RKWE +CE+P S    +V +FY      E   +++VR   V FS   IN  ++L++I   E +     L D  +  I+  + +PGA+W
Subjt:  TLPQTMIDQISQRKWETVCENPRSYASALVHDFYRTQWQEE-VDEVLVRGHAVAFSSACINNVYELRDIPNAEGNALLDCLDDDFLSAILLAVARPGAKW

Query:  --DGHGTTRTLKSQL
          D HG  R  +S L
Subjt:  --DGHGTTRTLKSQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTAACTCCCAAAACTTCTCAGTTGCTGGTTATGCGGACGATGCCTCTCCTTCATCGCCGGAGGTTGAAGGCCCTATCCGAGACACCATTTCCTCCCCTAGTGAGGA
AAATGAGAACCAAGCCGAAGCAGACCCCATGGAAACAGAAGAGCTCGAGGTCATCAACGTCGAACAAACTGCCATGGCCGAACCTTCCATTTCCGCAGCCAACCCCTCAG
AGCCCACTTCGCCGCAGTTTTCTGAGCAAGAAGTGGCCACATGGAACTCCCTGATGGGAGAATTTTGCGAGGAAGGCAAAGAAATTCATCTGCCAGAAGAACTAGAAAAG
GCTGCCGCAAAGGAAACTGAATGCAAGGCCGCCGCAGATGAAAAAACGGCCAAAGAAAGAGAAGGCACCAGCAAGCCAGCGCAAGATCCGGTCACCGCAGAAATTGCCGC
AACCAACTTAGCCATCATTGCGGCTGCGCTGGATGTAGAAGCTTCTGATTTCGAGGATGAGCTCCCCCTAACTCATCGCCGCAACATCCAGTTCGAAGGGGTAGTCATCC
GAGAACCCTCTGAAAAACCTGCGGCGGCCCCAAGCAAGAAAAGGAAAGCGCCCACCGCATCCAAAGGTAAAGGAAAAGAAAAAGTGGGCGCAGGAAAAGAAAAAGTAGGC
GCGGACTGGGGGAAGTTTCAAGAAGAACGAGGATTTAGCTGCACCCTCCCGCAAACAATGATAGATCAAATCTCCCAACGCAAGTGGGAAACAGTTTGCGAGAATCCCCG
CTCCTACGCCTCTGCGCTAGTCCACGACTTCTACCGGACACAGTGGCAAGAAGAAGTCGACGAAGTTTTAGTGAGAGGCCACGCAGTCGCATTCTCCTCAGCATGCATCA
ACAATGTGTACGAGCTGCGAGATATCCCAAACGCAGAAGGGAATGCGCTCCTCGACTGCCTCGACGATGACTTCCTGAGTGCAATACTTCTTGCGGTAGCCCGACCTGGA
GCCAAGTGGGACGGTCACGGCACGACGAGGACCCTGAAGTCGCAGCTGCTCGACTTTGAGGCTACCTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTAACTCCCAAAACTTCTCAGTTGCTGGTTATGCGGACGATGCCTCTCCTTCATCGCCGGAGGTTGAAGGCCCTATCCGAGACACCATTTCCTCCCCTAGTGAGGA
AAATGAGAACCAAGCCGAAGCAGACCCCATGGAAACAGAAGAGCTCGAGGTCATCAACGTCGAACAAACTGCCATGGCCGAACCTTCCATTTCCGCAGCCAACCCCTCAG
AGCCCACTTCGCCGCAGTTTTCTGAGCAAGAAGTGGCCACATGGAACTCCCTGATGGGAGAATTTTGCGAGGAAGGCAAAGAAATTCATCTGCCAGAAGAACTAGAAAAG
GCTGCCGCAAAGGAAACTGAATGCAAGGCCGCCGCAGATGAAAAAACGGCCAAAGAAAGAGAAGGCACCAGCAAGCCAGCGCAAGATCCGGTCACCGCAGAAATTGCCGC
AACCAACTTAGCCATCATTGCGGCTGCGCTGGATGTAGAAGCTTCTGATTTCGAGGATGAGCTCCCCCTAACTCATCGCCGCAACATCCAGTTCGAAGGGGTAGTCATCC
GAGAACCCTCTGAAAAACCTGCGGCGGCCCCAAGCAAGAAAAGGAAAGCGCCCACCGCATCCAAAGGTAAAGGAAAAGAAAAAGTGGGCGCAGGAAAAGAAAAAGTAGGC
GCGGACTGGGGGAAGTTTCAAGAAGAACGAGGATTTAGCTGCACCCTCCCGCAAACAATGATAGATCAAATCTCCCAACGCAAGTGGGAAACAGTTTGCGAGAATCCCCG
CTCCTACGCCTCTGCGCTAGTCCACGACTTCTACCGGACACAGTGGCAAGAAGAAGTCGACGAAGTTTTAGTGAGAGGCCACGCAGTCGCATTCTCCTCAGCATGCATCA
ACAATGTGTACGAGCTGCGAGATATCCCAAACGCAGAAGGGAATGCGCTCCTCGACTGCCTCGACGATGACTTCCTGAGTGCAATACTTCTTGCGGTAGCCCGACCTGGA
GCCAAGTGGGACGGTCACGGCACGACGAGGACCCTGAAGTCGCAGCTGCTCGACTTTGAGGCTACCTACTAG
Protein sequenceShow/hide protein sequence
MFNSQNFSVAGYADDASPSSPEVEGPIRDTISSPSEENENQAEADPMETEELEVINVEQTAMAEPSISAANPSEPTSPQFSEQEVATWNSLMGEFCEEGKEIHLPEELEK
AAAKETECKAAADEKTAKEREGTSKPAQDPVTAEIAATNLAIIAAALDVEASDFEDELPLTHRRNIQFEGVVIREPSEKPAAAPSKKRKAPTASKGKGKEKVGAGKEKVG
ADWGKFQEERGFSCTLPQTMIDQISQRKWETVCENPRSYASALVHDFYRTQWQEEVDEVLVRGHAVAFSSACINNVYELRDIPNAEGNALLDCLDDDFLSAILLAVARPG
AKWDGHGTTRTLKSQLLDFEATY